| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is tauA [C]
Identifier: 190894446
GI number: 190894446
Start: 106159
End: 107232
Strand: Reverse
Name: tauA [C]
Synonym: RHECIAT_PC0000108
Alternate gene names: 190894446
Gene position: 107232-106159 (Counterclockwise)
Preceding gene: 190894447
Following gene: 190894445
Centisome position: 9.82
GC content: 61.08
Gene sequence:
>1074_bases ATGCAGACTTTTTCGAAGATTCTTTCCATAGCGGCCCTTTCGGTATCGTTGGCTTTCGGGTTCGGCTCTGCCGCCGGGGC GGCGCCGAAAACCAGCTTCAAGGTCGCCTGGTCGATCTATGTCGGCTGGATGCCCTGGGGCTATGCGAGCGACCACGGCA TCGTCAAGAAATGGGCCGATAAATATGGCATCAACATCGAAGTCACCCAGTTCAACGACTACGTCGAGTCGATGAACCAG TATACGGCGGGCGCCTTCGATGCCGTGACGCTCACCAATATGGACGGTCTCTCGATCCCGGCCGCCGGCGGGGTCGACAC GACCGCCGTCATCGTCGGCGACTTTTCGAACGGCAACGACGCCGTGATTCTGAAGGACAAGGCGAGCCTCAGCGACATCA AGGGCCAGAACGTCAATCTCGTCGAGTTTTCCGTCTCGCATTATCTGCTTGCCCGTGCGCTAGAAAGCATCAAGCTCAGC GAGCGCGACGTGAAGGTGGTCAATACATCAGATGCCGACATGGTCGCGGCCTACAAGACGCCTGATGTCAGTGCCGTCGT CACCTGGAATCCACTCGTCTCCACGATTCTGGAGGATCCCAGCGCCAAGAAGGTTTTCGACAGTTCGCAGGTTCCGGGCG AGATCATCGACCTGATGGTCGCCAATACCGACGTGCTGAAGGACAATCCGAATTTCGGCAAGGCTCTCGCCGGCATCTGG TACGAGACGGCCGCGCTGCTGCGGGCCGATACCGCCGAGGGCAAAGCCGCCCGCGAAGCCATGGGCGCAGCATCCGGCAC CGATCTCGCCGGCTTCGAGGCGCAGCTGGCCGCGACCAAGCTCTTCGATAAACCGGCCGACGCCGTTGCCTTCACCGCCT CGCCCAGCCTGCCGAAGACCATGGATCTCGTCCGCGGCTTCCTCTTCGAGAAGGGCCTGCTCGGCAATGGCGCGCCGTCT GCCGATGTCATCGGCATCGAAATGCCTGACGGCAAGGTGCTGGGCGATGCCGGCAACGTGAAGCTGCGATTCACCGAGAC CTACATGAAGGCAGCGGCCGACGCCTCGCTCTGA
Upstream 100 bases:
>100_bases CACGGCGGGATAAAAGCCCGGGAGACCTCGTAAGCCAAGGGATTGGCGGCGCGATGGTCTTTGCCGATCCCTTTTTGAAA AAGCAAAAAGGGGAATTTCT
Downstream 100 bases:
>100_bases TCACAGCAGGGGCGCGGTTCGGCCGCGCCTCCTTTCTCTCCCAGCGGAGCAATTCCCATGCGTTGGATCAACACCAGGCC AAGCCGGGGCGCGCAGCTTG
Product: putative ABC transporter substrate-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Nitrate/Sulfonate/Bicarbonate ABC Transporter; NLPA Lipoprotein; NlpA Lipoprotein; Taurine Transport System Protein; ABC-Type Transport System Periplasmic Component; NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5 Like Family; ABC Transporter; NMT1/THI5-Like Domain-Containing Protein; ABC Transporter Periplasmic Protein; Nmt1/Thi5 Like Domain Protein
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MQTFSKILSIAALSVSLAFGFGSAAGAAPKTSFKVAWSIYVGWMPWGYASDHGIVKKWADKYGINIEVTQFNDYVESMNQ YTAGAFDAVTLTNMDGLSIPAAGGVDTTAVIVGDFSNGNDAVILKDKASLSDIKGQNVNLVEFSVSHYLLARALESIKLS ERDVKVVNTSDADMVAAYKTPDVSAVVTWNPLVSTILEDPSAKKVFDSSQVPGEIIDLMVANTDVLKDNPNFGKALAGIW YETAALLRADTAEGKAAREAMGAASGTDLAGFEAQLAATKLFDKPADAVAFTASPSLPKTMDLVRGFLFEKGLLGNGAPS ADVIGIEMPDGKVLGDAGNVKLRFTETYMKAAADASL
Sequences:
>Translated_357_residues MQTFSKILSIAALSVSLAFGFGSAAGAAPKTSFKVAWSIYVGWMPWGYASDHGIVKKWADKYGINIEVTQFNDYVESMNQ YTAGAFDAVTLTNMDGLSIPAAGGVDTTAVIVGDFSNGNDAVILKDKASLSDIKGQNVNLVEFSVSHYLLARALESIKLS ERDVKVVNTSDADMVAAYKTPDVSAVVTWNPLVSTILEDPSAKKVFDSSQVPGEIIDLMVANTDVLKDNPNFGKALAGIW YETAALLRADTAEGKAAREAMGAASGTDLAGFEAQLAATKLFDKPADAVAFTASPSLPKTMDLVRGFLFEKGLLGNGAPS ADVIGIEMPDGKVLGDAGNVKLRFTETYMKAAADASL >Mature_357_residues MQTFSKILSIAALSVSLAFGFGSAAGAAPKTSFKVAWSIYVGWMPWGYASDHGIVKKWADKYGINIEVTQFNDYVESMNQ YTAGAFDAVTLTNMDGLSIPAAGGVDTTAVIVGDFSNGNDAVILKDKASLSDIKGQNVNLVEFSVSHYLLARALESIKLS ERDVKVVNTSDADMVAAYKTPDVSAVVTWNPLVSTILEDPSAKKVFDSSQVPGEIIDLMVANTDVLKDNPNFGKALAGIW YETAALLRADTAEGKAAREAMGAASGTDLAGFEAQLAATKLFDKPADAVAFTASPSLPKTMDLVRGFLFEKGLLGNGAPS ADVIGIEMPDGKVLGDAGNVKLRFTETYMKAAADASL
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37635; Mature: 37635
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTFSKILSIAALSVSLAFGFGSAAGAAPKTSFKVAWSIYVGWMPWGYASDHGIVKKWAD CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHH KYGINIEVTQFNDYVESMNQYTAGAFDAVTLTNMDGLSIPAAGGVDTTAVIVGDFSNGND HHCCEEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCC AVILKDKASLSDIKGQNVNLVEFSVSHYLLARALESIKLSERDVKVVNTSDADMVAAYKT EEEEECCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECC PDVSAVVTWNPLVSTILEDPSAKKVFDSSQVPGEIIDLMVANTDVLKDNPNFGKALAGIW CCCEEEEECHHHHHHHHCCCCCHHHCCCCCCCHHHHHEEECCCEEECCCCCHHHHHHHHH YETAALLRADTAEGKAAREAMGAASGTDLAGFEAQLAATKLFDKPADAVAFTASPSLPKT HHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHH MDLVRGFLFEKGLLGNGAPSADVIGIEMPDGKVLGDAGNVKLRFTETYMKAAADASL HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEEEHHHHHHHHCCCC >Mature Secondary Structure MQTFSKILSIAALSVSLAFGFGSAAGAAPKTSFKVAWSIYVGWMPWGYASDHGIVKKWAD CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHH KYGINIEVTQFNDYVESMNQYTAGAFDAVTLTNMDGLSIPAAGGVDTTAVIVGDFSNGND HHCCEEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCC AVILKDKASLSDIKGQNVNLVEFSVSHYLLARALESIKLSERDVKVVNTSDADMVAAYKT EEEEECCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECC PDVSAVVTWNPLVSTILEDPSAKKVFDSSQVPGEIIDLMVANTDVLKDNPNFGKALAGIW CCCEEEEECHHHHHHHHCCCCCHHHCCCCCCCHHHHHEEECCCEEECCCCCHHHHHHHHH YETAALLRADTAEGKAAREAMGAASGTDLAGFEAQLAATKLFDKPADAVAFTASPSLPKT HHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHH MDLVRGFLFEKGLLGNGAPSADVIGIEMPDGKVLGDAGNVKLRFTETYMKAAADASL HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA