Click here to switch to the map view.

The map label for this gene is 190894388

Identifier: 190894388

GI number: 190894388

Start: 49363

End: 49647

Strand: Reverse

Name: 190894388

Synonym: RHECIAT_PC0000049

Alternate gene names: NA

Gene position: 49647-49363 (Counterclockwise)

Preceding gene: 190894389

Following gene: 190894386

Centisome position: 4.55

GC content: 61.05

Gene sequence:

>285_bases
ATGCCCGACTGTCAGTCCATTCACCTGAAAGCGTTGGATTCGGCCGATCTCAGCCGATTGCGGGGCATCTTGAATGTGAT
CTGCTCCGAAGCCGGTGAACCGTTGCGCGGGCCTGCGATGCAAAGGATCGCGGTATTGCTGATCGGGCTCTATCGTCACG
GTGTGACGGACGACGACAAGCTGCTGTCGGTCGGTCGTCTGGCCCTGACCCAGAAGGCGCCTGCTGTGACCGCAGCGGTC
ATATCCGGCGTCCGCAAGTCCGAAGGCGGAATGGCCGAATCGTAG

Upstream 100 bases:

>100_bases
GTCCGCTTGCGTACAGTTCGCCGAGGAGAGTTGAATCGGGTTTCGTCGAGTCCCATTATCAAACAGTACAAGGGGAAACC
CTGGCATCAGGAACGGTGCG

Downstream 100 bases:

>100_bases
AGTAGAATACCGGCCGCGCATCGACATCAGCGCGCAAGGTGCCTGCCGATCAAACGCCGATATTCCTCCTCAGCCGCCCC
ATAGGAACCGTGCGCCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MPDCQSIHLKALDSADLSRLRGILNVICSEAGEPLRGPAMQRIAVLLIGLYRHGVTDDDKLLSVGRLALTQKAPAVTAAV
ISGVRKSEGGMAES

Sequences:

>Translated_94_residues
MPDCQSIHLKALDSADLSRLRGILNVICSEAGEPLRGPAMQRIAVLLIGLYRHGVTDDDKLLSVGRLALTQKAPAVTAAV
ISGVRKSEGGMAES
>Mature_93_residues
PDCQSIHLKALDSADLSRLRGILNVICSEAGEPLRGPAMQRIAVLLIGLYRHGVTDDDKLLSVGRLALTQKAPAVTAAVI
SGVRKSEGGMAES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9895; Mature: 9763

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDCQSIHLKALDSADLSRLRGILNVICSEAGEPLRGPAMQRIAVLLIGLYRHGVTDDDK
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
LLSVGRLALTQKAPAVTAAVISGVRKSEGGMAES
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PDCQSIHLKALDSADLSRLRGILNVICSEAGEPLRGPAMQRIAVLLIGLYRHGVTDDDK
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
LLSVGRLALTQKAPAVTAAVISGVRKSEGGMAES
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA