Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190894348

Identifier: 190894348

GI number: 190894348

Start: 9138

End: 9611

Strand: Reverse

Name: 190894348

Synonym: RHECIAT_PC0000008

Alternate gene names: NA

Gene position: 9611-9138 (Counterclockwise)

Preceding gene: 190894350

Following gene: 190894346

Centisome position: 0.88

GC content: 60.34

Gene sequence:

>474_bases
ATGCGAGGTCGGTCATGGCTAGAAGTTCGCGGCTGGCGGGCATGGTCAGGACGATCGGGCGGTGGTGCGCTGGGTGCTTC
AGCGCGGGAGAGAATGCCTGACCTCTCGTCCGTCATACTCGGGCTTGTCCCGAGTATCTGCCTCCGGTCGATAGGGCAGC
AGATCCTCGGCACAAGGCCGAGGACGACGCCGAGTAAAAATGAAACGGCTGCGGAAAATTGGCCGGAGGCCAACCCCACA
CTCCTCACGAAATCAGGTCATGTGGACATAGGCACCACCTCTCCGCCGTCATTCCTGTGCTCGTCACAGGAATCCAGCCA
CTGCGCGGTGAATGACTTACTGCCAGGCAAAGGAGTCTTCTGCGCCCAAGCACTCTTGGGCGCGCTGGATCCCTGTGACA
TCCCTCGGGTGAAGCCTGAGGCTACAGGGATGACGGCGGAGAGATGCCCATATCCACCTGATCTGACTTGGTGA

Upstream 100 bases:

>100_bases
TCGTCGCCAATCCAATGCCCGAGGCAGCGCCGGTGATGGCGGCGATTTTACCCTGCAAACCGTCCATATCCACTCCTCCA
CTGTGTCGACCATCTATCGC

Downstream 100 bases:

>100_bases
GACAGGAGAATGAACACCTTGAGCAATACAAGGGATCCCATACAGCCAAAAAAACGGGCGCGGCCGAAACCGCGCCCGGG
CAAAATAAGCTCAAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRPRTTPSKNETAAENWPEANPT
LLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVFCAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW

Sequences:

>Translated_157_residues
MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRPRTTPSKNETAAENWPEANPT
LLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVFCAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW
>Mature_157_residues
MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRPRTTPSKNETAAENWPEANPT
LLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVFCAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16755; Mature: 16755

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRP
CCCCCCEEECCEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RTTPSKNETAAENWPEANPTLLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVF
CCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCHHHEECCCCCCCCCHHHCCCCCCHH
CAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW
HHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRP
CCCCCCEEECCEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
RTTPSKNETAAENWPEANPTLLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVF
CCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCHHHEECCCCCCCCCHHHCCCCCCHH
CAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW
HHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA