| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894745
Identifier: 190894745
GI number: 190894745
Start: 436123
End: 436875
Strand: Reverse
Name: 190894745
Synonym: RHECIAT_PC0000410
Alternate gene names: NA
Gene position: 436875-436123 (Counterclockwise)
Preceding gene: 190894753
Following gene: 190894744
Centisome position: 40.02
GC content: 61.09
Gene sequence:
>753_bases ATGAAGATCATGGTAGCGGGAGCAAGCGGCATTGTCGGAACGCAACTCACGGCGAAGCTGCGCCGGGCGGGCCACGATGT GACGGCCGCATCGTTATCGCTTGGCGTCGATACGGTGACGGGCAGGGGCCTCGAAGCGGCGATGGCGGGAAACGAAATCG TCATCGATGTCACCAATGCCGCATCATTCGGCGATAGTTCGGCATTCGATTTCTTCAGAACATCGACGAAGAATCTGCTC GCCGCTGCGGCCGGAGCCAATGTCAGGCACTATCTCGCGCTCTCGGTCGTCGGCACGCCCTGCCTCGTCGAAAGCGATTA TTTTCGCGCGAAACTGGTGCAGGAAAATCTCATCCGTGCTTCCGGCCGAGGCTACACGCTCCTCCGCTCGACGCAATTTT ACGAGTTCATCAACGGCTTGATCGAAATCGGTGCCGAAGGCGACGTCCTTCGCTTGCCCCCCGCGGCAATGCGGCCGGTC GCCGCCAGTGACGTCGCGGCGTTTCTGACGGAACTGGCAGCGGGAAGTCCCGTCGGCGATATCGTCGAGATCGCTGGCCC GGAACAGTTCGGAATCGACGAAATCGCGCGGATTTATCTCGCCGCAAACGAAGACCAGCGGCGGGTGATGACGGATCCGT CCGTTCCCTATTTCGACGTCGAATTGACCGGCAATGTGCTGCTTCCCGGTGCCGGCGCCCGCACGGCGAGCCAGACGCTC TCCAACTGGCTCTTCCAATCGATGGCCGCCTAA
Upstream 100 bases:
>100_bases AGGACTAGGACGCCGGACCTCCGGCACGATGGAAGCTCTCTGACTTTCCGGTCATTGTCGGCTGAACCGCGAGCATTAGG CTGAGATGGAGAGGGTCGAT
Downstream 100 bases:
>100_bases CGGCCCGTTTGAAATTGCGCGAGGTAATACCTTTCGAAAAGAAGGCATTACCGAGCTGCCAGAATGGCCACGACCGTTAC CGCCAAAGGGCAGGTCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Secreted Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; GCN5-Related N-Acetyltransferase; Transcriptional Regulator LysR-Family; LysR Family Transcriptional Regulator; NmrA-Like Protein; Nmra-Like Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNAASFGDSSAFDFFRTSTKNLL AAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRASGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPV AASDVAAFLTELAAGSPVGDIVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL SNWLFQSMAA
Sequences:
>Translated_250_residues MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNAASFGDSSAFDFFRTSTKNLL AAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRASGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPV AASDVAAFLTELAAGSPVGDIVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL SNWLFQSMAA >Mature_250_residues MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNAASFGDSSAFDFFRTSTKNLL AAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRASGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPV AASDVAAFLTELAAGSPVGDIVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL SNWLFQSMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26288; Mature: 26288
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNA CEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEEECCCEEEEEECCC ASFGDSSAFDFFRTSTKNLLAAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRA CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHC SGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPVAASDVAAFLTELAAGSPVGD CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCH IVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL HEEECCCCCCCHHHHHEEEEECCCCCCEEECCCCCCEEEEEEECCEEECCCCCHHHHHHH SNWLFQSMAA HHHHHHHHCC >Mature Secondary Structure MKIMVAGASGIVGTQLTAKLRRAGHDVTAASLSLGVDTVTGRGLEAAMAGNEIVIDVTNA CEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEEECCCEEEEEECCC ASFGDSSAFDFFRTSTKNLLAAAAGANVRHYLALSVVGTPCLVESDYFRAKLVQENLIRA CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHC SGRGYTLLRSTQFYEFINGLIEIGAEGDVLRLPPAAMRPVAASDVAAFLTELAAGSPVGD CCCCEEEEEHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCH IVEIAGPEQFGIDEIARIYLAANEDQRRVMTDPSVPYFDVELTGNVLLPGAGARTASQTL HEEECCCCCCCHHHHHEEEEECCCCCCEEECCCCCCEEEEEEECCEEECCCCCHHHHHHH SNWLFQSMAA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA