Click here to switch to the map view.

The map label for this gene is ycfF [C]

Identifier: 190571250

GI number: 190571250

Start: 927070

End: 927438

Strand: Direct

Name: ycfF [C]

Synonym: WPa_0851

Alternate gene names: 190571250

Gene position: 927070-927438 (Clockwise)

Preceding gene: 190571249

Following gene: 190571251

Centisome position: 62.54

GC content: 31.71

Gene sequence:

>369_bases
ATGGGTAGTACAGCTTATGATGACAATAATATCTTTGCTAAGATATTAAGAGGTGAGTTGTCTTATGAGGAAATACATAA
AAATGAAAATGTGCTGGCTTTTCGTGATAAGTATCCTGATGCACCAGTTCATATTCTAGTTATACCAAAAGCTCAATACG
TTTCATACGATGATTTTGTTCTGAAAGCTTCCGAAGAGGAAATAGTAAGTTTTTTTAAAACTGTTAGAGAAATAGCACAT
AAATATAACTTAGAAAAAACAGGATATAGATTAGTTACTAATCACGGTAAAGATGGAGAGCAAGTTATACCGCACTTTCA
CATACATATTTTAGGTGGTAAAAGATTAGGAAAGCATGTAAATTCATAG

Upstream 100 bases:

>100_bases
CGTTTCAAGTCTTGAAGATGCTTCTAGCGAAGCAGCAATAAGCCCACCTTCTACACCAAATCATAAGCAAAATAGAAGAG
GACCAGGAATTTAATAAAGT

Downstream 100 bases:

>100_bases
TGTTATATGTTTTTTAAATGAGTGAATATTTAACCATATTAATTTTTATCTGTGTATCAATTGTAGTATCCTTTACTTTA
GGTGTATTACCTATGTTTCT

Product: HIT family protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MGSTAYDDNNIFAKILRGELSYEEIHKNENVLAFRDKYPDAPVHILVIPKAQYVSYDDFVLKASEEEIVSFFKTVREIAH
KYNLEKTGYRLVTNHGKDGEQVIPHFHIHILGGKRLGKHVNS

Sequences:

>Translated_122_residues
MGSTAYDDNNIFAKILRGELSYEEIHKNENVLAFRDKYPDAPVHILVIPKAQYVSYDDFVLKASEEEIVSFFKTVREIAH
KYNLEKTGYRLVTNHGKDGEQVIPHFHIHILGGKRLGKHVNS
>Mature_121_residues
GSTAYDDNNIFAKILRGELSYEEIHKNENVLAFRDKYPDAPVHILVIPKAQYVSYDDFVLKASEEEIVSFFKTVREIAHK
YNLEKTGYRLVTNHGKDGEQVIPHFHIHILGGKRLGKHVNS

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=109, Percent_Identity=37.6146788990826, Blast_Score=74, Evalue=3e-14,
Organism=Homo sapiens, GI14211923, Length=109, Percent_Identity=38.5321100917431, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787346, Length=110, Percent_Identity=35.4545454545455, Blast_Score=67, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17506713, Length=109, Percent_Identity=36.697247706422, Blast_Score=79, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28574010, Length=118, Percent_Identity=36.4406779661017, Blast_Score=76, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581222, Length=118, Percent_Identity=36.4406779661017, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14025; Mature: 13894

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSTAYDDNNIFAKILRGELSYEEIHKNENVLAFRDKYPDAPVHILVIPKAQYVSYDDFV
CCCCCCCCCCHHEEHHHCCCCHHHHHCCCCEEEEECCCCCCCEEEEEECCHHHCCCCCEE
LKASEEEIVSFFKTVREIAHKYNLEKTGYRLVTNHGKDGEQVIPHFHIHILGGKRLGKHV
EECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCEEEEEEECCHHHCCCC
NS
CC
>Mature Secondary Structure 
GSTAYDDNNIFAKILRGELSYEEIHKNENVLAFRDKYPDAPVHILVIPKAQYVSYDDFV
CCCCCCCCCHHEEHHHCCCCHHHHHCCCCEEEEECCCCCCCEEEEEECCHHHCCCCCEE
LKASEEEIVSFFKTVREIAHKYNLEKTGYRLVTNHGKDGEQVIPHFHIHILGGKRLGKHV
EECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCEEEEEEECCHHHCCCC
NS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664449; 1472710 [H]