| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894502
Identifier: 190894502
GI number: 190894502
Start: 161106
End: 162266
Strand: Reverse
Name: 190894502
Synonym: RHECIAT_PC0000164
Alternate gene names: NA
Gene position: 162266-161106 (Counterclockwise)
Preceding gene: 190894505
Following gene: 190894500
Centisome position: 14.87
GC content: 63.82
Gene sequence:
>1161_bases ATGTCTCATTCCCTTCTCGATGCCGCTGCTTCGGCTGGTCTTTTTGTCGGCCGCGTCTGGAGCCCCGAGGCCGCCGGCCC GAGCATCGTGACGCTTCGCGAGGGGATGCTGGTCGATATTACCTCGCGCGATGCGCCGACGCTGAGCGCCCTGCTCGAAA AACAGGATGCCGCCGGCTTCGTCCGCGCGGCAACGGGCACGGCGGTCGGGTCCTTGGAGGAGGTCGCCGACAATAGTACC GGGACGCCGGACACCGCGCGGCCCTATCTGCTGGCGCCCGCCGACCTGCAGGCGATCAAGGCCTGCGGCGTCACCTTCGC CCAATCAATGATCGAGCGTGTCATCGAGGAGAAGGCGGCCGGTAATCCCGATCGCGCCGCCTCGATCCGCGAACGCGTCA GCGCGCTGATCGGGGGCAGCCTCACCAATCTCAAGGCCGGTTCGCCCGAGGCCGCCAAGGTCAAGCAGGCGCTGATTGAC GAGGGCATGTGGTCGCAATATCTCGAAGTCGGCATCGGACCTGACGCCGAGGTCTTCACCAAGGCGCCGGTGCTCTCCTC CGTCGGCTGGGGTGCGGATGTCGGTCTGCATCCGATTTCGACCTGGAACAATCCCGAGCCGGAAATCGTGCTTGCAGTCA ACAGCCGCGGTGAAATCAAGGGTGTGACGCTCGGCAACGACGTCAACCTGCGTGACGTCGAGGGCCGCTCGGCGCTGCTG CTCGGCAAGGCCAAGGACAACAACGCCTCCTGCGCAATCGGCCCCTTCATCCGCCTGTTCGATGCAAGTTACGGGCTGGA TGACGTGCGCAAGGCCGAACTCGATCTCAAGGTCACCGGCCGCGATGGCTTCGTGCTAAACGGCAAGAGCTCGATGTCGC AGATCAGCCGCGATCCGACCGATCTCGTCAAACAGACACTCGGGGCCCATCACCAGTATCCCGATGGTTTCATGCTCTTT CTCGGCACATTGTTTGCCCCGACTCAGGATCGTGACGCTCCGAAGCAGGGTTTCACCCACAAGATCGGCGATGTCGTCGA GATTTCCTCGGCAGGTCTCGGCGCTCTCGTCAACACCGTGCGCCTCTCCACCGAATGCCCGCCCTGGACCTTCGGCATTG CGGCGCTGATGGGCAATCTGGCGAAGCGCGGGTTGCTGTAA
Upstream 100 bases:
>100_bases CGTGAATGTGATCGATTTCAGCCGCCGCCGGCTTGGAGGGTGGCGCCATCTCGGAAATTTTCAAAGCGCCCGCCCCGCTT GCCTGTGACGGAGGATCACC
Downstream 100 bases:
>100_bases CTACTGGTTTCGCCGCCTGCCCTGCAGCAGGTCGAGAACGGAATTGGCCGCCTCCAGAACGTTGGTTCCCGGGCCGAACA CGGCGGCGACGCCGTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSHSLLDAAASAGLFVGRVWSPEAAGPSIVTLREGMLVDITSRDAPTLSALLEKQDAAGFVRAATGTAVGSLEEVADNST GTPDTARPYLLAPADLQAIKACGVTFAQSMIERVIEEKAAGNPDRAASIRERVSALIGGSLTNLKAGSPEAAKVKQALID EGMWSQYLEVGIGPDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGVTLGNDVNLRDVEGRSALL LGKAKDNNASCAIGPFIRLFDASYGLDDVRKAELDLKVTGRDGFVLNGKSSMSQISRDPTDLVKQTLGAHHQYPDGFMLF LGTLFAPTQDRDAPKQGFTHKIGDVVEISSAGLGALVNTVRLSTECPPWTFGIAALMGNLAKRGLL
Sequences:
>Translated_386_residues MSHSLLDAAASAGLFVGRVWSPEAAGPSIVTLREGMLVDITSRDAPTLSALLEKQDAAGFVRAATGTAVGSLEEVADNST GTPDTARPYLLAPADLQAIKACGVTFAQSMIERVIEEKAAGNPDRAASIRERVSALIGGSLTNLKAGSPEAAKVKQALID EGMWSQYLEVGIGPDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGVTLGNDVNLRDVEGRSALL LGKAKDNNASCAIGPFIRLFDASYGLDDVRKAELDLKVTGRDGFVLNGKSSMSQISRDPTDLVKQTLGAHHQYPDGFMLF LGTLFAPTQDRDAPKQGFTHKIGDVVEISSAGLGALVNTVRLSTECPPWTFGIAALMGNLAKRGLL >Mature_385_residues SHSLLDAAASAGLFVGRVWSPEAAGPSIVTLREGMLVDITSRDAPTLSALLEKQDAAGFVRAATGTAVGSLEEVADNSTG TPDTARPYLLAPADLQAIKACGVTFAQSMIERVIEEKAAGNPDRAASIRERVSALIGGSLTNLKAGSPEAAKVKQALIDE GMWSQYLEVGIGPDAEVFTKAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGVTLGNDVNLRDVEGRSALLL GKAKDNNASCAIGPFIRLFDASYGLDDVRKAELDLKVTGRDGFVLNGKSSMSQISRDPTDLVKQTLGAHHQYPDGFMLFL GTLFAPTQDRDAPKQGFTHKIGDVVEISSAGLGALVNTVRLSTECPPWTFGIAALMGNLAKRGLL
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40574; Mature: 40443
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSLLDAAASAGLFVGRVWSPEAAGPSIVTLREGMLVDITSRDAPTLSALLEKQDAAGF CCCHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCE VRAATGTAVGSLEEVADNSTGTPDTARPYLLAPADLQAIKACGVTFAQSMIERVIEEKAA EEECCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPDRAASIRERVSALIGGSLTNLKAGSPEAAKVKQALIDEGMWSQYLEVGIGPDAEVFT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHH KAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGVTLGNDVNLRDVEGRSALL CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEECCCCCEEE LGKAKDNNASCAIGPFIRLFDASYGLDDVRKAELDLKVTGRDGFVLNGKSSMSQISRDPT EEECCCCCCCEEHHHHHHHHHCCCCCCHHHHCEEEEEEECCCCEEECCCHHHHHHCCCHH DLVKQTLGAHHQYPDGFMLFLGTLFAPTQDRDAPKQGFTHKIGDVVEISSAGLGALVNTV HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCHHHHHHHH RLSTECPPWTFGIAALMGNLAKRGLL EECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHSLLDAAASAGLFVGRVWSPEAAGPSIVTLREGMLVDITSRDAPTLSALLEKQDAAGF CCHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCE VRAATGTAVGSLEEVADNSTGTPDTARPYLLAPADLQAIKACGVTFAQSMIERVIEEKAA EEECCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPDRAASIRERVSALIGGSLTNLKAGSPEAAKVKQALIDEGMWSQYLEVGIGPDAEVFT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHH KAPVLSSVGWGADVGLHPISTWNNPEPEIVLAVNSRGEIKGVTLGNDVNLRDVEGRSALL CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEECCCCCEEE LGKAKDNNASCAIGPFIRLFDASYGLDDVRKAELDLKVTGRDGFVLNGKSSMSQISRDPT EEECCCCCCCEEHHHHHHHHHCCCCCCHHHHCEEEEEEECCCCEEECCCHHHHHHCCCHH DLVKQTLGAHHQYPDGFMLFLGTLFAPTQDRDAPKQGFTHKIGDVVEISSAGLGALVNTV HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCHHHHHHHH RLSTECPPWTFGIAALMGNLAKRGLL EECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA