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The map label for this gene is recGc [H]

Identifier: 190894447

GI number: 190894447

Start: 108047

End: 109645

Strand: Reverse

Name: recGc [H]

Synonym: RHECIAT_PC0000109

Alternate gene names: 190894447

Gene position: 109645-108047 (Counterclockwise)

Preceding gene: 190894448

Following gene: 190894446

Centisome position: 10.05

GC content: 55.72

Gene sequence:

>1599_bases
ATGCGCGCAGTTATTGGGAAAACTGCTGATTGGGGCGAAGTGGCGAAGGACTGCGTGGCGTTTGCCAATGCAGCGGGCGG
CACACTAAGCATCGGAATTGAGGATGGCGAGAATCTGCCGCCACCCGAACAGCGAATTCCCCAAGATCTCCCGGATCTGA
TGCGGCGCAAGCTCACGGAGAGGACCGTTAACGTAACCGTGTTGCCAAATGTCGCAACCGCGGCAAACGGCGGCCAGTAC
ATCAAGCTCACTGTTCCGCGGTCAACTGCAGTCGCCTCAACTACGGATGGACGTTATTACCTTCGCGTGGCTGACCAAAG
CAAACCGGTAACAGGTGATGACGTTTTGCGTTTAGCATCCGAACGCGCGGCGCTGCCTTGGGAAACGCAAACATCCTTGA
GTGTGCCTCGATCCGACGCCGAGCCCTCGAAACTCCAGGCCGTCGTAGCGGCTCTGCGAGGCTCAGACCGGGTCAAATCC
TCGGTGAAGGAGAAGACCCCCGACGAGTTACTGGATCATTACCAAATGACCCGAGGGGCCCTTCTCACCAATCTTGGTAT
CCTTTGTGTGGGACAACAGTTTCAGCGAGCGCAGTTGACAACCGCTCCTGTGGTTCAGTTCATTAAATACGACGAGCATG
GGCAAAAGGTGAACAAGCTGGTCTGGGATGATCACCTTCTGAACCCCATGGAGCTTATTGAGGTGGTTTGGCAGGAAGTA
CCTGATTTCAAAGAGTCCTATGAACTGCCCGACGGGCTCTTTCGTCAGAATGTGCCGGCGTTTGACGAAGTGGTGGTGCG
CGAACTGTTGGTCAATGCGCTAGTTCACCGACCCTATACGCAACGAGGCGACATATTCCTGAACTTGCATCCGGATCGAC
TGGAGGTCGTGAACCCGGGGCTGCTTCCTCTCGGCGTCACACCACAGAACGTGCTCCATACGACCGTACGACGCAATGAG
CATTTAGCACGACTTTTCCACGATCTCAGGCTGATGGAGCGGGAAGGCAGCGGTTACGACAAGATTTTTGAGGTGCTGCT
GTCTCATGGTCGCCCGGCACCCGAACTGCTCGAAGGTCACGATCGAGTGCAAGTCACCATACGCCGGCGTATCCTGAAGC
CGGAGATTATCGACTTTATCGCCAAAGCAGACGATACTTTCCAACTCACACAACGCGAGCGCATTGCTCTCGGCCTGCTT
GCCCAACATGATGCACTGACGGCTCGCGAGCTTGCCGCACAGCTTGAGCTTCCTTCAATCGAGGCGCTGCAGCCGTGGAT
CAAGCGGTTGTCAGAATGGCAATTGGTGCAAAGCGCCGGGCGAACCCAAGCGACCCGCTATTTTGTCGATCCAGCTCTGT
TGCGCCGACATGATTTCATAGGGGACACGACCCTGAAACGTATCGAACCGCATAGGCTGCTTGCCCTTATCATTGAAGAC
GTCAGGCGGTATCCAGGGTCAAAGATTGGAGACATTCACAAACGGGTTGGCCTGGAAATCCCACGGTCCCGGATTCGAAG
AAGTGTCGAACAGCTGGTAAGGGACGGCAGTTTGCAGCCGAAGGGCATTCGGAGTGGTACACGTTACAGCCTCACGTAG

Upstream 100 bases:

>100_bases
GTAATGCGCGTAGACCGTCACTCACCTCTGCGCGTGGAGCGCACGAGAGACAGGGGGATTAGCTTTGAGTTTAGAGGGTC
AGCTCCACGACCAAAAATCC

Downstream 100 bases:

>100_bases
TTTGGCGCAAAAAGGAGCCTATCCGGCAATCATGAGCCAAAATCTTGTGCCAAATCGCTCGACGTATCACACTAACGATC
TGAAAAATCGATGCATTTTG

Product: ATP-dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MRAVIGKTADWGEVAKDCVAFANAAGGTLSIGIEDGENLPPPEQRIPQDLPDLMRRKLTERTVNVTVLPNVATAANGGQY
IKLTVPRSTAVASTTDGRYYLRVADQSKPVTGDDVLRLASERAALPWETQTSLSVPRSDAEPSKLQAVVAALRGSDRVKS
SVKEKTPDELLDHYQMTRGALLTNLGILCVGQQFQRAQLTTAPVVQFIKYDEHGQKVNKLVWDDHLLNPMELIEVVWQEV
PDFKESYELPDGLFRQNVPAFDEVVVRELLVNALVHRPYTQRGDIFLNLHPDRLEVVNPGLLPLGVTPQNVLHTTVRRNE
HLARLFHDLRLMEREGSGYDKIFEVLLSHGRPAPELLEGHDRVQVTIRRRILKPEIIDFIAKADDTFQLTQRERIALGLL
AQHDALTARELAAQLELPSIEALQPWIKRLSEWQLVQSAGRTQATRYFVDPALLRRHDFIGDTTLKRIEPHRLLALIIED
VRRYPGSKIGDIHKRVGLEIPRSRIRRSVEQLVRDGSLQPKGIRSGTRYSLT

Sequences:

>Translated_532_residues
MRAVIGKTADWGEVAKDCVAFANAAGGTLSIGIEDGENLPPPEQRIPQDLPDLMRRKLTERTVNVTVLPNVATAANGGQY
IKLTVPRSTAVASTTDGRYYLRVADQSKPVTGDDVLRLASERAALPWETQTSLSVPRSDAEPSKLQAVVAALRGSDRVKS
SVKEKTPDELLDHYQMTRGALLTNLGILCVGQQFQRAQLTTAPVVQFIKYDEHGQKVNKLVWDDHLLNPMELIEVVWQEV
PDFKESYELPDGLFRQNVPAFDEVVVRELLVNALVHRPYTQRGDIFLNLHPDRLEVVNPGLLPLGVTPQNVLHTTVRRNE
HLARLFHDLRLMEREGSGYDKIFEVLLSHGRPAPELLEGHDRVQVTIRRRILKPEIIDFIAKADDTFQLTQRERIALGLL
AQHDALTARELAAQLELPSIEALQPWIKRLSEWQLVQSAGRTQATRYFVDPALLRRHDFIGDTTLKRIEPHRLLALIIED
VRRYPGSKIGDIHKRVGLEIPRSRIRRSVEQLVRDGSLQPKGIRSGTRYSLT
>Mature_532_residues
MRAVIGKTADWGEVAKDCVAFANAAGGTLSIGIEDGENLPPPEQRIPQDLPDLMRRKLTERTVNVTVLPNVATAANGGQY
IKLTVPRSTAVASTTDGRYYLRVADQSKPVTGDDVLRLASERAALPWETQTSLSVPRSDAEPSKLQAVVAALRGSDRVKS
SVKEKTPDELLDHYQMTRGALLTNLGILCVGQQFQRAQLTTAPVVQFIKYDEHGQKVNKLVWDDHLLNPMELIEVVWQEV
PDFKESYELPDGLFRQNVPAFDEVVVRELLVNALVHRPYTQRGDIFLNLHPDRLEVVNPGLLPLGVTPQNVLHTTVRRNE
HLARLFHDLRLMEREGSGYDKIFEVLLSHGRPAPELLEGHDRVQVTIRRRILKPEIIDFIAKADDTFQLTQRERIALGLL
AQHDALTARELAAQLELPSIEALQPWIKRLSEWQLVQSAGRTQATRYFVDPALLRRHDFIGDTTLKRIEPHRLLALIIED
VRRYPGSKIGDIHKRVGLEIPRSRIRRSVEQLVRDGSLQPKGIRSGTRYSLT

Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR014021
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00270 DEAD; PF01336 tRNA_anti [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 59945; Mature: 59945

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVIGKTADWGEVAKDCVAFANAAGGTLSIGIEDGENLPPPEQRIPQDLPDLMRRKLTE
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHH
RTVNVTVLPNVATAANGGQYIKLTVPRSTAVASTTDGRYYLRVADQSKPVTGDDVLRLAS
HEEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHH
ERAALPWETQTSLSVPRSDAEPSKLQAVVAALRGSDRVKSSVKEKTPDELLDHYQMTRGA
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH
LLTNLGILCVGQQFQRAQLTTAPVVQFIKYDEHGQKVNKLVWDDHLLNPMELIEVVWQEV
HHHHCCHHEECCHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
PDFKESYELPDGLFRQNVPAFDEVVVRELLVNALVHRPYTQRGDIFLNLHPDRLEVVNPG
CCHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHEECCC
LLPLGVTPQNVLHTTVRRNEHLARLFHDLRLMEREGSGYDKIFEVLLSHGRPAPELLEGH
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCC
DRVQVTIRRRILKPEIIDFIAKADDTFQLTQRERIALGLLAQHDALTARELAAQLELPSI
CCEEHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EALQPWIKRLSEWQLVQSAGRTQATRYFVDPALLRRHDFIGDTTLKRIEPHRLLALIIED
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHH
VRRYPGSKIGDIHKRVGLEIPRSRIRRSVEQLVRDGSLQPKGIRSGTRYSLT
HHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAVIGKTADWGEVAKDCVAFANAAGGTLSIGIEDGENLPPPEQRIPQDLPDLMRRKLTE
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHH
RTVNVTVLPNVATAANGGQYIKLTVPRSTAVASTTDGRYYLRVADQSKPVTGDDVLRLAS
HEEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHH
ERAALPWETQTSLSVPRSDAEPSKLQAVVAALRGSDRVKSSVKEKTPDELLDHYQMTRGA
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH
LLTNLGILCVGQQFQRAQLTTAPVVQFIKYDEHGQKVNKLVWDDHLLNPMELIEVVWQEV
HHHHCCHHEECCHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
PDFKESYELPDGLFRQNVPAFDEVVVRELLVNALVHRPYTQRGDIFLNLHPDRLEVVNPG
CCHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHEECCC
LLPLGVTPQNVLHTTVRRNEHLARLFHDLRLMEREGSGYDKIFEVLLSHGRPAPELLEGH
CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCC
DRVQVTIRRRILKPEIIDFIAKADDTFQLTQRERIALGLLAQHDALTARELAAQLELPSI
CCEEHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EALQPWIKRLSEWQLVQSAGRTQATRYFVDPALLRRHDFIGDTTLKRIEPHRLLALIIED
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHH
VRRYPGSKIGDIHKRVGLEIPRSRIRRSVEQLVRDGSLQPKGIRSGTRYSLT
HHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9603897 [H]