| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is yhaO [H]
Identifier: 190894581
GI number: 190894581
Start: 244473
End: 245741
Strand: Reverse
Name: yhaO [H]
Synonym: RHECIAT_PC0000243
Alternate gene names: 190894581
Gene position: 245741-244473 (Counterclockwise)
Preceding gene: 190894582
Following gene: 190894580
Centisome position: 22.51
GC content: 65.72
Gene sequence:
>1269_bases ATGGCTTATCGTTTCGTCCACACTGCCGATCTCCATCTCGACTCTCCGCTACGGTCGCTGGCGCTTCGCAACGCCGAGCT GGCCGATCTCGTGAGCGACGCCAGTCGGCAGGTGCTGATCGCGATCGTCGACCTTTGCCTCGAGGAACAGGTCGATGCGC TGGTCATCGCCGGCGATCTCTATGACGGCGAGCAGACGTCGATGAAGACGGCGCGCTTCCTGGCAAGCCAGCTGGAACGG CTGCACCGGGCGGGGATTTGCGTCTTCAAGATCCGCGGCAATCACGATGCGATGTCGAAGATCGCCAGAGAGCTGGTGAT GCCCGACACGGTGAAGGTCTTCGGCGGCCATGCCGAGACCGTGGAGGCGACGAAAGGCAGCCTGTCGGTTGCGATGCACG GTCTGAGCTTTGCCAAGCCGCAGGCGCCGGACCCGCTTCTGCCGAAGTTCAAGCCGCCGGTCGCAGGTGCCGTCAATATC GGCATCATGCATACGAGCCTTGCCGGATCCGCCGGCCATGATGTCTATGCGCCCTGCAACGTGCTCGACCTTCACGCCTC GGGATTCGACTACTGGGCGCTCGGGCATCTTCATCAGCGCAGCCAGTATCCCGGCACGGCGACGGTCATCATGCCCGGCA TGCCGCAGGGCCGCGACATTAACGAGGCGGGCGTCAAGACGGTGTCGCTGGTGACCGTGGCGGACAACAGGACGGTGACG GTCGAGGAGCGGCGCACCAGCATCGCGCAGTTCGAGCGCGTCGATGTCGACCTCACGGGTGTCGACGATTGGCGTGATGC GGCCATGGCGATCGAAGCGGCACTCATGGGGCAGCGCGACCATACCGCCTCGCCGCATCTCGTCGCGCGCCTCAGGCTTT CCGGTCGCACGCCGCTCTCCTGGCAGCTTCGCCGCGATATCGACCTCATGCAGGCGGAAGCCGAGCAGCGCGGTGACCGC ATCGGCCGGACCTGGATCGAGAAGCTGGAGCTCGCCTTAGAAGCGCCGGTGCCCCTCGCCGACGAAGCAGTTGCCGATCC CGTCATCGAGCTCGGCGCGCTGATGCGGGACGATGTCATCGCCCGCAGCGGGTTTCGCGACGATGTCAGGGAGATGGTCC GCGACCTGCTCGCCGACCTGCCGCCCGAGAGCCGGGCATTTGCCGGGCATGACGAGGCGGGTTTCGAACGCTTCATCGAC AGCCTTCTCGCCGATGGCGCCGAGGATATCGCCGCCCGGATGAAGGCCGCGGAGCGGGGAGACAGCTGA
Upstream 100 bases:
>100_bases GCTCCATATTCTCTTCCTCCCGGTCAGGTGACAGCGATCGCGCGTTCATCGGTCCGAGGGCACCCGCTCATCATTCTGTC GCAACGCGATTTCTGCATTC
Downstream 100 bases:
>100_bases TGCGCCTGCGCCGTCTCGACCTCGTCCGTTATGGCAAGTTCACCGACCACTCGATCGATTTCGGTGCGGCCCGCACGGGT TCGCCGGATCTGCACATCGT
Product: putative serine/threonine-specific phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MAYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDLYDGEQTSMKTARFLASQLER LHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAETVEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNI GIMHTSLAGSAGHDVYAPCNVLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLSWQLRRDIDLMQAEAEQRGDR IGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVIARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFID SLLADGAEDIAARMKAAERGDS
Sequences:
>Translated_422_residues MAYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDLYDGEQTSMKTARFLASQLER LHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAETVEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNI GIMHTSLAGSAGHDVYAPCNVLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLSWQLRRDIDLMQAEAEQRGDR IGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVIARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFID SLLADGAEDIAARMKAAERGDS >Mature_421_residues AYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDLYDGEQTSMKTARFLASQLERL HRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAETVEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNIG IMHTSLAGSAGHDVYAPCNVLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVTV EERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLSWQLRRDIDLMQAEAEQRGDRI GRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVIARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFIDS LLADGAEDIAARMKAAERGDS
Specific function: Unknown
COG id: COG0420
COG function: function code L; DNA repair exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR014576 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 46029; Mature: 45898
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDL CCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC YDGEQTSMKTARFLASQLERLHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAET CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCHH VEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNIGIMHTSLAGSAGHDVYAPCN HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC VLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT EEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHCCEEEEEEEEECCCEEE VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLS EHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC WQLRRDIDLMQAEAEQRGDRIGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFIDSLLADGAEDIAARMKAAERG HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC DS CC >Mature Secondary Structure AYRFVHTADLHLDSPLRSLALRNAELADLVSDASRQVLIAIVDLCLEEQVDALVIAGDL CEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC YDGEQTSMKTARFLASQLERLHRAGICVFKIRGNHDAMSKIARELVMPDTVKVFGGHAET CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCHH VEATKGSLSVAMHGLSFAKPQAPDPLLPKFKPPVAGAVNIGIMHTSLAGSAGHDVYAPCN HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC VLDLHASGFDYWALGHLHQRSQYPGTATVIMPGMPQGRDINEAGVKTVSLVTVADNRTVT EEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHCCEEEEEEEEECCCEEE VEERRTSIAQFERVDVDLTGVDDWRDAAMAIEAALMGQRDHTASPHLVARLRLSGRTPLS EHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC WQLRRDIDLMQAEAEQRGDRIGRTWIEKLELALEAPVPLADEAVADPVIELGALMRDDVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ARSGFRDDVREMVRDLLADLPPESRAFAGHDEAGFERFIDSLLADGAEDIAARMKAAERG HHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC DS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]