| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894389
Identifier: 190894389
GI number: 190894389
Start: 49751
End: 50122
Strand: Reverse
Name: 190894389
Synonym: RHECIAT_PC0000050
Alternate gene names: NA
Gene position: 50122-49751 (Counterclockwise)
Preceding gene: 190894390
Following gene: 190894388
Centisome position: 4.59
GC content: 59.95
Gene sequence:
>372_bases ATGAAATCGCTCAGCCCCCTCGCCGGCAAAACGATCCTCATCATCGGTGAGCCGAGCTTCCTTTCGGACGGCGCAAAACA GGCATTGATCGCCTGTCAGGCTTCGGTTGCCGGGCCGGTCGTCGTCTCCAGCGCGATGGAATGCTTGAGCGAGGGGCTGG TGTTTGAGGCTGCGATCATCGATGTCGGGATCTCCGATCAGGCGATGCTCTGGCTGAACGAATGGCTGGAGGCACGAGGG ATCCCCTTCGTCTTTGCCCATGATCAGCGGTCCAAACCGCCTCCCGGCGGCTTTATCCTCAGCGACCGTCCCGCCGATAT CGATGCGATGATCGCAGCTTTGTTCGGGCCGGACCTCTCCTATTATCACTGA
Upstream 100 bases:
>100_bases GCTTGACTGTGTTAGGCACGAGGAAGCGGATGGGCTGAGGTTTCAATGGCCATTGGACAGCATGAGCACCGTCAAACCAA AGCTAGTGTAGGCATCCGTC
Downstream 100 bases:
>100_bases GGTGTCCGCTTGCGTACAGTTCGCCGAGGAGAGTTGAATCGGGTTTCGTCGAGTCCCATTATCAAACAGTACAAGGGGAA ACCCTGGCATCAGGAACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAIIDVGISDQAMLWLNEWLEARG IPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLSYYH
Sequences:
>Translated_123_residues MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAIIDVGISDQAMLWLNEWLEARG IPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLSYYH >Mature_123_residues MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAIIDVGISDQAMLWLNEWLEARG IPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLSYYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13046; Mature: 13046
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAII CCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEE DVGISDQAMLWLNEWLEARGIPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLS ECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC YYH CCC >Mature Secondary Structure MKSLSPLAGKTILIIGEPSFLSDGAKQALIACQASVAGPVVVSSAMECLSEGLVFEAAII CCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEE DVGISDQAMLWLNEWLEARGIPFVFAHDQRSKPPPGGFILSDRPADIDAMIAALFGPDLS ECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC YYH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA