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The map label for this gene is petC [H]

Identifier: 190571137

GI number: 190571137

Start: 801892

End: 802653

Strand: Direct

Name: petC [H]

Synonym: WPa_0735

Alternate gene names: 190571137

Gene position: 801892-802653 (Clockwise)

Preceding gene: 190571136

Following gene: 190571138

Centisome position: 54.09

GC content: 37.4

Gene sequence:

>762_bases
ATGCTGTTGATTAAAGTTGCTGTATTTTGTATATTACTTCTCACTAATTCTTTGTCTGCAGAGGAGTTTAAACCTTTACC
AAATAAGAAAATCGACTGGAGTTTTGATGGAATTACTGGATCTTTCGATAGAGAGTCAATTCAGCGTGGCTATAAAGTAT
ACAAGGAAGTCTGTGCTGCTTGCCATTCAATGAATAGAATAGCGTTTCGTAATTTGCAAGATGTTGGTTTTTCTGAAGAG
GATGTAAAACAAATTGCAGCCTCTTACCAAGTTAAAGATGGTCCGAATGATTTGGGTGAAATGTTTGATAGGCCGGGAGT
GTCTTCGGATTATTTTATTGCACCTTTTGACACAAAAGAAGCAGCTGCAGCAAGCAACAATGGAGCAATTCCACCGGACT
TATCATTAATTGTCAAAGCAAGACATGATGGTGCAAATTATGTCTATTCACTACTAATTGGTTATCAAAACGGTGAACAT
GATGAGAACGGTTTATATTTTAATCCATATTTTTCAACAGGCAGGTTAGCTATGGCCCCACCACTCTCTGAAGGAATGGT
AGAATATGATGGTACAAGGCAAGCCACAGTTGAAAATATGGCATATGATGTGGTAAATTTCTTACAATGGGCAGCAGAGC
CAGAACTGGAGCGCCGACATAAACTTGGGCTAAAAATAGTGACATATTTTATAATTTTGACGGTGTTTTTTGTATTAACC
AACAACAGGATTTGGAGCAGGCTCTATAAAAAGAAAAAATAG

Upstream 100 bases:

>100_bases
ATTTTTCATATTTTGTGATAGTTTTACCTTTACTTAGTAAGTATGAGAAACCAAAAAAATTACCGAAAACAATAAGCGAT
TCCGTTCCGGAGATGAAGTG

Downstream 100 bases:

>100_bases
AGTTTTTTATGTTCATTCTTTCATACCTTATTTACACTAGCAAATGTATTGTATAGTAATAAATACATTATGAAAATATA
AAGGTATGGAATTTCAAATA

Product: ubiquinol-cytochrome c reductase, cytochrome c1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLLIKVAVFCILLLTNSLSAEEFKPLPNKKIDWSFDGITGSFDRESIQRGYKVYKEVCAACHSMNRIAFRNLQDVGFSEE
DVKQIAASYQVKDGPNDLGEMFDRPGVSSDYFIAPFDTKEAAAASNNGAIPPDLSLIVKARHDGANYVYSLLIGYQNGEH
DENGLYFNPYFSTGRLAMAPPLSEGMVEYDGTRQATVENMAYDVVNFLQWAAEPELERRHKLGLKIVTYFIILTVFFVLT
NNRIWSRLYKKKK

Sequences:

>Translated_253_residues
MLLIKVAVFCILLLTNSLSAEEFKPLPNKKIDWSFDGITGSFDRESIQRGYKVYKEVCAACHSMNRIAFRNLQDVGFSEE
DVKQIAASYQVKDGPNDLGEMFDRPGVSSDYFIAPFDTKEAAAASNNGAIPPDLSLIVKARHDGANYVYSLLIGYQNGEH
DENGLYFNPYFSTGRLAMAPPLSEGMVEYDGTRQATVENMAYDVVNFLQWAAEPELERRHKLGLKIVTYFIILTVFFVLT
NNRIWSRLYKKKK
>Mature_253_residues
MLLIKVAVFCILLLTNSLSAEEFKPLPNKKIDWSFDGITGSFDRESIQRGYKVYKEVCAACHSMNRIAFRNLQDVGFSEE
DVKQIAASYQVKDGPNDLGEMFDRPGVSSDYFIAPFDTKEAAAASNNGAIPPDLSLIVKARHDGANYVYSLLIGYQNGEH
DENGLYFNPYFSTGRLAMAPPLSEGMVEYDGTRQATVENMAYDVVNFLQWAAEPELERRHKLGLKIVTYFIILTVFFVLT
NNRIWSRLYKKKK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21359867, Length=223, Percent_Identity=47.5336322869955, Blast_Score=209, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17506225, Length=239, Percent_Identity=41.0041841004184, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6324639, Length=248, Percent_Identity=44.758064516129, Blast_Score=205, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24658292, Length=223, Percent_Identity=44.3946188340807, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI21358225, Length=226, Percent_Identity=42.4778761061947, Blast_Score=180, Evalue=9e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: NA

Molecular weight: Translated: 28639; Mature: 28639

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIKVAVFCILLLTNSLSAEEFKPLPNKKIDWSFDGITGSFDRESIQRGYKVYKEVCAA
CHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
CHSMNRIAFRNLQDVGFSEEDVKQIAASYQVKDGPNDLGEMFDRPGVSSDYFIAPFDTKE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCHH
AAAASNNGAIPPDLSLIVKARHDGANYVYSLLIGYQNGEHDENGLYFNPYFSTGRLAMAP
HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEECC
PLSEGMVEYDGTRQATVENMAYDVVNFLQWAAEPELERRHKLGLKIVTYFIILTVFFVLT
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NNRIWSRLYKKKK
CCHHHHHHHHCCC
>Mature Secondary Structure
MLLIKVAVFCILLLTNSLSAEEFKPLPNKKIDWSFDGITGSFDRESIQRGYKVYKEVCAA
CHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
CHSMNRIAFRNLQDVGFSEEDVKQIAASYQVKDGPNDLGEMFDRPGVSSDYFIAPFDTKE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCHH
AAAASNNGAIPPDLSLIVKARHDGANYVYSLLIGYQNGEHDENGLYFNPYFSTGRLAMAP
HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEECC
PLSEGMVEYDGTRQATVENMAYDVVNFLQWAAEPELERRHKLGLKIVTYFIILTVFFVLT
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NNRIWSRLYKKKK
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]