| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894708
Identifier: 190894708
GI number: 190894708
Start: 396859
End: 397866
Strand: Reverse
Name: 190894708
Synonym: RHECIAT_PC0000373
Alternate gene names: NA
Gene position: 397866-396859 (Counterclockwise)
Preceding gene: 190894709
Following gene: 190894706
Centisome position: 36.45
GC content: 63.19
Gene sequence:
>1008_bases ATGACAGAGACCCGTTTGCGGCCGTCGCCGATCAGCGCGACGGTCGATTTCACCGCCGAGGGCGTCCAGCACGGTTTCCT CAGGCTGCCTTACAGCCGCGACGACTCCGCCTGGGGATCGGTGATGATCCCGATAACGGTTGCCAGGAACGGCAAGGGAC CGACGGCGCTACTGACCGGCGGCAATCACGGCGACGAATATGAGGGGCCGATCGCGCTGTTCGATCTCGCCCGTTCGCTG AAGCCTGAAGAGGTAAGCGGCGCCGTTATCATCGTACCGGCCATGAATTTTCCGGCGTTTCTGGCCGGCACGAGGACGTC GCCGGTCGACAGAGGCAATATGAACCGCAGTTTCCCCGGTCGGCCGGACGGGACGGTGACCGAGAAGATCGCCGACTATT TCCAGCGAGTGCTTCTGCCGATGGCGGATCTCGTCCTCGACTTCCATTCCGGCGGCAAGACGCTCGATTTTCTGCCCTTC TGTGCGGCGCATATCCTGCCCAACAAACAGCAACAGGAAAAAGCGTTCGAATTCGTCACGGCGTTTGCCGCACCCTATTC GATGCAGATGCTGGAGATTGATGCGGTCGGCATGTACGACACGGCGGCCGAGGAAATGGGCAAGATTTTCATCACGACCG AACTCGGCGGCGGCGGTACCGCGACCGCCAGGAGTGCGGCGATTGCCAAACGCGGCGTGATGAACGTGCTGCGACATGCG GGGATCGTCGCCGGCGCCGTCGATAGCCGTCAGACGATTTGGCTCGACATGCCGGATGGCCGCTGCTTCTCCTTCGCGGA GGACGGTGGATTGATCGAACCCGCCATCGACCTCGGTGACGTCGTCACAGAGGGAGCGGTCATCGCTCGCATCCATCCGA CCGGGCGGACCGGTGAGGCGCCGCGCGAGATCCGCGCCGCCATGGACGGCATTCTCTGCGCCCGGCACTTTCCGGGGCTG GTCAAATCGGGCGACTGCGTTGCGGTGATGGCGATCGTGACGAGCTGA
Upstream 100 bases:
>100_bases ATGGGGTTCGAGACGACGGAGAGCATCCTCATCACCGAAAGCGGCGTCGAGTGCCTCGCCAACGTGCCGCGCAAGCTGAT GGTCAAGGATTGAGGCTGTC
Downstream 100 bases:
>100_bases TATCACGGGCATGCCGCGCCGGGATGGTTTCGACCGCCGATCGCGTCAGGCCGCTTTCGGCGATCGCGACCCGGCAGTTG CCGCATCGATCTGAAAGCGG
Product: putative succinylglutamate desuccinylase/aspartoacylase family protein
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamatedesuccinylase/Aspartoacylase; Succinylglutamate Desuccinylase; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTETRLRPSPISATVDFTAEGVQHGFLRLPYSRDDSAWGSVMIPITVARNGKGPTALLTGGNHGDEYEGPIALFDLARSL KPEEVSGAVIIVPAMNFPAFLAGTRTSPVDRGNMNRSFPGRPDGTVTEKIADYFQRVLLPMADLVLDFHSGGKTLDFLPF CAAHILPNKQQQEKAFEFVTAFAAPYSMQMLEIDAVGMYDTAAEEMGKIFITTELGGGGTATARSAAIAKRGVMNVLRHA GIVAGAVDSRQTIWLDMPDGRCFSFAEDGGLIEPAIDLGDVVTEGAVIARIHPTGRTGEAPREIRAAMDGILCARHFPGL VKSGDCVAVMAIVTS
Sequences:
>Translated_335_residues MTETRLRPSPISATVDFTAEGVQHGFLRLPYSRDDSAWGSVMIPITVARNGKGPTALLTGGNHGDEYEGPIALFDLARSL KPEEVSGAVIIVPAMNFPAFLAGTRTSPVDRGNMNRSFPGRPDGTVTEKIADYFQRVLLPMADLVLDFHSGGKTLDFLPF CAAHILPNKQQQEKAFEFVTAFAAPYSMQMLEIDAVGMYDTAAEEMGKIFITTELGGGGTATARSAAIAKRGVMNVLRHA GIVAGAVDSRQTIWLDMPDGRCFSFAEDGGLIEPAIDLGDVVTEGAVIARIHPTGRTGEAPREIRAAMDGILCARHFPGL VKSGDCVAVMAIVTS >Mature_334_residues TETRLRPSPISATVDFTAEGVQHGFLRLPYSRDDSAWGSVMIPITVARNGKGPTALLTGGNHGDEYEGPIALFDLARSLK PEEVSGAVIIVPAMNFPAFLAGTRTSPVDRGNMNRSFPGRPDGTVTEKIADYFQRVLLPMADLVLDFHSGGKTLDFLPFC AAHILPNKQQQEKAFEFVTAFAAPYSMQMLEIDAVGMYDTAAEEMGKIFITTELGGGGTATARSAAIAKRGVMNVLRHAG IVAGAVDSRQTIWLDMPDGRCFSFAEDGGLIEPAIDLGDVVTEGAVIARIHPTGRTGEAPREIRAAMDGILCARHFPGLV KSGDCVAVMAIVTS
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35726; Mature: 35595
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETRLRPSPISATVDFTAEGVQHGFLRLPYSRDDSAWGSVMIPITVARNGKGPTALLTG CCCCCCCCCCCEEEEEEEHHHHCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEC GNHGDEYEGPIALFDLARSLKPEEVSGAVIIVPAMNFPAFLAGTRTSPVDRGNMNRSFPG CCCCCCCCCCCHHHHHHHHCCCCHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCC RPDGTVTEKIADYFQRVLLPMADLVLDFHSGGKTLDFLPFCAAHILPNKQQQEKAFEFVT CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHH AFAAPYSMQMLEIDAVGMYDTAAEEMGKIFITTELGGGGTATARSAAIAKRGVMNVLRHA HHHCCCEEEEEEEECCCCCHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC GIVAGAVDSRQTIWLDMPDGRCFSFAEDGGLIEPAIDLGDVVTEGAVIARIHPTGRTGEA CEEEECCCCCCEEEEECCCCCEEEEECCCCEECCCCCHHHHHHCCEEEEEECCCCCCCCC PREIRAAMDGILCARHFPGLVKSGDCVAVMAIVTS HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TETRLRPSPISATVDFTAEGVQHGFLRLPYSRDDSAWGSVMIPITVARNGKGPTALLTG CCCCCCCCCCEEEEEEEHHHHCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEC GNHGDEYEGPIALFDLARSLKPEEVSGAVIIVPAMNFPAFLAGTRTSPVDRGNMNRSFPG CCCCCCCCCCCHHHHHHHHCCCCHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCC RPDGTVTEKIADYFQRVLLPMADLVLDFHSGGKTLDFLPFCAAHILPNKQQQEKAFEFVT CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHH AFAAPYSMQMLEIDAVGMYDTAAEEMGKIFITTELGGGGTATARSAAIAKRGVMNVLRHA HHHCCCEEEEEEEECCCCCHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC GIVAGAVDSRQTIWLDMPDGRCFSFAEDGGLIEPAIDLGDVVTEGAVIARIHPTGRTGEA CEEEECCCCCCEEEEECCCCCEEEEECCCCEECCCCCHHHHHHCCEEEEEECCCCCCCCC PREIRAAMDGILCARHFPGLVKSGDCVAVMAIVTS HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA