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The map label for this gene is ygiC [H]

Identifier: 190894688

GI number: 190894688

Start: 378306

End: 379463

Strand: Reverse

Name: ygiC [H]

Synonym: RHECIAT_PC0000351

Alternate gene names: 190894688

Gene position: 379463-378306 (Counterclockwise)

Preceding gene: 190894689

Following gene: 190894687

Centisome position: 34.76

GC content: 59.76

Gene sequence:

>1158_bases
ATGAAGCGCATCACTCTTCCTGCGCGTCCCGATTGGCGTGACAAGGCGCGCGCCGTCGGCTTCGGATTTCACGTCATGTA
TGGCGAGCCCTACTGGCTCGACGATGCCGCCTATACGTTCACACTGGATGAGATCGAGACGCAGATCGAAGAGCCGAGCC
AGCAACTGCACGATATGTGCATGGATCTGGTCGGTGATATCGTCGGCAGCGAAGAGTCGCTCGACCGGCTGGCCATTCCG
GAGGATCTGCGGGATGTGGTGCAGCGATCCTGGCAGCGCCGCGACCGGCACCTCTACGGCCGCTTCGATCTTGCCTATGA
CGGCAACGGCCCAGCCAAGCTGCTCGAATACAACGCGGATACTCCGACCTCCGTCTTCGAGACCGCCTATTTTCAGTTCA
ACTGGCTGACCGACCAGATCGCTTTGGGTGTTCTGCCGAAGGAGGCGGACCAGTATAATTTCCTGCAGGAGAGCCTTGTC
GAGGCATTCGACCAGTTCCCCAAGGAGTCGATCTTCCATTTCGCGGCGATAACCGACAATGAGGAGGATCGCGGCACGAC
GGTCTATCTGATGGACTGTGCGGTGCAGGCCGGCCATCGCGTCGAGCTTCTCGACATTCGCGAGATCGGCATCGATGCTG
AGGGCCGCTACACCGATCTCAAGGATCGGGTGATCGATCGCTGCTTCAAGCTGTACCCATGGGAATTCATGCTGCGCGAG
CCGTTCGCCCGCGAACTCGCGCGCTCGTGCGATGTTTTCGTCGAACCCGCCTGGAAGGCCGTGCTTTCCAACAAAGGGCT
TCTGCCTCTGCTCTGGCAACGTCACCCCAATCACCCCAATCTGCTGCCCAGCTATTTCACCGACGACCCGGCGGCTTCGA
CCTTGACCGACTATGTGCGCAAGCCGCTATTGTCGCGAGAAGGCGAAAATGTCACGATCTTTCGAGAGGGGCAGGAACTG
GTTTCTGCTCCGGGCGATTACGGCGACGAAGGTTTCGTCATCCAAGCCTATGCCCCGCTTTTCGAAAGCGACGGCGGCTT
TGCCGTGCTCGGCAGCTGGGTCGCCGGCGATCGCGCCTGCGGCCTTGCCGTGCGCGAGGATCGCTCACGAATAACGGCCA
ATCTGTCGCGTTTCGTGCCGCACATTATAATGGAGTAA

Upstream 100 bases:

>100_bases
GCGCCTTCGCGCCAAAGTGTCAAGCCGGTCAACGTCAATACCCGCACCGTCGCCCGGCAGGGCTTCGGTGGCCGTTCGTC
CTTCAGTTTCGGCGGCTGAC

Downstream 100 bases:

>100_bases
AATTCCATTACGTGCGTAGCATATCGCGTATTCAACCCAATCCTTGCCACAAGAGGGCCTGTCATAGACACGGCGAGCAA
GGCCGCAAATGAGGGGAGAA

Product: putative glutathionylspermidine synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKRITLPARPDWRDKARAVGFGFHVMYGEPYWLDDAAYTFTLDEIETQIEEPSQQLHDMCMDLVGDIVGSEESLDRLAIP
EDLRDVVQRSWQRRDRHLYGRFDLAYDGNGPAKLLEYNADTPTSVFETAYFQFNWLTDQIALGVLPKEADQYNFLQESLV
EAFDQFPKESIFHFAAITDNEEDRGTTVYLMDCAVQAGHRVELLDIREIGIDAEGRYTDLKDRVIDRCFKLYPWEFMLRE
PFARELARSCDVFVEPAWKAVLSNKGLLPLLWQRHPNHPNLLPSYFTDDPAASTLTDYVRKPLLSREGENVTIFREGQEL
VSAPGDYGDEGFVIQAYAPLFESDGGFAVLGSWVAGDRACGLAVREDRSRITANLSRFVPHIIME

Sequences:

>Translated_385_residues
MKRITLPARPDWRDKARAVGFGFHVMYGEPYWLDDAAYTFTLDEIETQIEEPSQQLHDMCMDLVGDIVGSEESLDRLAIP
EDLRDVVQRSWQRRDRHLYGRFDLAYDGNGPAKLLEYNADTPTSVFETAYFQFNWLTDQIALGVLPKEADQYNFLQESLV
EAFDQFPKESIFHFAAITDNEEDRGTTVYLMDCAVQAGHRVELLDIREIGIDAEGRYTDLKDRVIDRCFKLYPWEFMLRE
PFARELARSCDVFVEPAWKAVLSNKGLLPLLWQRHPNHPNLLPSYFTDDPAASTLTDYVRKPLLSREGENVTIFREGQEL
VSAPGDYGDEGFVIQAYAPLFESDGGFAVLGSWVAGDRACGLAVREDRSRITANLSRFVPHIIME
>Mature_385_residues
MKRITLPARPDWRDKARAVGFGFHVMYGEPYWLDDAAYTFTLDEIETQIEEPSQQLHDMCMDLVGDIVGSEESLDRLAIP
EDLRDVVQRSWQRRDRHLYGRFDLAYDGNGPAKLLEYNADTPTSVFETAYFQFNWLTDQIALGVLPKEADQYNFLQESLV
EAFDQFPKESIFHFAAITDNEEDRGTTVYLMDCAVQAGHRVELLDIREIGIDAEGRYTDLKDRVIDRCFKLYPWEFMLRE
PFARELARSCDVFVEPAWKAVLSNKGLLPLLWQRHPNHPNLLPSYFTDDPAASTLTDYVRKPLLSREGENVTIFREGQEL
VSAPGDYGDEGFVIQAYAPLFESDGGFAVLGSWVAGDRACGLAVREDRSRITANLSRFVPHIIME

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=388, Percent_Identity=46.9072164948454, Blast_Score=387, Evalue=1e-109,
Organism=Escherichia coli, GI1790629, Length=385, Percent_Identity=48.0519480519481, Blast_Score=363, Evalue=1e-101,
Organism=Escherichia coli, GI1789361, Length=375, Percent_Identity=26.1333333333333, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44100; Mature: 44100

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRITLPARPDWRDKARAVGFGFHVMYGEPYWLDDAAYTFTLDEIETQIEEPSQQLHDMC
CCCCCCCCCCCHHHHHHHEEEEEEEEECCCEEECCCEEEEEHHHHHHHHHCHHHHHHHHH
MDLVGDIVGSEESLDRLAIPEDLRDVVQRSWQRRDRHLYGRFDLAYDGNGPAKLLEYNAD
HHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEEECCC
TPTSVFETAYFQFNWLTDQIALGVLPKEADQYNFLQESLVEAFDQFPKESIFHFAAITDN
CCHHHHHHHHEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEEEEECCC
EEDRGTTVYLMDCAVQAGHRVELLDIREIGIDAEGRYTDLKDRVIDRCFKLYPWEFMLRE
CCCCCCEEEEEEEECCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCC
PFARELARSCDVFVEPAWKAVLSNKGLLPLLWQRHPNHPNLLPSYFTDDPAASTLTDYVR
HHHHHHHHHCCEEECHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
KPLLSREGENVTIFREGQELVSAPGDYGDEGFVIQAYAPLFESDGGFAVLGSWVAGDRAC
HHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECHHCCCCCC
GLAVREDRSRITANLSRFVPHIIME
CCEEHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRITLPARPDWRDKARAVGFGFHVMYGEPYWLDDAAYTFTLDEIETQIEEPSQQLHDMC
CCCCCCCCCCCHHHHHHHEEEEEEEEECCCEEECCCEEEEEHHHHHHHHHCHHHHHHHHH
MDLVGDIVGSEESLDRLAIPEDLRDVVQRSWQRRDRHLYGRFDLAYDGNGPAKLLEYNAD
HHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEEECCC
TPTSVFETAYFQFNWLTDQIALGVLPKEADQYNFLQESLVEAFDQFPKESIFHFAAITDN
CCHHHHHHHHEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHEEEEEECCC
EEDRGTTVYLMDCAVQAGHRVELLDIREIGIDAEGRYTDLKDRVIDRCFKLYPWEFMLRE
CCCCCCEEEEEEEECCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCC
PFARELARSCDVFVEPAWKAVLSNKGLLPLLWQRHPNHPNLLPSYFTDDPAASTLTDYVR
HHHHHHHHHCCEEECHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
KPLLSREGENVTIFREGQELVSAPGDYGDEGFVIQAYAPLFESDGGFAVLGSWVAGDRAC
HHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECHHCCCCCC
GLAVREDRSRITANLSRFVPHIIME
CCEEHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]