| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894350
Identifier: 190894350
GI number: 190894350
Start: 10416
End: 10946
Strand: Reverse
Name: 190894350
Synonym: RHECIAT_PC0000010
Alternate gene names: NA
Gene position: 10946-10416 (Counterclockwise)
Preceding gene: 190894351
Following gene: 190894348
Centisome position: 1.0
GC content: 65.35
Gene sequence:
>531_bases ATGTTCGCGATGCTCGCGCTCGGCTCGGCATGGCCGGTGTCCGGCGCCTTCGCTGCGGCGCAGCCGATCTTCTGGAGCGC CTTGCGGCCGGCCGATCAGGCCAGGGCGACAGTTCCGCTGTCGCCGAAAACAGTCAGCGGCCCGCAGAGCGAAACCCTCG TTTGGCGTAACGAGAGCCAACCGATCGAACTGACGGGCTTTGTCCTGCCGATCGATCAGGACTGCGATCTCGTCTATGAA TTCCTGCTGGTGCCTTGGGCCGGGGCCTGCAGCCACATGCCCAGGCCGCCGCCCAACCAGCTGGTCCGTGTCATCCCGCA GGAGCCTCTGCACCTTGAAAAAATCCATGAGACCGTCACCGTGACGGGCGCGCTGCGGCCCGGCCTGGATCAGGCGCAGT TCTTTATGATCGACGGCGTCCGCGTCCTGTCCTACGGCTACAGCATCGGCCATGCCGAGGTGGCGAAGGCGACGGCGACG AAAGATCCCGATCTGCTGTCGCTTTCGCCGTTTGGGGTCGTGCCGCGCTAG
Upstream 100 bases:
>100_bases GGAGCTTTGATGGGCAAGCGGTATCGGCTAGCATCCTTGGGCAGCGGCAAGACTCAAGCGGCGGGCCCGGGGAGATGCGA TAATAAAGCACAGATTCCTG
Downstream 100 bases:
>100_bases CGGAGAGGGCAAGTGCCTTCTTCAGGCATACGCTTTCCGCTCGCGTCAGATGTCGAAGGCGCTCGGCAAGATCACTACGT CACGTATGGTCACATTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MFAMLALGSAWPVSGAFAAAQPIFWSALRPADQARATVPLSPKTVSGPQSETLVWRNESQPIELTGFVLPIDQDCDLVYE FLLVPWAGACSHMPRPPPNQLVRVIPQEPLHLEKIHETVTVTGALRPGLDQAQFFMIDGVRVLSYGYSIGHAEVAKATAT KDPDLLSLSPFGVVPR
Sequences:
>Translated_176_residues MFAMLALGSAWPVSGAFAAAQPIFWSALRPADQARATVPLSPKTVSGPQSETLVWRNESQPIELTGFVLPIDQDCDLVYE FLLVPWAGACSHMPRPPPNQLVRVIPQEPLHLEKIHETVTVTGALRPGLDQAQFFMIDGVRVLSYGYSIGHAEVAKATAT KDPDLLSLSPFGVVPR >Mature_176_residues MFAMLALGSAWPVSGAFAAAQPIFWSALRPADQARATVPLSPKTVSGPQSETLVWRNESQPIELTGFVLPIDQDCDLVYE FLLVPWAGACSHMPRPPPNQLVRVIPQEPLHLEKIHETVTVTGALRPGLDQAQFFMIDGVRVLSYGYSIGHAEVAKATAT KDPDLLSLSPFGVVPR
Specific function: Unknown
COG id: COG3495
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19113; Mature: 19113
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAMLALGSAWPVSGAFAAAQPIFWSALRPADQARATVPLSPKTVSGPQSETLVWRNESQ CEEEEECCCCCCCCCCHHHHCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCC PIELTGFVLPIDQDCDLVYEFLLVPWAGACSHMPRPPPNQLVRVIPQEPLHLEKIHETVT CEEEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHEECCCCCCHHHHHHHEEE VTGALRPGLDQAQFFMIDGVRVLSYGYSIGHAEVAKATATKDPDLLSLSPFGVVPR EEECCCCCCCCCEEEEECCEEEEHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCC >Mature Secondary Structure MFAMLALGSAWPVSGAFAAAQPIFWSALRPADQARATVPLSPKTVSGPQSETLVWRNESQ CEEEEECCCCCCCCCCHHHHCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCC PIELTGFVLPIDQDCDLVYEFLLVPWAGACSHMPRPPPNQLVRVIPQEPLHLEKIHETVT CEEEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHEECCCCCCHHHHHHHEEE VTGALRPGLDQAQFFMIDGVRVLSYGYSIGHAEVAKATATKDPDLLSLSPFGVVPR EEECCCCCCCCCEEEEECCEEEEHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA