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The map label for this gene is ygiB [C]

Identifier: 190894689

GI number: 190894689

Start: 379465

End: 380055

Strand: Reverse

Name: ygiB [C]

Synonym: RHECIAT_PC0000352

Alternate gene names: 190894689

Gene position: 380055-379465 (Counterclockwise)

Preceding gene: 190894690

Following gene: 190894688

Centisome position: 34.82

GC content: 63.45

Gene sequence:

>591_bases
ATGAGCGGGCACAGGCGACCTTTCCTGGCCCTTGGCACCATCGCTGCCTCGACCCTGGCACTGTCCGGCTGCGGCGATGA
CACTCCTTCGGATATAATGTTCACGTCGGTCGACCAATGCGTGACCGCCGGGATGGACCGGCAGGTCTGCCAGGCCAGTT
ATCAGGATGCAATGCGCGCCCACCTCGCCACCGCGCCGCGTTTCGACGGCATGGCTGCGTGCGAAGCCGAATACGGCAAG
GGTCAGTGCACGGAACAATCGGCCAACGCTCTGCCCAACAACACCGGCGGGAGCGGCAGCGTCTTCATGCCCTTCCTGGC
AGGCTACATGCTGTCCTCGGCATTGAACAACGTCAGCGATTATTACGATTATCGCCGGCGCCAGGAGGAAGCCGGCTACT
ATTACGGCTCGACGCCGATCTATCGCAATCGCTCGGGGCAGACGCTGACGACCACCGTACGTTCGGGCGGCATGCGCAGC
GACAGCGTGACTGCGCCTTCGCGCCAAAGTGTCAAGCCGGTCAACGTCAATACCCGCACCGTCGCCCGGCAGGGCTTCGG
TGGCCGTTCGTCCTTCAGTTTCGGCGGCTGA

Upstream 100 bases:

>100_bases
ATATCGCCGCCGGCCTATGGGGCGGCGGAATCGCCCTCGTCATCGGCATTCTCAACGCCGCCTGCATGACCTATTGAGGG
AGGGAAAGATGCGCAGACGC

Downstream 100 bases:

>100_bases
CATGAAGCGCATCACTCTTCCTGCGCGTCCCGATTGGCGTGACAAGGCGCGCGCCGTCGGCTTCGGATTTCACGTCATGT
ATGGCGAGCCCTACTGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSGHRRPFLALGTIAASTLALSGCGDDTPSDIMFTSVDQCVTAGMDRQVCQASYQDAMRAHLATAPRFDGMAACEAEYGK
GQCTEQSANALPNNTGGSGSVFMPFLAGYMLSSALNNVSDYYDYRRRQEEAGYYYGSTPIYRNRSGQTLTTTVRSGGMRS
DSVTAPSRQSVKPVNVNTRTVARQGFGGRSSFSFGG

Sequences:

>Translated_196_residues
MSGHRRPFLALGTIAASTLALSGCGDDTPSDIMFTSVDQCVTAGMDRQVCQASYQDAMRAHLATAPRFDGMAACEAEYGK
GQCTEQSANALPNNTGGSGSVFMPFLAGYMLSSALNNVSDYYDYRRRQEEAGYYYGSTPIYRNRSGQTLTTTVRSGGMRS
DSVTAPSRQSVKPVNVNTRTVARQGFGGRSSFSFGG
>Mature_195_residues
SGHRRPFLALGTIAASTLALSGCGDDTPSDIMFTSVDQCVTAGMDRQVCQASYQDAMRAHLATAPRFDGMAACEAEYGKG
QCTEQSANALPNNTGGSGSVFMPFLAGYMLSSALNNVSDYYDYRRRQEEAGYYYGSTPIYRNRSGQTLTTTVRSGGMRSD
SVTAPSRQSVKPVNVNTRTVARQGFGGRSSFSFGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20961; Mature: 20830

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHRRPFLALGTIAASTLALSGCGDDTPSDIMFTSVDQCVTAGMDRQVCQASYQDAMRA
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLATAPRFDGMAACEAEYGKGQCTEQSANALPNNTGGSGSVFMPFLAGYMLSSALNNVSD
HHHCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YYDYRRRQEEAGYYYGSTPIYRNRSGQTLTTTVRSGGMRSDSVTAPSRQSVKPVNVNTRT
HHHHHHHHHHCCEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
VARQGFGGRSSFSFGG
HHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SGHRRPFLALGTIAASTLALSGCGDDTPSDIMFTSVDQCVTAGMDRQVCQASYQDAMRA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HLATAPRFDGMAACEAEYGKGQCTEQSANALPNNTGGSGSVFMPFLAGYMLSSALNNVSD
HHHCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YYDYRRRQEEAGYYYGSTPIYRNRSGQTLTTTVRSGGMRSDSVTAPSRQSVKPVNVNTRT
HHHHHHHHHHCCEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
VARQGFGGRSSFSFGG
HHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA