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The map label for this gene is yjcF [C]

Identifier: 190571083

GI number: 190571083

Start: 745564

End: 747330

Strand: Direct

Name: yjcF [C]

Synonym: WPa_0678

Alternate gene names: 190571083

Gene position: 745564-747330 (Clockwise)

Preceding gene: 190571082

Following gene: 190571084

Centisome position: 50.29

GC content: 28.92

Gene sequence:

>1767_bases
ATGCAAAAGATAATTAGACTTTTGATATTAATTTTAGTTGGTCATTTATGCTATGGAGATGATGCAATCAATGATTTTTT
AAGTGCTCTGCACGATGTAAAATACATATCTTACAATACAAAAGATTTTGCTAAATTTTTAGTACAGTGTAATAAAGCCA
GCATACCACAAGATTTTAAGAAAGGTTTTGGTCCTAATTTAAATGGTGCTAATTTTAGTCAATTGTATTTAAGCAAATCT
ATTTTTGATGGAGTAAGTTTAATTGGTGCCGATTTTTCTAACACCGATTTATCAGATGTGTCTTTTATCGATGTTGATTT
GCGTGGTGCCAATTTTTCCAATGCTAATTTACATGGCGTTAAAATAAAAGGCACAAATTTAAGTTTTTCAAAATTTGCTT
CTACAAATTTAACAGATATCATATTTGATCAGTCTAATATCAGTTATGCTGATTTTATCAATTCTAATCTCAACAAAGTA
AGTATGCGTAATATAATTGGTTTGCATACCAAGTTTTTGAATGTAAAAATGAATTTCTCCAATTTATCAAACTCAAGTGC
AAGCTACATCAATTTTAGTGATAGTGAAATAAACGACACTGTTATGCAGAAAAATAATTTCGACAACGCAAGTTTCTTTG
GAGTGGATGCACATAAGCTCAAGGTACAATTTTCTTCATTAAAAAATGCTAACATATATGGTGCAGAAATAAAAAAATCG
GATTTTACAGGTAGCAATCTTTCAAACGCCTATTTTAATTCTTCCATTATAGTCAACAGTAATTTCGAAAAAGCCAATTT
AAGCAATTCACAAATTTCCTATGTGAAAGGGGATAATTCAAACTTCATTAAATCTATACTAAATGGTTCCAAGATAAAAC
ATGCATATGTTTTCGAAGCAGACCTTCAGGATGCTGATTTATCTAATATTGATTTTAGTTTTAGTGAATTGTATAAAGTT
AATACCTATAACGCTAACATTTGTCATGGAAAGTTTCATAATACTAAAGTTGTGAATTCTGACATGAGTGGTTCGTTCTT
TGATCATTCATTGTTTACCTCTGCAAAAATAGAAGATTCAGATCTTTCTAGAACTTCAATTTATAAGACAAAAATTAAAG
ACTCTCAAATTTATAATAGTACTCTTTCCCACCATAATATGGATTCGAGTGAGATAGAAAATTCAATATTCTTCAAATTA
TTAGCTGATAATTCGAGCTGGTCTAAGTCAAAAGTCACTAATTCAAACTTTATTGAAAGTGATTTCAAATCCTCCGTGTT
TTATGATAATGCCTTTAGAAAGACTAGTTTTTTTCTTAGCAATTTGAATAATTCAACAGTGAGTGATGTCTCTTTCCTCT
CTTCAAGCATATATAAAAGTTCAATTGCTGATATTCATTTAACAGATTGCAAATTTGATAATTCAATTATGATTGACAAT
CAGGGACAGAGCAAAATTACAGGTCTAGAGAGTGCTATAACTTCAATTAAAGATCTGCAAGAGAAAATATCGCAGGGTGA
AAAATTTGATGTAAATTATTCTTACTTTGAGTTTAAAGATATGAATTTAGAAAATGCTATTTTTTCTAATTCAATATTAA
GCAGAGCAAAGTTTGTAAACGTTAATTTGAATAAGGCAAATCTTGAAAAAGCCGATTTACGTTATACTGTCTTTGATAAT
TCCTCTCTTATTGATGCCAATTTATCAAATTCTAATTTAGAGGGCTCTAGTCTTTTAAACTTTGATTTAAAAAATACAAA
GTCTTAA

Upstream 100 bases:

>100_bases
GCTGAAATGATGCCATACCTTTTAGAGGATAAAGAAATAAACAATGAAGAAGACTCAGAGATGTATAACTTTGCTATAAA
AACAAAAGAAAGTACCTGCG

Downstream 100 bases:

>100_bases
AAAAGCTCTATAATGTACTTGTTAAATAAAGAAAAATGACCGTAAAAAATGAGGGCATACTACTGATTCTATCCTCTCCT
TCTGGAGCTGGAAAAACTAC

Product: pentapeptide repeat domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MQKIIRLLILILVGHLCYGDDAINDFLSALHDVKYISYNTKDFAKFLVQCNKASIPQDFKKGFGPNLNGANFSQLYLSKS
IFDGVSLIGADFSNTDLSDVSFIDVDLRGANFSNANLHGVKIKGTNLSFSKFASTNLTDIIFDQSNISYADFINSNLNKV
SMRNIIGLHTKFLNVKMNFSNLSNSSASYINFSDSEINDTVMQKNNFDNASFFGVDAHKLKVQFSSLKNANIYGAEIKKS
DFTGSNLSNAYFNSSIIVNSNFEKANLSNSQISYVKGDNSNFIKSILNGSKIKHAYVFEADLQDADLSNIDFSFSELYKV
NTYNANICHGKFHNTKVVNSDMSGSFFDHSLFTSAKIEDSDLSRTSIYKTKIKDSQIYNSTLSHHNMDSSEIENSIFFKL
LADNSSWSKSKVTNSNFIESDFKSSVFYDNAFRKTSFFLSNLNNSTVSDVSFLSSSIYKSSIADIHLTDCKFDNSIMIDN
QGQSKITGLESAITSIKDLQEKISQGEKFDVNYSYFEFKDMNLENAIFSNSILSRAKFVNVNLNKANLEKADLRYTVFDN
SSLIDANLSNSNLEGSSLLNFDLKNTKS

Sequences:

>Translated_588_residues
MQKIIRLLILILVGHLCYGDDAINDFLSALHDVKYISYNTKDFAKFLVQCNKASIPQDFKKGFGPNLNGANFSQLYLSKS
IFDGVSLIGADFSNTDLSDVSFIDVDLRGANFSNANLHGVKIKGTNLSFSKFASTNLTDIIFDQSNISYADFINSNLNKV
SMRNIIGLHTKFLNVKMNFSNLSNSSASYINFSDSEINDTVMQKNNFDNASFFGVDAHKLKVQFSSLKNANIYGAEIKKS
DFTGSNLSNAYFNSSIIVNSNFEKANLSNSQISYVKGDNSNFIKSILNGSKIKHAYVFEADLQDADLSNIDFSFSELYKV
NTYNANICHGKFHNTKVVNSDMSGSFFDHSLFTSAKIEDSDLSRTSIYKTKIKDSQIYNSTLSHHNMDSSEIENSIFFKL
LADNSSWSKSKVTNSNFIESDFKSSVFYDNAFRKTSFFLSNLNNSTVSDVSFLSSSIYKSSIADIHLTDCKFDNSIMIDN
QGQSKITGLESAITSIKDLQEKISQGEKFDVNYSYFEFKDMNLENAIFSNSILSRAKFVNVNLNKANLEKADLRYTVFDN
SSLIDANLSNSNLEGSSLLNFDLKNTKS
>Mature_588_residues
MQKIIRLLILILVGHLCYGDDAINDFLSALHDVKYISYNTKDFAKFLVQCNKASIPQDFKKGFGPNLNGANFSQLYLSKS
IFDGVSLIGADFSNTDLSDVSFIDVDLRGANFSNANLHGVKIKGTNLSFSKFASTNLTDIIFDQSNISYADFINSNLNKV
SMRNIIGLHTKFLNVKMNFSNLSNSSASYINFSDSEINDTVMQKNNFDNASFFGVDAHKLKVQFSSLKNANIYGAEIKKS
DFTGSNLSNAYFNSSIIVNSNFEKANLSNSQISYVKGDNSNFIKSILNGSKIKHAYVFEADLQDADLSNIDFSFSELYKV
NTYNANICHGKFHNTKVVNSDMSGSFFDHSLFTSAKIEDSDLSRTSIYKTKIKDSQIYNSTLSHHNMDSSEIENSIFFKL
LADNSSWSKSKVTNSNFIESDFKSSVFYDNAFRKTSFFLSNLNNSTVSDVSFLSSSIYKSSIADIHLTDCKFDNSIMIDN
QGQSKITGLESAITSIKDLQEKISQGEKFDVNYSYFEFKDMNLENAIFSNSILSRAKFVNVNLNKANLEKADLRYTVFDN
SSLIDANLSNSNLEGSSLLNFDLKNTKS

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 65721; Mature: 65721

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIIRLLILILVGHLCYGDDAINDFLSALHDVKYISYNTKDFAKFLVQCNKASIPQDFK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECHHHHHHHHHHCCCCCCCHHHH
KGFGPNLNGANFSQLYLSKSIFDGVSLIGADFSNTDLSDVSFIDVDLRGANFSNANLHGV
HCCCCCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE
KIKGTNLSFSKFASTNLTDIIFDQSNISYADFINSNLNKVSMRNIIGLHTKFLNVKMNFS
EEECCCCCHHHHCCCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHEEEEEEEEEEECC
NLSNSSASYINFSDSEINDTVMQKNNFDNASFFGVDAHKLKVQFSSLKNANIYGAEIKKS
CCCCCCCCEEECCCCCCCHHHHHCCCCCCCEEEECCHHEEEEEECCCCCCCEEECEEECC
DFTGSNLSNAYFNSSIIVNSNFEKANLSNSQISYVKGDNSNFIKSILNGSKIKHAYVFEA
CCCCCCCCCCEECCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEC
DLQDADLSNIDFSFSELYKVNTYNANICHGKFHNTKVVNSDMSGSFFDHSLFTSAKIEDS
CCCCCCCCCCCCCHHHEEEEECCCCEEEECCCCCCEEECCCCCCCCCCHHHHCCCCCCCC
DLSRTSIYKTKIKDSQIYNSTLSHHNMDSSEIENSIFFKLLADNSSWSKSKVTNSNFIES
CCCHHEEEEEECCCCHHHHHHHHHCCCCHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHH
DFKSSVFYDNAFRKTSFFLSNLNNSTVSDVSFLSSSIYKSSIADIHLTDCKFDNSIMIDN
HHHCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEC
QGQSKITGLESAITSIKDLQEKISQGEKFDVNYSYFEFKDMNLENAIFSNSILSRAKFVN
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCHHHHHHHHHHCCEEEEE
VNLNKANLEKADLRYTVFDNSSLIDANLSNSNLEGSSLLNFDLKNTKS
EECCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MQKIIRLLILILVGHLCYGDDAINDFLSALHDVKYISYNTKDFAKFLVQCNKASIPQDFK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECHHHHHHHHHHCCCCCCCHHHH
KGFGPNLNGANFSQLYLSKSIFDGVSLIGADFSNTDLSDVSFIDVDLRGANFSNANLHGV
HCCCCCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE
KIKGTNLSFSKFASTNLTDIIFDQSNISYADFINSNLNKVSMRNIIGLHTKFLNVKMNFS
EEECCCCCHHHHCCCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHEEEEEEEEEEECC
NLSNSSASYINFSDSEINDTVMQKNNFDNASFFGVDAHKLKVQFSSLKNANIYGAEIKKS
CCCCCCCCEEECCCCCCCHHHHHCCCCCCCEEEECCHHEEEEEECCCCCCCEEECEEECC
DFTGSNLSNAYFNSSIIVNSNFEKANLSNSQISYVKGDNSNFIKSILNGSKIKHAYVFEA
CCCCCCCCCCEECCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEC
DLQDADLSNIDFSFSELYKVNTYNANICHGKFHNTKVVNSDMSGSFFDHSLFTSAKIEDS
CCCCCCCCCCCCCHHHEEEEECCCCEEEECCCCCCEEECCCCCCCCCCHHHHCCCCCCCC
DLSRTSIYKTKIKDSQIYNSTLSHHNMDSSEIENSIFFKLLADNSSWSKSKVTNSNFIES
CCCHHEEEEEECCCCHHHHHHHHHCCCCHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHH
DFKSSVFYDNAFRKTSFFLSNLNNSTVSDVSFLSSSIYKSSIADIHLTDCKFDNSIMIDN
HHHCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEC
QGQSKITGLESAITSIKDLQEKISQGEKFDVNYSYFEFKDMNLENAIFSNSILSRAKFVN
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCCHHHHHHHHHHCCEEEEE
VNLNKANLEKADLRYTVFDNSSLIDANLSNSNLEGSSLLNFDLKNTKS
EECCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]