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The map label for this gene is repAc1 [H]

Identifier: 190894742

GI number: 190894742

Start: 432958

End: 434151

Strand: Reverse

Name: repAc1 [H]

Synonym: RHECIAT_PC0000407

Alternate gene names: 190894742

Gene position: 434151-432958 (Counterclockwise)

Preceding gene: 190894743

Following gene: 190894741

Centisome position: 39.77

GC content: 59.97

Gene sequence:

>1194_bases
ATGCAGCCGAGTCTTGCTCTTCAAGACGATCAAGAGCATCTCCCGTCGCTTCTGGCAACAGATGCGAAGGAGTTGTCCTA
TCAGCTTCAGCAGCATCAGGCAAAAATCTTCCCGCCGCTTTCCCAGAAGACGATCCGCACTTTCTCGCCGGCGGAAGCGG
CAGCCTTCATCGGCATCGGCGAAGGTTATCTCAGGCAGGTCGCCGCCGACGGCCACGGGCCCGATCCGCTCGCAAACGGA
CGCCGGCTTTACAGCGCAACCGACATGGACCGGATCCGCCGCGTTCTCGACGAGCGAAACGGAACGCCGAAATATGTGCC
CGCCCGCAGGCCTGGAGAAAAGCTCCAGATCGTCTCTGTCATGAATTTCAAGGGCGGTTCGGGCAAGACCACCACGGCTG
CTCATCTGGCGCAGTTCATGGCGCTGCGCGGTTACCGCGTGCTTGCCGTCGACCTCGATCCGCAGGCCTCCCTATCCGCC
TTGTTCGGCCATCAGCCGGAGTTCGACGTCGGCGAAGGCGAGACGATCTACGGGGCGATCCGATACGAGGAACCACGCCC
AATCGCCGATATCGTGCGCGCAACCTATACGCCCAATCTGCATCTCATTCCGGGAAATCTCGAATTGATGGAATTCGAGC
ATGAGACGCCGAAGGCGATGGCTTCCGGAAGGGCGGAGACGATGTTCTTTGCGCGTATCGGCGAGGTGCTGACCGAGATC
GAAAGCCTTTACGACGTCGTTGTCGTCGATTGCCCGCCGCAGTTGGGATTCCTGACGATGTCGGCGCTCTGCGCAGCGAC
CTCGGTATTGATCACGGTCCACCCGCAGATGCTCGACGTCATGTCGATGTCGCAGTTTCTGACGATGACAAGTGAACTGA
TGTCGGTCGTCGAAAGGGCCGGCGGGCGCACCAGCTATGACTGGATGCGCTATCTTGTGACGCGCTTCGAGCCGAACGAC
GGGCCGCAGAGCCAGATGACCGGCTTCATGCGGGCGATCTTCGGTAATCGAATGCTTCACAACGCCATGGTGAAGTCGAC
AGCGGTTGCCGACGCCGGCGTCACCAAGCAGACGCTTTACGAGGTCGAGCGGTCTCAATTCACTCGCGGAACCTACGACC
GGGCGCTGGAATCGCTCAATCTCGTGAACAGCGAGATCGAGGCGCATATTCGCTCGACCTGGGGAAGGAAATAG

Upstream 100 bases:

>100_bases
CGGTTAACCATTTGTAATTCGCTCACGAATCGCGGCATATAGTAACTGCGCAACTGAAGCGCTTTCGTTCAAAATTGCGC
AGTTACTTGGGAAAACGATC

Downstream 100 bases:

>100_bases
ATAGATGGCGCGCAAGAACCTGATCGAGATTTCCGCCCCGAACCCGGCAAGGGTGGAAGCGGTCGCACCGCGCGACAATC
GTCCGATTGCAGGCTTCGTG

Product: plasmid partitioning protein RepAc1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MQPSLALQDDQEHLPSLLATDAKELSYQLQQHQAKIFPPLSQKTIRTFSPAEAAAFIGIGEGYLRQVAADGHGPDPLANG
RRLYSATDMDRIRRVLDERNGTPKYVPARRPGEKLQIVSVMNFKGGSGKTTTAAHLAQFMALRGYRVLAVDLDPQASLSA
LFGHQPEFDVGEGETIYGAIRYEEPRPIADIVRATYTPNLHLIPGNLELMEFEHETPKAMASGRAETMFFARIGEVLTEI
ESLYDVVVVDCPPQLGFLTMSALCAATSVLITVHPQMLDVMSMSQFLTMTSELMSVVERAGGRTSYDWMRYLVTRFEPND
GPQSQMTGFMRAIFGNRMLHNAMVKSTAVADAGVTKQTLYEVERSQFTRGTYDRALESLNLVNSEIEAHIRSTWGRK

Sequences:

>Translated_397_residues
MQPSLALQDDQEHLPSLLATDAKELSYQLQQHQAKIFPPLSQKTIRTFSPAEAAAFIGIGEGYLRQVAADGHGPDPLANG
RRLYSATDMDRIRRVLDERNGTPKYVPARRPGEKLQIVSVMNFKGGSGKTTTAAHLAQFMALRGYRVLAVDLDPQASLSA
LFGHQPEFDVGEGETIYGAIRYEEPRPIADIVRATYTPNLHLIPGNLELMEFEHETPKAMASGRAETMFFARIGEVLTEI
ESLYDVVVVDCPPQLGFLTMSALCAATSVLITVHPQMLDVMSMSQFLTMTSELMSVVERAGGRTSYDWMRYLVTRFEPND
GPQSQMTGFMRAIFGNRMLHNAMVKSTAVADAGVTKQTLYEVERSQFTRGTYDRALESLNLVNSEIEAHIRSTWGRK
>Mature_397_residues
MQPSLALQDDQEHLPSLLATDAKELSYQLQQHQAKIFPPLSQKTIRTFSPAEAAAFIGIGEGYLRQVAADGHGPDPLANG
RRLYSATDMDRIRRVLDERNGTPKYVPARRPGEKLQIVSVMNFKGGSGKTTTAAHLAQFMALRGYRVLAVDLDPQASLSA
LFGHQPEFDVGEGETIYGAIRYEEPRPIADIVRATYTPNLHLIPGNLELMEFEHETPKAMASGRAETMFFARIGEVLTEI
ESLYDVVVVDCPPQLGFLTMSALCAATSVLITVHPQMLDVMSMSQFLTMTSELMSVVERAGGRTSYDWMRYLVTRFEPND
GPQSQMTGFMRAIFGNRMLHNAMVKSTAVADAGVTKQTLYEVERSQFTRGTYDRALESLNLVNSEIEAHIRSTWGRK

Specific function: This protein is coded by a hairy root Ri plasmid. It is possibly involved in regulating the plasmid copy-number [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017818 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 44111; Mature: 44111

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSLALQDDQEHLPSLLATDAKELSYQLQQHQAKIFPPLSQKTIRTFSPAEAAAFIGIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHEEECC
EGYLRQVAADGHGPDPLANGRRLYSATDMDRIRRVLDERNGTPKYVPARRPGEKLQIVSV
HHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
MNFKGGSGKTTTAAHLAQFMALRGYRVLAVDLDPQASLSALFGHQPEFDVGEGETIYGAI
EECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEE
RYEEPRPIADIVRATYTPNLHLIPGNLELMEFEHETPKAMASGRAETMFFARIGEVLTEI
EECCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHH
ESLYDVVVVDCPPQLGFLTMSALCAATSVLITVHPQMLDVMSMSQFLTMTSELMSVVERA
HHHHCEEEEECCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHC
GGRTSYDWMRYLVTRFEPNDGPQSQMTGFMRAIFGNRMLHNAMVKSTAVADAGVTKQTLY
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EVERSQFTRGTYDRALESLNLVNSEIEAHIRSTWGRK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQPSLALQDDQEHLPSLLATDAKELSYQLQQHQAKIFPPLSQKTIRTFSPAEAAAFIGIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHEEECC
EGYLRQVAADGHGPDPLANGRRLYSATDMDRIRRVLDERNGTPKYVPARRPGEKLQIVSV
HHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
MNFKGGSGKTTTAAHLAQFMALRGYRVLAVDLDPQASLSALFGHQPEFDVGEGETIYGAI
EECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEE
RYEEPRPIADIVRATYTPNLHLIPGNLELMEFEHETPKAMASGRAETMFFARIGEVLTEI
EECCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHH
ESLYDVVVVDCPPQLGFLTMSALCAATSVLITVHPQMLDVMSMSQFLTMTSELMSVVERA
HHHHCEEEEECCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHC
GGRTSYDWMRYLVTRFEPNDGPQSQMTGFMRAIFGNRMLHNAMVKSTAVADAGVTKQTLY
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EVERSQFTRGTYDRALESLNLVNSEIEAHIRSTWGRK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA