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The map label for this gene is ugpA [C]

Identifier: 190894666

GI number: 190894666

Start: 354653

End: 355519

Strand: Reverse

Name: ugpA [C]

Synonym: RHECIAT_PC0000329

Alternate gene names: 190894666

Gene position: 355519-354653 (Counterclockwise)

Preceding gene: 190894667

Following gene: 190894665

Centisome position: 32.57

GC content: 54.9

Gene sequence:

>867_bases
ATGGAAAAAACCTGGAACAACAAAGCGTGGTTTCTGGTCCTGCCGGTCCTCGTGCTGGTGGCATTCTCGGCCGTCATTCC
CTTGATGACGGTTGTGAACTATTCCGTTCAGGACACTTTCGGAAACAACCAGTTCTTCTGGAACGGAACGGACTGGTTTA
CCCAAGTCCTGCATTCCGACCGTTTCTGGGCCGCCCTGCAGCGAAACCTGATTTTTTCGTTGATCATTCTCGCGCTTGAG
ATCCCGCTCGGTATCTTCATTGCGCTCAACATGCCGAAATCGGGCATTGGCGTGCCGGTGTGCCTGGTTCTGATGGCACT
GCCGCTGCTGATCCCGTGGAACGTTGTCGGCACGATCTGGCAGGTGTTCGGCCGCAACGACATTGGTTTGTTCGGCTATT
ACATCAATGCCATCGGTATCGATTACAACTATGTGCAGGATCCGCTCGACGCCTGGGTGACCATCATCATCATGGATGTC
TGGCACTGGACGAGCCTGGTCGTCTTGCTCTGCTATGCTGGCCTCGTTTCCATTCCAGATGCCTTCTATCAGGCAGCCAA
GATCGACGGTGCGTCTCGTTGGGCCGTGTTCCGCTATATCCAGCTGCCAAAGATGAAGCGCGTTCTTCTGATCGCCGTGC
TGCTGCGTTTCATGGATAGTTTCATGATCTACACCGAGCCGTTTGTCGTTACCGGCGGCGGTCCGGGCAACTCGACCACT
TTCCTGTCGATCGATCTGGTCAAAACCGCGCTCGGACAGTTTGACCTCGGTCCGGCCGCTGCCATGTCGCTGATCTATTT
CCTCATCATCCTGCTGCTTTCGTGGGTGTTCTACACCGTCATGACAAGCCACGACGCGGAGAATTGA

Upstream 100 bases:

>100_bases
CTGAGGACGAAGAAATTCCGGCTGATCCCCGGGTGACCTTCGAGCCGTCGGGTATCAGTATCTATGCCGACTCTTGGCGC
GCTGGACCGGAGGCTTGATC

Downstream 100 bases:

>100_bases
AATGAGCGCCTCCAACGAAACGACAGCGAGCCGAAAAATCTCGGGCGTTACCAATGTCGCAAGCGGTCTCTCCTCCGATG
AGGTCAGCCGTCTGATGCGC

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MEKTWNNKAWFLVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNQFFWNGTDWFTQVLHSDRFWAALQRNLIFSLIILALE
IPLGIFIALNMPKSGIGVPVCLVLMALPLLIPWNVVGTIWQVFGRNDIGLFGYYINAIGIDYNYVQDPLDAWVTIIIMDV
WHWTSLVVLLCYAGLVSIPDAFYQAAKIDGASRWAVFRYIQLPKMKRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
FLSIDLVKTALGQFDLGPAAAMSLIYFLIILLLSWVFYTVMTSHDAEN

Sequences:

>Translated_288_residues
MEKTWNNKAWFLVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNQFFWNGTDWFTQVLHSDRFWAALQRNLIFSLIILALE
IPLGIFIALNMPKSGIGVPVCLVLMALPLLIPWNVVGTIWQVFGRNDIGLFGYYINAIGIDYNYVQDPLDAWVTIIIMDV
WHWTSLVVLLCYAGLVSIPDAFYQAAKIDGASRWAVFRYIQLPKMKRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
FLSIDLVKTALGQFDLGPAAAMSLIYFLIILLLSWVFYTVMTSHDAEN
>Mature_288_residues
MEKTWNNKAWFLVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNQFFWNGTDWFTQVLHSDRFWAALQRNLIFSLIILALE
IPLGIFIALNMPKSGIGVPVCLVLMALPLLIPWNVVGTIWQVFGRNDIGLFGYYINAIGIDYNYVQDPLDAWVTIIIMDV
WHWTSLVVLLCYAGLVSIPDAFYQAAKIDGASRWAVFRYIQLPKMKRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
FLSIDLVKTALGQFDLGPAAAMSLIYFLIILLLSWVFYTVMTSHDAEN

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787570, Length=230, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790465, Length=243, Percent_Identity=27.5720164609054, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32496; Mature: 32496

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTWNNKAWFLVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNQFFWNGTDWFTQVLHSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCHHHHHHHHHCC
RFWAALQRNLIFSLIILALEIPLGIFIALNMPKSGIGVPVCLVLMALPLLIPWNVVGTIW
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QVFGRNDIGLFGYYINAIGIDYNYVQDPLDAWVTIIIMDVWHWTSLVVLLCYAGLVSIPD
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AFYQAAKIDGASRWAVFRYIQLPKMKRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCCCE
FLSIDLVKTALGQFDLGPAAAMSLIYFLIILLLSWVFYTVMTSHDAEN
EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEKTWNNKAWFLVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNQFFWNGTDWFTQVLHSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCHHHHHHHHHCC
RFWAALQRNLIFSLIILALEIPLGIFIALNMPKSGIGVPVCLVLMALPLLIPWNVVGTIW
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QVFGRNDIGLFGYYINAIGIDYNYVQDPLDAWVTIIIMDVWHWTSLVVLLCYAGLVSIPD
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AFYQAAKIDGASRWAVFRYIQLPKMKRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNSTT
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCCCE
FLSIDLVKTALGQFDLGPAAAMSLIYFLIILLLSWVFYTVMTSHDAEN
EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]