Click here to switch to the map view.

The map label for this gene is 190570589

Identifier: 190570589

GI number: 190570589

Start: 133070

End: 133672

Strand: Reverse

Name: 190570589

Synonym: WPa_0127

Alternate gene names: NA

Gene position: 133672-133070 (Counterclockwise)

Preceding gene: 190570592

Following gene: 190570588

Centisome position: 9.02

GC content: 34.33

Gene sequence:

>603_bases
ATGTTACACAAGTTTTTTAATCGTTCATTTGCCATTCTTTCTTCTATAAATGCTATTCAAAGGATAAAGAAAGATGAAAA
TGGAATATGTTACGTAACGGGACTTAGACGCTATTTGTCAGTGCTGCTTGATTTAATCATCATCGTTTTATTTTTACAGT
TTTGCGGTCAGGCCTTAAATCAACTCTTTATGAGCTCGGAGAGCAGTAAAATATTAGGCCAAATTGCTGCAAAATATCAA
ATGCAGGTGCCACTATCTGCAGAGGAAACAGCAATGCAGAGTAAACTAATAAAGTTACTAGTTCTAAATCAGATAGTTCA
ATTTATTATGCTTTTTAGTTATGTAGCATATATGTGGATAAGATTTGGCGCTACACCTGGAAAATTCTTACTTGGACTTA
GAGTTGTGAATGCACAAACTTTTGAAAAATTGACTCTGAAACAAGCAACAAAGAGGTTTTTTTCCTTCATATTGTCAACT
GCACCATTATTCTTGGGTTTCATATGGGCAAGTTTCGATAAACGCTGCCAAACTTGGCACGATAAGATTGCAAATACAGC
AGTTGTCACAAACAAAAGTCTTAAGTGTGATAAAATGAACTAA

Upstream 100 bases:

>100_bases
TGTGGTGGAATGGTAGACACGGCAGACTCAAAATCTGTTGCTTGCAAGAGCATGCTGGTTCAAGTCCGGCCAGGGGCACT
CAAACATTGGAAAGTGCTTT

Downstream 100 bases:

>100_bases
ATTCGTTTAAAATAAGAAAATTTTAATAGTTTTATTGATAAATTTGATCAAATGCTTAATTAATGATATACTAAAATAGT
AGGTAAAAAATATGCCAAGT

Product: Putative membrane RDD family protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Domain-Containing Protein; Membrane RDD Family Protein; Branched-Chain Amino Acid Aminotransferase I

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLHKFFNRSFAILSSINAIQRIKKDENGICYVTGLRRYLSVLLDLIIIVLFLQFCGQALNQLFMSSESSKILGQIAAKYQ
MQVPLSAEETAMQSKLIKLLVLNQIVQFIMLFSYVAYMWIRFGATPGKFLLGLRVVNAQTFEKLTLKQATKRFFSFILST
APLFLGFIWASFDKRCQTWHDKIANTAVVTNKSLKCDKMN

Sequences:

>Translated_200_residues
MLHKFFNRSFAILSSINAIQRIKKDENGICYVTGLRRYLSVLLDLIIIVLFLQFCGQALNQLFMSSESSKILGQIAAKYQ
MQVPLSAEETAMQSKLIKLLVLNQIVQFIMLFSYVAYMWIRFGATPGKFLLGLRVVNAQTFEKLTLKQATKRFFSFILST
APLFLGFIWASFDKRCQTWHDKIANTAVVTNKSLKCDKMN
>Mature_200_residues
MLHKFFNRSFAILSSINAIQRIKKDENGICYVTGLRRYLSVLLDLIIIVLFLQFCGQALNQLFMSSESSKILGQIAAKYQ
MQVPLSAEETAMQSKLIKLLVLNQIVQFIMLFSYVAYMWIRFGATPGKFLLGLRVVNAQTFEKLTLKQATKRFFSFILST
APLFLGFIWASFDKRCQTWHDKIANTAVVTNKSLKCDKMN

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22915; Mature: 22915

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHKFFNRSFAILSSINAIQRIKKDENGICYVTGLRRYLSVLLDLIIIVLFLQFCGQALN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLFMSSESSKILGQIAAKYQMQVPLSAEETAMQSKLIKLLVLNQIVQFIMLFSYVAYMWI
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGATPGKFLLGLRVVNAQTFEKLTLKQATKRFFSFILSTAPLFLGFIWASFDKRCQTWH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKIANTAVVTNKSLKCDKMN
HHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MLHKFFNRSFAILSSINAIQRIKKDENGICYVTGLRRYLSVLLDLIIIVLFLQFCGQALN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLFMSSESSKILGQIAAKYQMQVPLSAEETAMQSKLIKLLVLNQIVQFIMLFSYVAYMWI
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGATPGKFLLGLRVVNAQTFEKLTLKQATKRFFSFILSTAPLFLGFIWASFDKRCQTWH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKIANTAVVTNKSLKCDKMN
HHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA