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The map label for this gene is petB [H]

Identifier: 190571136

GI number: 190571136

Start: 800666

End: 801892

Strand: Direct

Name: petB [H]

Synonym: WPa_0734

Alternate gene names: 190571136

Gene position: 800666-801892 (Clockwise)

Preceding gene: 190571135

Following gene: 190571137

Centisome position: 54.01

GC content: 34.64

Gene sequence:

>1227_bases
ATGGAAGATGATAGCAAAAAAGAAATAATAGAAGAAAAAGGTATATTAGGTTGGATAGAATATAGACTGCCTATATTTTC
TTTTCTAAAACATATTGCTTCTTATCAAGTACCAAAAAATTTAAATTATGCTTGGAATTTTGGTTCTTTGGCTGGTATAG
CGCTGATTTTACAAATAATAACAGGTATATTTCTTGCTATGCACTATACTCCGCATGTTGATTACGCGTTTAATAGCGTG
GAGCGTATAATGCGTGACGTAAGTTACGGATGGCTAATACGCTATACTCATGCTGTTGGGGCGTCACTCTTCTTTATGGT
GGTCTATGTTCATATCATGCGTGGATTATATTACGGATCTTATAAGAGACCGCGAGAAATGGTATGGTTTATTGGCATAT
TTATATTTTTTGCAATGATGGCAACTGCCTTTATGGGATATGTTCTTCCATGGGGACAAATGAGTTTTTGGGGTGCAACA
GTTATAACTACTTTATTCTCGGCTATACCTTTAATTGGTGATAAAATAGTTATATGGCTATGGGGAAGTTTCTCTGTTGA
TAATCCAACGCTCAATCGTTTTTTTGCGCTGCATTATCTTATGCCTTTCATTATTATCGCTTTAGCTATGTTGCATGTTG
TTGCTCTGCATAGGTTTGGCTCTAATAATCCAAGTGGAATAGAAGTCAGGTCAGATAAGGATACCATTCCTTTTTACCCT
TACTATATAGCAAAGGACTGCATAACTTTTGGTTTATTTTTTATAATTTTATTTGCATTTGTTTTTTATGCCCCTAATTA
TCTTGGGCATCCTGATAATTATATAGAGGCTGATCCTATGGTAACTCCAGTACATATAGTGCCAGAGTGGTATTTCTTAC
CTTTTTATGCGATGCTGCGTTCAATTCCAAATAAACTTATTGGTGTACTTACCATGTTTGGATCTATTTTAGTGTGGTTT
CTTTTGCCTTGGCTTGATAAATCAAAGGTTAAAAGTGGTGCTTATCGCCCATTATTTAAGAAATTTTTTTGGGTTTTTGC
AATAAATTTTGCATTTCTTGCCTGGCTTGGGGGACAAGAAATTAAGGAGCCTTACATTACTTTAAGTAGGCTCTCAACTC
TTTATTATTTTTCATATTTTGTGATAGTTTTACCTTTACTTAGTAAGTATGAGAAACCAAAAAAATTACCGAAAACAATA
AGCGATTCCGTTCCGGAGATGAAGTGA

Upstream 100 bases:

>100_bases
CTTGTTTTTGTGAAATCTACTCTTTAAACTTAAACTTTTTATTGTTTATTAGCGTTAAATTGTTACAATACAATGAGTTA
AGATGACAAAGCTTTAAGTT

Downstream 100 bases:

>100_bases
TGCTGTTGATTAAAGTTGCTGTATTTTGTATATTACTTCTCACTAATTCTTTGTCTGCAGAGGAGTTTAAACCTTTACCA
AATAAGAAAATCGACTGGAG

Product: ubiquinol-cytochrome c reductase, cytochrome b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MEDDSKKEIIEEKGILGWIEYRLPIFSFLKHIASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDYAFNSV
ERIMRDVSYGWLIRYTHAVGASLFFMVVYVHIMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGAT
VITTLFSAIPLIGDKIVIWLWGSFSVDNPTLNRFFALHYLMPFIIIALAMLHVVALHRFGSNNPSGIEVRSDKDTIPFYP
YYIAKDCITFGLFFIILFAFVFYAPNYLGHPDNYIEADPMVTPVHIVPEWYFLPFYAMLRSIPNKLIGVLTMFGSILVWF
LLPWLDKSKVKSGAYRPLFKKFFWVFAINFAFLAWLGGQEIKEPYITLSRLSTLYYFSYFVIVLPLLSKYEKPKKLPKTI
SDSVPEMK

Sequences:

>Translated_408_residues
MEDDSKKEIIEEKGILGWIEYRLPIFSFLKHIASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDYAFNSV
ERIMRDVSYGWLIRYTHAVGASLFFMVVYVHIMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGAT
VITTLFSAIPLIGDKIVIWLWGSFSVDNPTLNRFFALHYLMPFIIIALAMLHVVALHRFGSNNPSGIEVRSDKDTIPFYP
YYIAKDCITFGLFFIILFAFVFYAPNYLGHPDNYIEADPMVTPVHIVPEWYFLPFYAMLRSIPNKLIGVLTMFGSILVWF
LLPWLDKSKVKSGAYRPLFKKFFWVFAINFAFLAWLGGQEIKEPYITLSRLSTLYYFSYFVIVLPLLSKYEKPKKLPKTI
SDSVPEMK
>Mature_408_residues
MEDDSKKEIIEEKGILGWIEYRLPIFSFLKHIASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDYAFNSV
ERIMRDVSYGWLIRYTHAVGASLFFMVVYVHIMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGAT
VITTLFSAIPLIGDKIVIWLWGSFSVDNPTLNRFFALHYLMPFIIIALAMLHVVALHRFGSNNPSGIEVRSDKDTIPFYP
YYIAKDCITFGLFFIILFAFVFYAPNYLGHPDNYIEADPMVTPVHIVPEWYFLPFYAMLRSIPNKLIGVLTMFGSILVWF
LLPWLDKSKVKSGAYRPLFKKFFWVFAINFAFLAWLGGQEIKEPYITLSRLSTLYYFSYFVIVLPLLSKYEKPKKLPKTI
SDSVPEMK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=370, Percent_Identity=51.3513513513513, Blast_Score=365, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6226529, Length=355, Percent_Identity=55.2112676056338, Blast_Score=392, Evalue=1e-110,
Organism=Saccharomyces cerevisiae, GI6226532, Length=233, Percent_Identity=57.9399141630901, Blast_Score=273, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=57.8947368421053, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6226530, Length=136, Percent_Identity=51.4705882352941, Blast_Score=144, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 47455; Mature: 47455

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]