| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894744
Identifier: 190894744
GI number: 190894744
Start: 435838
End: 436059
Strand: Reverse
Name: 190894744
Synonym: RHECIAT_PC0000409
Alternate gene names: NA
Gene position: 436059-435838 (Counterclockwise)
Preceding gene: 190894745
Following gene: 190894743
Centisome position: 39.95
GC content: 61.26
Gene sequence:
>222_bases ATGGCCACGACCGTTACCGCCAAAGGGCAGGTCCCCATCCCGAAACCGGTCCGGGACATGCTCGGCATCGTTGCCGGCAG CAAGGTCGATTTTCATCGCGCTGCCGATGGCCGGGTGGTTCTGGTGCGCGCTGTCGACGCAGGGTGTCGGGCGCTATCGC ACTTATTTCCCCTCCCTGAAATTGATATCGCCGGATCTTTAAGCTGGCGTTTTGCGGCGTGA
Upstream 100 bases:
>100_bases GCTCTCCAACTGGCTCTTCCAATCGATGGCCGCCTAACGGCCCGTTTGAAATTGCGCGAGGTAATACCTTTCGAAAAGAA GGCATTACCGAGCTGCCAGA
Downstream 100 bases:
>100_bases GCCAGATTTCAAAAAATCTTCATGAAGCCCAAGGTTGAAAATCTCCGGTCCTGCTCCAAGTCCGGTCGGCGGTCGCCGAA ACGGCAGGGGAGGGGCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MATTVTAKGQVPIPKPVRDMLGIVAGSKVDFHRAADGRVVLVRAVDAGCRALSHLFPLPEIDIAGSLSWRFAA
Sequences:
>Translated_73_residues MATTVTAKGQVPIPKPVRDMLGIVAGSKVDFHRAADGRVVLVRAVDAGCRALSHLFPLPEIDIAGSLSWRFAA >Mature_72_residues ATTVTAKGQVPIPKPVRDMLGIVAGSKVDFHRAADGRVVLVRAVDAGCRALSHLFPLPEIDIAGSLSWRFAA
Specific function: Unknown
COG id: COG2002
COG function: function code K; Regulators of stationary/sporulation gene expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7725; Mature: 7594
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTVTAKGQVPIPKPVRDMLGIVAGSKVDFHRAADGRVVLVRAVDAGCRALSHLFPLPE CCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCCCCC IDIAGSLSWRFAA CCCCCCCEEEECC >Mature Secondary Structure ATTVTAKGQVPIPKPVRDMLGIVAGSKVDFHRAADGRVVLVRAVDAGCRALSHLFPLPE CCEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCCCCC IDIAGSLSWRFAA CCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA