Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190894389

Identifier: 190894389

GI number: 190894389

Start: 49751

End: 50122

Strand: Reverse

Name: 190894389

Synonym: RHECIAT_PC0000050

Alternate gene names: NA

Gene position: 50122-49751 (Counterclockwise)

Preceding gene: 190894390

Following gene: 190894388

Centisome position: 4.59

GC content: 59.95

Gene sequence:

>372_bases
ATGAAATCGCTCAGCCCCCTCGCCGGCAAAACGATCCTCATCATCGGTGAGCCGAGCTTCCTTTCGGACGGCGCAAAACA
GGCATTGATCGCCTGTCAGGCTTCGGTTGCCGGGCCGGTCGTCGTCTCCAGCGCGATGGAATGCTTGAGCGAGGGGCTGG
TGTTTGAGGCTGCGATCATCGATGTCGGGATCTCCGATCAGGCGATGCTCTGGCTGAACGAATGGCTGGAGGCACGAGGG
ATCCCCTTCGTCTTTGCCCATGATCAGCGGTCCAAACCGCCTCCCGGCGGCTTTATCCTCAGCGACCGTCCCGCCGATAT
CGATGCGATGATCGCAGCTTTGTTCGGGCCGGACCTCTCCTATTATCACTGA

Upstream 100 bases:

>100_bases
GCTTGACTGTGTTAGGCACGAGGAAGCGGATGGGCTGAGGTTTCAATGGCCATTGGACAGCATGAGCACCGTCAAACCAA
AGCTAGTGTAGGCATCCGTC

Downstream 100 bases:

>100_bases
GGTGTCCGCTTGCGTACAGTTCGCCGAGGAGAGTTGAATCGGGTTTCGTCGAGTCCCATTATCAAACAGTACAAGGGGAA
ACCCTGGCATCAGGAACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAIIDVGISDQAMLWLNEWLEARG
IPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLSYYH

Sequences:

>Translated_123_residues
MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAIIDVGISDQAMLWLNEWLEARG
IPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLSYYH
>Mature_123_residues
MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAIIDVGISDQAMLWLNEWLEARG
IPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLSYYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13046; Mature: 13046

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAII
CCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEE
DVGISDQAMLWLNEWLEARGIPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLS
ECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC
YYH
CCC
>Mature Secondary Structure
MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAII
CCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEE
DVGISDQAMLWLNEWLEARGIPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLS
ECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC
YYH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA