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The map label for this gene is yurM [H]

Identifier: 190894665

GI number: 190894665

Start: 353740

End: 354651

Strand: Reverse

Name: yurM [H]

Synonym: RHECIAT_PC0000328

Alternate gene names: 190894665

Gene position: 354651-353740 (Counterclockwise)

Preceding gene: 190894666

Following gene: 190894664

Centisome position: 32.49

GC content: 57.46

Gene sequence:

>912_bases
ATGAGCGCCTCCAACGAAACGACAGCGAGCCGAAAAATCTCGGGCGTTACCAATGTCGCAAGCGGTCTCTCCTCCGATGA
GGTCAGCCGTCTGATGCGCCGGCGCGGCGAGGAATCGCGCTGGTGGTGGCTGGTTCCGACGATCTATATCATCGTGCTGC
TGTTGCCGATCTACTGGCTCGTCAACATGAGCTTCAAGACCAATGCGGAAATCGTCAATTCTCTGACGCTTTATCCGCAT
AACCCGACGATCGCCAATTACGTGACGATCTTTACGGAGAAAGCGTGGTATTCCGGCTATCTCAATTCGATCACTTATGT
CGTCATGAACATGGTGATCTCAGTGGCGGTTGCGTTGCCGGCGGCCTATGCCTTCTCCCGTTATCGGTTCCTCGGCGACA
AGCATCTCTTCTTCTGGCTGCTGACGAACCGGATGGCGCCGCCTGCCGTCTTTGCCCTGCCGTTCTTCCAGCTCTATTCG
GCGTTTGGACTGATCGATACGCACATCGCCGTGGCATTGGCCCATTGCCTCTTCAACGTGCCGCTGGCGGTCTGGATTCT
TGAAGGCTTCATGTCGGGCGTGCCGAAGGAAATCGACGAAACGGCTTATATCGACGGCTACTCGTTCCCACGATTCTTCC
TGAAGATCTTCACGCCTCTGATCGCGAGCGGCATCGGTGTCGCCTGCTTCTTCTGCTTCATGTTCTCCTGGGTCGAGCTG
CTGATCGCAAGAACGTTGACGACGACCGACGCGAAGCCGATCGCTGCCACCATGACCCGTACCGTCTCGGCATCCGGCAT
GGATTGGGGTCTGCTCGCCGCTGCGGGTGTTGTGACCTTGATCCCAGGGGCGCTGGTGATCTGGTTCGTGCGCAATTACA
TCGCCAAGGGCTTCGCCCTGGGGAGGGTTTGA

Upstream 100 bases:

>100_bases
GGTCCGGCCGCTGCCATGTCGCTGATCTATTTCCTCATCATCCTGCTGCTTTCGTGGGTGTTCTACACCGTCATGACAAG
CCACGACGCGGAGAATTGAA

Downstream 100 bases:

>100_bases
TGAGCTTTTCGCTTCCCGATTTTTCATGGATGGCATGGACCTGGCCGACGGCCGCTTTCTTCATCGTCATCATATTGCTG
CTGATCGGCATGGGGGTCTG

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSASNETTASRKISGVTNVASGLSSDEVSRLMRRRGEESRWWWLVPTIYIIVLLLPIYWLVNMSFKTNAEIVNSLTLYPH
NPTIANYVTIFTEKAWYSGYLNSITYVVMNMVISVAVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYS
AFGLIDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPRFFLKIFTPLIASGIGVACFFCFMFSWVEL
LIARTLTTTDAKPIAATMTRTVSASGMDWGLLAAAGVVTLIPGALVIWFVRNYIAKGFALGRV

Sequences:

>Translated_303_residues
MSASNETTASRKISGVTNVASGLSSDEVSRLMRRRGEESRWWWLVPTIYIIVLLLPIYWLVNMSFKTNAEIVNSLTLYPH
NPTIANYVTIFTEKAWYSGYLNSITYVVMNMVISVAVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYS
AFGLIDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPRFFLKIFTPLIASGIGVACFFCFMFSWVEL
LIARTLTTTDAKPIAATMTRTVSASGMDWGLLAAAGVVTLIPGALVIWFVRNYIAKGFALGRV
>Mature_302_residues
SASNETTASRKISGVTNVASGLSSDEVSRLMRRRGEESRWWWLVPTIYIIVLLLPIYWLVNMSFKTNAEIVNSLTLYPHN
PTIANYVTIFTEKAWYSGYLNSITYVVMNMVISVAVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYSA
FGLIDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPRFFLKIFTPLIASGIGVACFFCFMFSWVELL
IARTLTTTDAKPIAATMTRTVSASGMDWGLLAAAGVVTLIPGALVIWFVRNYIAKGFALGRV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=260, Percent_Identity=27.6923076923077, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790464, Length=209, Percent_Identity=24.8803827751196, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33832; Mature: 33701

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASNETTASRKISGVTNVASGLSSDEVSRLMRRRGEESRWWWLVPTIYIIVLLLPIYWL
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
VNMSFKTNAEIVNSLTLYPHNPTIANYVTIFTEKAWYSGYLNSITYVVMNMVISVAVALP
HCCCCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYSAFGLIDTHIAVALAHCLFNV
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLAVWILEGFMSGVPKEIDETAYIDGYSFPRFFLKIFTPLIASGIGVACFFCFMFSWVEL
HHHHHHHHHHHHCCCHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIARTLTTTDAKPIAATMTRTVSASGMDWGLLAAAGVVTLIPGALVIWFVRNYIAKGFAL
HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRV
CCC
>Mature Secondary Structure 
SASNETTASRKISGVTNVASGLSSDEVSRLMRRRGEESRWWWLVPTIYIIVLLLPIYWL
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]