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The map label for this gene is ldcA [C]

Identifier: 190571058

GI number: 190571058

Start: 714947

End: 715906

Strand: Direct

Name: ldcA [C]

Synonym: WPa_0651

Alternate gene names: 190571058

Gene position: 714947-715906 (Clockwise)

Preceding gene: 190571057

Following gene: 190571065

Centisome position: 48.23

GC content: 32.81

Gene sequence:

>960_bases
ATGTATTCCTTTATTCTTTATTTTCTATGCCTTTTACTCACTAATCCTGCAAATCAAGTTGATATTATTGCTCCTTCTTC
GAAAGGAAAAGAATCAGATCTGCCTACTATAAGAGAATACGTAAAAACTTTGGGTTTTAATCCTCACATTTCGGAGAAAA
TATACAGTAATGACAACCCATTTTATTCTAACTCCGATGAGTTTAGAGCGAATGATTTGGTTAATGCGCTCACTGATGAT
AGCAAAATAATTTGGTGTATCAGAGGAGGAGAAGGGGCTTCTCGGCTAATTCCTTACCTAGAAAAGCTGCCCAATGATAA
AAAAGAAAGAATTGCTCAAAACAAAAAAATTCTCATAGGCTATAGTGATATCACTGCTTTACATATTTATCTACAAGTTA
AATATGATTGGCAAACTCTTCACGGCACCATGTTGGAAATGATAGTAAATAACTCTGTTGCTGAAAGCTCTGTTGAAAAA
TTAAAAGAATTAATTCTTAACCAACACAACTCTATCAGATTTGACAACTTAAAGATGATAAATAATGGAGTTAAACTAAA
AAATGGCAAATTAGAGTCTAAAATCATCGGTGGTAATATGACTTTGGTTGAAAATAGCATAGGAACTGCTTGGCAAATAA
ACGCAAAAAACAAAATTCTATTTTTAGAAGACATAAAAGTTTATCCATATTCAATTGAGCGAAGTCTAGATCACCTAAAA
CAAGCTCATATTTTTGATGGAGTAGATGCAGTAATATTCGGTGACTTTGTTAACTGTTATAATGATAATCTTGTTGAAAT
TGTAAAAGAAAGGTTTGCAAAAAGTGTTAACTTTCCAGTATTTACAATAAAAGGGGTAGGACATGGACATAGAAATGACC
CTTTACCTCTCAACACTCACACTATCATCAGCATGCAAGACGAGAAAGAGTTTATGGATGTGCAACAGTTATACAAGTAG

Upstream 100 bases:

>100_bases
TAAAAGATTACGGCGTTACATCAATGGAAAAACTAGGAGTAAAAGTTTCTCTTTGCGAATTAGATGATATATTAAAGCAA
GAGTTTCATAAGATATTTTA

Downstream 100 bases:

>100_bases
CTTTATCTCACACTCCTTTCATTCCAGCACCTTCGTTGTCATCCTAGTATCCCCCCTTGTCATCCCAGTTCCTAGACACT
GGGATCCAGATCAAGTACGG

Product: Peptidase S66 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MYSFILYFLCLLLTNPANQVDIIAPSSKGKESDLPTIREYVKTLGFNPHISEKIYSNDNPFYSNSDEFRANDLVNALTDD
SKIIWCIRGGEGASRLIPYLEKLPNDKKERIAQNKKILIGYSDITALHIYLQVKYDWQTLHGTMLEMIVNNSVAESSVEK
LKELILNQHNSIRFDNLKMINNGVKLKNGKLESKIIGGNMTLVENSIGTAWQINAKNKILFLEDIKVYPYSIERSLDHLK
QAHIFDGVDAVIFGDFVNCYNDNLVEIVKERFAKSVNFPVFTIKGVGHGHRNDPLPLNTHTIISMQDEKEFMDVQQLYK

Sequences:

>Translated_319_residues
MYSFILYFLCLLLTNPANQVDIIAPSSKGKESDLPTIREYVKTLGFNPHISEKIYSNDNPFYSNSDEFRANDLVNALTDD
SKIIWCIRGGEGASRLIPYLEKLPNDKKERIAQNKKILIGYSDITALHIYLQVKYDWQTLHGTMLEMIVNNSVAESSVEK
LKELILNQHNSIRFDNLKMINNGVKLKNGKLESKIIGGNMTLVENSIGTAWQINAKNKILFLEDIKVYPYSIERSLDHLK
QAHIFDGVDAVIFGDFVNCYNDNLVEIVKERFAKSVNFPVFTIKGVGHGHRNDPLPLNTHTIISMQDEKEFMDVQQLYK
>Mature_319_residues
MYSFILYFLCLLLTNPANQVDIIAPSSKGKESDLPTIREYVKTLGFNPHISEKIYSNDNPFYSNSDEFRANDLVNALTDD
SKIIWCIRGGEGASRLIPYLEKLPNDKKERIAQNKKILIGYSDITALHIYLQVKYDWQTLHGTMLEMIVNNSVAESSVEK
LKELILNQHNSIRFDNLKMINNGVKLKNGKLESKIIGGNMTLVENSIGTAWQINAKNKILFLEDIKVYPYSIERSLDHLK
QAHIFDGVDAVIFGDFVNCYNDNLVEIVKERFAKSVNFPVFTIKGVGHGHRNDPLPLNTHTIISMQDEKEFMDVQQLYK

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=260, Percent_Identity=27.3076923076923, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 36448; Mature: 36448

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSFILYFLCLLLTNPANQVDIIAPSSKGKESDLPTIREYVKTLGFNPHISEKIYSNDNP
CHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCC
FYSNSDEFRANDLVNALTDDSKIIWCIRGGEGASRLIPYLEKLPNDKKERIAQNKKILIG
CCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEE
YSDITALHIYLQVKYDWQTLHGTMLEMIVNNSVAESSVEKLKELILNQHNSIRFDNLKMI
ECCEEEEEEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCEEEE
NNGVKLKNGKLESKIIGGNMTLVENSIGTAWQINAKNKILFLEDIKVYPYSIERSLDHLK
CCCEEEECCCCCEEEECCCEEEEECCCCCEEEECCCCEEEEEECCEECCCHHHHHHHHHH
QAHIFDGVDAVIFGDFVNCYNDNLVEIVKERFAKSVNFPVFTIKGVGHGHRNDPLPLNTH
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCE
TIISMQDEKEFMDVQQLYK
EEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MYSFILYFLCLLLTNPANQVDIIAPSSKGKESDLPTIREYVKTLGFNPHISEKIYSNDNP
CHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCC
FYSNSDEFRANDLVNALTDDSKIIWCIRGGEGASRLIPYLEKLPNDKKERIAQNKKILIG
CCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCEEEEE
YSDITALHIYLQVKYDWQTLHGTMLEMIVNNSVAESSVEKLKELILNQHNSIRFDNLKMI
ECCEEEEEEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCEEEE
NNGVKLKNGKLESKIIGGNMTLVENSIGTAWQINAKNKILFLEDIKVYPYSIERSLDHLK
CCCEEEECCCCCEEEECCCEEEEECCCCCEEEECCCCEEEEEECCEECCCHHHHHHHHHH
QAHIFDGVDAVIFGDFVNCYNDNLVEIVKERFAKSVNFPVFTIKGVGHGHRNDPLPLNTH
HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCE
TIISMQDEKEFMDVQQLYK
EEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]