| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894381
Identifier: 190894381
GI number: 190894381
Start: 44223
End: 44867
Strand: Reverse
Name: 190894381
Synonym: RHECIAT_PC0000042
Alternate gene names: NA
Gene position: 44867-44223 (Counterclockwise)
Preceding gene: 190894382
Following gene: 190894378
Centisome position: 4.11
GC content: 65.43
Gene sequence:
>645_bases GTGACAAAGACGGACGACATCATCGAACGCCTGGCAAGCGGCCTGAAGCCGGTGCCGCGCCATGCACTGCGGCGCCGCTT CGCGCTCGGCATAATCCCCGCCCTCGGGCTCTCCCTGCTGCTGATGCTGATCATTCTCGGCCTCAGGATCGATATGCCTG ACGTGCTGATGCTGCCGGTCTTCTGGATCAAGTCGGCCTATAATGCCCTGATCGCGGCGGCGGCCTTTGCTGCCGTTTTT CGGCTTTCCCGCCCCGACGGCTCCGAGGGACGGTTTTTCGCGCTGCTTGCCCTGATCTTTGCCGCCATGGCGGCTGTTGC TGCCATCCAGCTCCTGCTGGCGCCGATCGAGACCTACCGGGTGCTGATCCTTGGGTCCTCGGCGCTGCATTGCCCGCTGC TCATCATCGGCTTCGCCATCCCCATCTACGCCGGCGCGGTCTGGGCGCTGCGCCAGGCAGCACCCGTGGATTTGCGGTTG ACCGGCTTCGTGGCCGGCATCGCCGCGGGAGCCGCCGGCGCCTGGGTCTATTCCTGGTTCTGCACCGAAAACGGCATGCC TTTCGTGCTGATCTGGTACACGCTCGGTATCCTGATCACGGGCGCTCTCGGCGCCCTTACCGGGCCTCGCCTGCTTCGCT GGTGA
Upstream 100 bases:
>100_bases TCGCCGACACCGCAACCCGCACCGGCCAGTCTGAATCGGCGGTGAAAGTCGGTATCCATCGGGCGCTCAAGGCGCTCGGG GAGAGATTGCGAGGCGTATC
Downstream 100 bases:
>100_bases AGCCCTTGTTACCCTGTTGACTGGAACATTCCGCCTTTCGGCTGGTTCGAGAGCCGAAGGAGAGGAAGATGAACCACGAA TCGGATCGTCGCGCTTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTKTDDIIERLASGLKPVPRHALRRRFALGIIPALGLSLLLMLIILGLRIDMPDVLMLPVFWIKSAYNALIAAAAFAAVF RLSRPDGSEGRFFALLALIFAAMAAVAAIQLLLAPIETYRVLILGSSALHCPLLIIGFAIPIYAGAVWALRQAAPVDLRL TGFVAGIAAGAAGAWVYSWFCTENGMPFVLIWYTLGILITGALGALTGPRLLRW
Sequences:
>Translated_214_residues MTKTDDIIERLASGLKPVPRHALRRRFALGIIPALGLSLLLMLIILGLRIDMPDVLMLPVFWIKSAYNALIAAAAFAAVF RLSRPDGSEGRFFALLALIFAAMAAVAAIQLLLAPIETYRVLILGSSALHCPLLIIGFAIPIYAGAVWALRQAAPVDLRL TGFVAGIAAGAAGAWVYSWFCTENGMPFVLIWYTLGILITGALGALTGPRLLRW >Mature_213_residues TKTDDIIERLASGLKPVPRHALRRRFALGIIPALGLSLLLMLIILGLRIDMPDVLMLPVFWIKSAYNALIAAAAFAAVFR LSRPDGSEGRFFALLALIFAAMAAVAAIQLLLAPIETYRVLILGSSALHCPLLIIGFAIPIYAGAVWALRQAAPVDLRLT GFVAGIAAGAAGAWVYSWFCTENGMPFVLIWYTLGILITGALGALTGPRLLRW
Specific function: Unknown
COG id: COG4944
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23011; Mature: 22880
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTDDIIERLASGLKPVPRHALRRRFALGIIPALGLSLLLMLIILGLRIDMPDVLMLPV CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FWIKSAYNALIAAAAFAAVFRLSRPDGSEGRFFALLALIFAAMAAVAAIQLLLAPIETYR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLILGSSALHCPLLIIGFAIPIYAGAVWALRQAAPVDLRLTGFVAGIAAGAAGAWVYSWF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHEE CTENGMPFVLIWYTLGILITGALGALTGPRLLRW ECCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure TKTDDIIERLASGLKPVPRHALRRRFALGIIPALGLSLLLMLIILGLRIDMPDVLMLPV CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FWIKSAYNALIAAAAFAAVFRLSRPDGSEGRFFALLALIFAAMAAVAAIQLLLAPIETYR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLILGSSALHCPLLIIGFAIPIYAGAVWALRQAAPVDLRLTGFVAGIAAGAAGAWVYSWF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHEE CTENGMPFVLIWYTLGILITGALGALTGPRLLRW ECCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA