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The map label for this gene is soxA [H]

Identifier: 190894500

GI number: 190894500

Start: 157512

End: 158870

Strand: Reverse

Name: soxA [H]

Synonym: RHECIAT_PC0000162

Alternate gene names: 190894500

Gene position: 158870-157512 (Counterclockwise)

Preceding gene: 190894502

Following gene: 190894495

Centisome position: 14.55

GC content: 61.81

Gene sequence:

>1359_bases
ATGAAGACAATGCAGATCTATGCCTTCGACATGAATTGCGTCGGGCACATCAACCACGGTCTGTGGACGCATCCGCGCGA
CCAATCGGTGCGCTATACCGATCTCGACTACTGGACGGAATTCGCCAGGACCGCGGAGCGCGGTAAGCTGGATGGAATCT
TCTTAGCCGATATCGTCGGCGTCTATGACGTCTATAAGGATAGCCCCGCGCCGGTGATCGAGACGGCTGCGCAAATCCCC
GTCAACGACCCGTTGATCCCGATTTCGGCGATGGCGCATGTGACGAAACATCTGGGTTTCGGTGTCACCGTCAACACCAC
CTACGAGCCGCCCTTTTTGCTGGCACGGCGCATGTCGACGCTCGACCACCTGACCAAGGGGCGGATCGGCTGGAATATCG
TCACCGGTTATCTCGACAGCGCCGCCCGCAGCATGGGTTTCGACAAGCTGCCGGAGCATAATGCGCGTTACGACGCAGCC
GAGGAATATCTTGAGATCCTCTACAAGCTCTGGGAGGGCAGCTGGGACGACGATGCAGTTCGCCGGGACCGGACGGGCGG
AATTTATGCCGATCCGTCGAAGGTGCGCGCCGTCCGTCATGACGGCAGATATTACCGGATGGAGGGCATCCATCTTGCCG
AGCCTTCACTGCAGCGCACGCCCCTGCTCTTCCAGGCCGGTGCTTCGGCCCGCGGGCAGGATTTTGCCGCCCGCCACGCC
GAATGTGTCTTCGTCGCCAGCCCGAACCCCGGGGCGGCCCGGCCGACCGTCGATGCGCTGCGGGCGAAGGCGCAGGCATT
CGGCCGCGGCGGAGCCGCATTGAAGATCCTGAACCTGATTACTGTTGTCGTCGGGCGGACGGAGAGGCAAGCACAAGACA
GGCTGGAGGATTACCGCCGCCATGCGAGCATCGAGGCCTCGCTTGCGCATTACTCCGCCTCCATCGGCATCGATCTGGCG
AAATACCGGTTGGATGATGTCATCGAGCAGAACTCGACCAACGCCAATCAATCGGCGCTTGCCGCAATCACCAAACAGGC
GGCAAAGCCTGTGACGAAGCGAGAGATTATCGACCAGATGGTGCTCGGCAGCCGGATGAAGCCGATGGTGGGATCGCCGG
AGCAGATCGCCGACCGTCTGCAGGAATGGATCGAGCACGGCGATATCGACGGTTTCAATTTGGCGCGCACGGTGGCGCCG
GAAAGTCTGATCGATTTCATCGATCTCGTCGTGCCGGTGCTGCAGGAGCGCGGTTGCTTCAAGGCGGACTACAGCGAAGG
GCCGCTGCGCCAGAAGCTGTTCGGCGGCGAGAACGGTCGGTTGCCCGACGCGCATCCCGCCGCCAGTTTCCGGCGCTGA

Upstream 100 bases:

>100_bases
TCATGCATTTCCTCCGCCTTTTCCATCCGCACCCTACCATTTCACAGGATCGCCGTGCGATACAAATCCTTGATTTTTAT
TCCCGGCTCAGGACACTTCC

Downstream 100 bases:

>100_bases
CCTATCTGCGATCCAGCCTGGCGACCAGCCGGTCGCCGAGCCATTGGATGCCGCAGACGAGGACGATGAGGACGGCGACG
ACCGCGATCATCACGTTGGT

Product: putative monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MKTMQIYAFDMNCVGHINHGLWTHPRDQSVRYTDLDYWTEFARTAERGKLDGIFLADIVGVYDVYKDSPAPVIETAAQIP
VNDPLIPISAMAHVTKHLGFGVTVNTTYEPPFLLARRMSTLDHLTKGRIGWNIVTGYLDSAARSMGFDKLPEHNARYDAA
EEYLEILYKLWEGSWDDDAVRRDRTGGIYADPSKVRAVRHDGRYYRMEGIHLAEPSLQRTPLLFQAGASARGQDFAARHA
ECVFVASPNPGAARPTVDALRAKAQAFGRGGAALKILNLITVVVGRTERQAQDRLEDYRRHASIEASLAHYSASIGIDLA
KYRLDDVIEQNSTNANQSALAAITKQAAKPVTKREIIDQMVLGSRMKPMVGSPEQIADRLQEWIEHGDIDGFNLARTVAP
ESLIDFIDLVVPVLQERGCFKADYSEGPLRQKLFGGENGRLPDAHPAASFRR

Sequences:

>Translated_452_residues
MKTMQIYAFDMNCVGHINHGLWTHPRDQSVRYTDLDYWTEFARTAERGKLDGIFLADIVGVYDVYKDSPAPVIETAAQIP
VNDPLIPISAMAHVTKHLGFGVTVNTTYEPPFLLARRMSTLDHLTKGRIGWNIVTGYLDSAARSMGFDKLPEHNARYDAA
EEYLEILYKLWEGSWDDDAVRRDRTGGIYADPSKVRAVRHDGRYYRMEGIHLAEPSLQRTPLLFQAGASARGQDFAARHA
ECVFVASPNPGAARPTVDALRAKAQAFGRGGAALKILNLITVVVGRTERQAQDRLEDYRRHASIEASLAHYSASIGIDLA
KYRLDDVIEQNSTNANQSALAAITKQAAKPVTKREIIDQMVLGSRMKPMVGSPEQIADRLQEWIEHGDIDGFNLARTVAP
ESLIDFIDLVVPVLQERGCFKADYSEGPLRQKLFGGENGRLPDAHPAASFRR
>Mature_452_residues
MKTMQIYAFDMNCVGHINHGLWTHPRDQSVRYTDLDYWTEFARTAERGKLDGIFLADIVGVYDVYKDSPAPVIETAAQIP
VNDPLIPISAMAHVTKHLGFGVTVNTTYEPPFLLARRMSTLDHLTKGRIGWNIVTGYLDSAARSMGFDKLPEHNARYDAA
EEYLEILYKLWEGSWDDDAVRRDRTGGIYADPSKVRAVRHDGRYYRMEGIHLAEPSLQRTPLLFQAGASARGQDFAARHA
ECVFVASPNPGAARPTVDALRAKAQAFGRGGAALKILNLITVVVGRTERQAQDRLEDYRRHASIEASLAHYSASIGIDLA
KYRLDDVIEQNSTNANQSALAAITKQAAKPVTKREIIDQMVLGSRMKPMVGSPEQIADRLQEWIEHGDIDGFNLARTVAP
ESLIDFIDLVVPVLQERGCFKADYSEGPLRQKLFGGENGRLPDAHPAASFRR

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=224, Percent_Identity=26.3392857142857, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787166, Length=345, Percent_Identity=23.768115942029, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 50332; Mature: 50332

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMQIYAFDMNCVGHINHGLWTHPRDQSVRYTDLDYWTEFARTAERGKLDGIFLADIVG
CCCEEEEEEECCHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHH
VYDVYKDSPAPVIETAAQIPVNDPLIPISAMAHVTKHLGFGVTVNTTYEPPFLLARRMST
HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH
LDHLTKGRIGWNIVTGYLDSAARSMGFDKLPEHNARYDAAEEYLEILYKLWEGSWDDDAV
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
RRDRTGGIYADPSKVRAVRHDGRYYRMEGIHLAEPSLQRTPLLFQAGASARGQDFAARHA
HHCCCCCEEECHHHHHHHHCCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCHHHHCCC
ECVFVASPNPGAARPTVDALRAKAQAFGRGGAALKILNLITVVVGRTERQAQDRLEDYRR
CEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HASIEASLAHYSASIGIDLAKYRLDDVIEQNSTNANQSALAAITKQAAKPVTKREIIDQM
HCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
VLGSRMKPMVGSPEQIADRLQEWIEHGDIDGFNLARTVAPESLIDFIDLVVPVLQERGCF
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCC
KADYSEGPLRQKLFGGENGRLPDAHPAASFRR
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTMQIYAFDMNCVGHINHGLWTHPRDQSVRYTDLDYWTEFARTAERGKLDGIFLADIVG
CCCEEEEEEECCHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHH
VYDVYKDSPAPVIETAAQIPVNDPLIPISAMAHVTKHLGFGVTVNTTYEPPFLLARRMST
HHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH
LDHLTKGRIGWNIVTGYLDSAARSMGFDKLPEHNARYDAAEEYLEILYKLWEGSWDDDAV
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
RRDRTGGIYADPSKVRAVRHDGRYYRMEGIHLAEPSLQRTPLLFQAGASARGQDFAARHA
HHCCCCCEEECHHHHHHHHCCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCHHHHCCC
ECVFVASPNPGAARPTVDALRAKAQAFGRGGAALKILNLITVVVGRTERQAQDRLEDYRR
CEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HASIEASLAHYSASIGIDLAKYRLDDVIEQNSTNANQSALAAITKQAAKPVTKREIIDQM
HCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
VLGSRMKPMVGSPEQIADRLQEWIEHGDIDGFNLARTVAPESLIDFIDLVVPVLQERGCF
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCC
KADYSEGPLRQKLFGGENGRLPDAHPAASFRR
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]