| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894582
Identifier: 190894582
GI number: 190894582
Start: 245894
End: 247933
Strand: Reverse
Name: 190894582
Synonym: RHECIAT_PC0000244
Alternate gene names: NA
Gene position: 247933-245894 (Counterclockwise)
Preceding gene: 190894587
Following gene: 190894581
Centisome position: 22.71
GC content: 60.0
Gene sequence:
>2040_bases ATGGAAACCGTGCAATATCTAAGCCCGATGGGATGGAAGGCGATCGGAATCGCCATTACGCTCATCGTGCTGGCAACCCT GTTCCGGTTGAGCGGCGTGATCCGCTATATCCCCAACGACAGGCTCGGCATTCTCGAAAAGCTGTGGAGTTTTCGCGGCT CCGTCGACAATGGCTTCATTGCGCTCTACGGCGAGGCCGGCTTCCAGCCGGACGTCGTGCGCGGCGGCCTGCATTTCTTC ATGCCGTTCCAATATGCGATGCATCGCGCCAATCTCGTGACCATTCCGCAGGGCCAGATCGGCTATGTCTTCGCCCGCGA CGGCGAGCCGTTGCCGCCGACCCAGACGCTTGCTTCGAACATCGACGCCGATGACTTTCAAGATGTGCGCGGCTTTCTGA CAAAGGGCGGCCAGAAGGGTCCGCAGCGCAAGATCCTGCGCGAGGGCACCTATGCCATCAATCTAGCGCAGTTCATCGTG CTGACGGCGCAATCGACCTATGCCGTCAACCTGAACGCGTCGGAACAAAAACTGTTCGCCGACATGTCGACATTGATCAC CGAGCGGAATGGCTTCGCGCCCGTTGTCATTCATGACGCCGAGGACCTGATCGGCATCGTCACCATCCATGACGGCCCGG CGCTGCCCGATGGCGAGATCATCGCCCCGACGGTTGCCAACAATCCGAAGGACCCGAACTTCCACAATAATTTCCAGGAT CCGGAGAAGTTTCTCAATGCCGGCGGTTATCGCGGCCGGCAATTGCAGGTGCTTGCCGACGGCAGTTACTTCCTCAACCG TATCTTTGCGACCGTCGAACTCGTCGAGAAGACGATCATCGACGTCGGCACGGTGGGTGTCGTCGTTTCCTATACCGGCC GGCGAAGCGCGGATATTTCGGGCCAGTCCTATCGCCACGGTGAACTGGTCGAAACGGGCGCACGCGGTGTCTGGTCGACG CCGTTGCTGCCGGGCAAATATGCGTTCAACACCTATGCCGGCAATATCATCATCGTGCCGACCACCAACTTCGTGCTCAA ATGGACGAAGGAACAGTTCGGCGAGCACAGGCTCGACGAGAATCTTTCCGAAGTGTCGCTGATCACCAAGGATGCGTTCG AGCCGGTGCTGCCGCTCTCGGTGGTCGTCCATATCGATTATATGAAGGCGCCCCTCGTCGTGCAGCGTTTCGGGGATATC AAACGGCTGGTCGAACAAACGCTCGATCCGATGGTCTCGGCTTATTTCAAGAATATCGCTCAAACCAAGACGCTGATCGA ACTGTTGCAGGAACGCAGCGAAATCCAGCGCAAATCCGGTGATGAAATGCGCGAGAAGTTTGGCTCCTACAGCCTCGAGC TGCAGGAAGTGCTGATCGGTACGCCGCGGGCCAATAATGGTCAGAACAGCATAGAGCAGATCCTCATCCAGCTGCGCGAG CGTCAGATCGCTGTTGAAAAGGTCGAGACTTACAAATTGCAGGAGGCGGCGGCGATCCAGGAGCGCACCTTGCGCGAGAA GGAGGCGCTTGCTGAGCAGCAGGCCAAGATCACGACATCGGCGCTCACCATCGAGATCAGCGAAAACGAGGGCAAGGCGC AGCTCGCCCGCACCCGCCAGCAGGCGGAAACCATTCAGGTGACCGCCAAGGCAGAGGCTGAGAAGGTGCGCCTTGCCGGC CTCGGCGAGGCCGACCGGATCAAGGCCGTCGCGCTTGCTGATGCCGAACGCATCAAGGCGACGGGTCTGGCAGATGCCCA GAAGGTGCGCGCCATCGGCCTGGCGGAAGCCGAGGCGACGGAGAAGAAGGTCGCGGCCTTCGGCGGACCGGACTATCAGC TCAACTCACAGGTCCTGATGCGCTTCGCCGAAGCAATCGAAAACGGCAGGCTGCCGCTCGTGCCGCAGATCCAGGTCGGC GGCGGCGAAAAGGGCGCCACCAATGGTCTTGTGGAAATGATGCTGTCGATGCTGGTCGCCGATCGGCTGGGACCGCAGGG TGCACCGGCTGCGGTGCCGGCCCCGATTGAGCAACATTGA
Upstream 100 bases:
>100_bases TGCGTCGAGCGCATAGGCGCGCAATCTCCCCGTCTTATCAACCAACACCAACCGGGCGGCCATCGGGTGGACGAACCCGT GCGCCCATGCGAGAAAAAAG
Downstream 100 bases:
>100_bases TTGTGGATGGGCCGGTTTGCCGGCCCATTTCGCTCGCGCGCCCTGGACGCGTGCTCCATATTCTCTTCCTCCCGGTCAGG TGACAGCGATCGCGCGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues METVQYLSPMGWKAIGIAITLIVLATLFRLSGVIRYIPNDRLGILEKLWSFRGSVDNGFIALYGEAGFQPDVVRGGLHFF MPFQYAMHRANLVTIPQGQIGYVFARDGEPLPPTQTLASNIDADDFQDVRGFLTKGGQKGPQRKILREGTYAINLAQFIV LTAQSTYAVNLNASEQKLFADMSTLITERNGFAPVVIHDAEDLIGIVTIHDGPALPDGEIIAPTVANNPKDPNFHNNFQD PEKFLNAGGYRGRQLQVLADGSYFLNRIFATVELVEKTIIDVGTVGVVVSYTGRRSADISGQSYRHGELVETGARGVWST PLLPGKYAFNTYAGNIIIVPTTNFVLKWTKEQFGEHRLDENLSEVSLITKDAFEPVLPLSVVVHIDYMKAPLVVQRFGDI KRLVEQTLDPMVSAYFKNIAQTKTLIELLQERSEIQRKSGDEMREKFGSYSLELQEVLIGTPRANNGQNSIEQILIQLRE RQIAVEKVETYKLQEAAAIQERTLREKEALAEQQAKITTSALTIEISENEGKAQLARTRQQAETIQVTAKAEAEKVRLAG LGEADRIKAVALADAERIKATGLADAQKVRAIGLAEAEATEKKVAAFGGPDYQLNSQVLMRFAEAIENGRLPLVPQIQVG GGEKGATNGLVEMMLSMLVADRLGPQGAPAAVPAPIEQH
Sequences:
>Translated_679_residues METVQYLSPMGWKAIGIAITLIVLATLFRLSGVIRYIPNDRLGILEKLWSFRGSVDNGFIALYGEAGFQPDVVRGGLHFF MPFQYAMHRANLVTIPQGQIGYVFARDGEPLPPTQTLASNIDADDFQDVRGFLTKGGQKGPQRKILREGTYAINLAQFIV LTAQSTYAVNLNASEQKLFADMSTLITERNGFAPVVIHDAEDLIGIVTIHDGPALPDGEIIAPTVANNPKDPNFHNNFQD PEKFLNAGGYRGRQLQVLADGSYFLNRIFATVELVEKTIIDVGTVGVVVSYTGRRSADISGQSYRHGELVETGARGVWST PLLPGKYAFNTYAGNIIIVPTTNFVLKWTKEQFGEHRLDENLSEVSLITKDAFEPVLPLSVVVHIDYMKAPLVVQRFGDI KRLVEQTLDPMVSAYFKNIAQTKTLIELLQERSEIQRKSGDEMREKFGSYSLELQEVLIGTPRANNGQNSIEQILIQLRE RQIAVEKVETYKLQEAAAIQERTLREKEALAEQQAKITTSALTIEISENEGKAQLARTRQQAETIQVTAKAEAEKVRLAG LGEADRIKAVALADAERIKATGLADAQKVRAIGLAEAEATEKKVAAFGGPDYQLNSQVLMRFAEAIENGRLPLVPQIQVG GGEKGATNGLVEMMLSMLVADRLGPQGAPAAVPAPIEQH >Mature_679_residues METVQYLSPMGWKAIGIAITLIVLATLFRLSGVIRYIPNDRLGILEKLWSFRGSVDNGFIALYGEAGFQPDVVRGGLHFF MPFQYAMHRANLVTIPQGQIGYVFARDGEPLPPTQTLASNIDADDFQDVRGFLTKGGQKGPQRKILREGTYAINLAQFIV LTAQSTYAVNLNASEQKLFADMSTLITERNGFAPVVIHDAEDLIGIVTIHDGPALPDGEIIAPTVANNPKDPNFHNNFQD PEKFLNAGGYRGRQLQVLADGSYFLNRIFATVELVEKTIIDVGTVGVVVSYTGRRSADISGQSYRHGELVETGARGVWST PLLPGKYAFNTYAGNIIIVPTTNFVLKWTKEQFGEHRLDENLSEVSLITKDAFEPVLPLSVVVHIDYMKAPLVVQRFGDI KRLVEQTLDPMVSAYFKNIAQTKTLIELLQERSEIQRKSGDEMREKFGSYSLELQEVLIGTPRANNGQNSIEQILIQLRE RQIAVEKVETYKLQEAAAIQERTLREKEALAEQQAKITTSALTIEISENEGKAQLARTRQQAETIQVTAKAEAEKVRLAG LGEADRIKAVALADAERIKATGLADAQKVRAIGLAEAEATEKKVAAFGGPDYQLNSQVLMRFAEAIENGRLPLVPQIQVG GGEKGATNGLVEMMLSMLVADRLGPQGAPAAVPAPIEQH
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74580; Mature: 74580
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVQYLSPMGWKAIGIAITLIVLATLFRLSGVIRYIPNDRLGILEKLWSFRGSVDNGFI CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCEE ALYGEAGFQPDVVRGGLHFFMPFQYAMHRANLVTIPQGQIGYVFARDGEPLPPTQTLASN EEEECCCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCHHHHHHC IDADDFQDVRGFLTKGGQKGPQRKILREGTYAINLAQFIVLTAQSTYAVNLNASEQKLFA CCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHEEHHHEEEEEECCEEEEECCCHHHHHHH DMSTLITERNGFAPVVIHDAEDLIGIVTIHDGPALPDGEIIAPTVANNPKDPNFHNNFQD HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCC PEKFLNAGGYRGRQLQVLADGSYFLNRIFATVELVEKTIIDVGTVGVVVSYTGRRSADIS HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC GQSYRHGELVETGARGVWSTPLLPGKYAFNTYAGNIIIVPTTNFVLKWTKEQFGEHRLDE CCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECHHHHHHHHHHC NLSEVSLITKDAFEPVLPLSVVVHIDYMKAPLVVQRFGDIKRLVEQTLDPMVSAYFKNIA CHHHHHHHHHHHCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKTLIELLQERSEIQRKSGDEMREKFGSYSLELQEVLIGTPRANNGQNSIEQILIQLRE HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHEECCCCCCCHHHHHHHHHHHHH RQIAVEKVETYKLQEAAAIQERTLREKEALAEQQAKITTSALTIEISENEGKAQLARTRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHH QAETIQVTAKAEAEKVRLAGLGEADRIKAVALADAERIKATGLADAQKVRAIGLAEAEAT HHHEEEEEECCCCCEEEEECCCCHHHEEEEEECCHHHHHHCCCCHHHHHHHHCCHHHHHH EKKVAAFGGPDYQLNSQVLMRFAEAIENGRLPLVPQIQVGGGEKGATNGLVEMMLSMLVA HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH DRLGPQGAPAAVPAPIEQH HHCCCCCCCCCCCCCCCCC >Mature Secondary Structure METVQYLSPMGWKAIGIAITLIVLATLFRLSGVIRYIPNDRLGILEKLWSFRGSVDNGFI CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCEE ALYGEAGFQPDVVRGGLHFFMPFQYAMHRANLVTIPQGQIGYVFARDGEPLPPTQTLASN EEEECCCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCHHHHHHC IDADDFQDVRGFLTKGGQKGPQRKILREGTYAINLAQFIVLTAQSTYAVNLNASEQKLFA CCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHEEHHHEEEEEECCEEEEECCCHHHHHHH DMSTLITERNGFAPVVIHDAEDLIGIVTIHDGPALPDGEIIAPTVANNPKDPNFHNNFQD HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCC PEKFLNAGGYRGRQLQVLADGSYFLNRIFATVELVEKTIIDVGTVGVVVSYTGRRSADIS HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC GQSYRHGELVETGARGVWSTPLLPGKYAFNTYAGNIIIVPTTNFVLKWTKEQFGEHRLDE CCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECHHHHHHHHHHC NLSEVSLITKDAFEPVLPLSVVVHIDYMKAPLVVQRFGDIKRLVEQTLDPMVSAYFKNIA CHHHHHHHHHHHCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTKTLIELLQERSEIQRKSGDEMREKFGSYSLELQEVLIGTPRANNGQNSIEQILIQLRE HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEHHHEECCCCCCCHHHHHHHHHHHHH RQIAVEKVETYKLQEAAAIQERTLREKEALAEQQAKITTSALTIEISENEGKAQLARTRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHH QAETIQVTAKAEAEKVRLAGLGEADRIKAVALADAERIKATGLADAQKVRAIGLAEAEAT HHHEEEEEECCCCCEEEEECCCCHHHEEEEEECCHHHHHHCCCCHHHHHHHHCCHHHHHH EKKVAAFGGPDYQLNSQVLMRFAEAIENGRLPLVPQIQVGGGEKGATNGLVEMMLSMLVA HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH DRLGPQGAPAAVPAPIEQH HHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA