Click here to switch to the map view.

The map label for this gene is 190570592

Identifier: 190570592

GI number: 190570592

Start: 137172

End: 137822

Strand: Reverse

Name: 190570592

Synonym: WPa_0130

Alternate gene names: NA

Gene position: 137822-137172 (Counterclockwise)

Preceding gene: 190570593

Following gene: 190570589

Centisome position: 9.3

GC content: 31.34

Gene sequence:

>651_bases
ATGGAAGTTGAATCAGTAAAAAACAAAAGTTATTTCAGGAAAGCAGTAGAATGGTATTGCCACAGATACCTGTTCTGCGT
TGTAGAAAGATCTTGGATGGCGTTAATAACGTTACTTCTCTTAGTATGTTTATTTTTATCATTACTAAACATATACCTAT
TACTTCCTGTTAAAAAAGATTTAAATTTTGTGAAGTACACGAACCACACAGAAGATGAGTTTTCTACAATACATAAACTT
AGTTTTAGTAAAAAAGAAGATGAATACACTTCCATAGCAAGGTACTTGGTAAGTCAATACGTCGAAGCATACGAGTCCTC
TCAGATCGTTGAATCAAAGTATCAAGAAAATTTTATAAAAAACAATTCTATATATAAAATCTATCAAGACTTTCAGGAAA
AAGTAAACAATGAAGCTGTTTCATCCACAAAAAAAATTACCAACATAAACGTAACAACACTATCTATTGACCGATCGATC
AAGGACTTAGTTAAATTTGCTGGAAATGCCACTGTACTTTTTGCAGCTGAGCAAAATAAGAAAATGAAAGACTATGCTGT
GGAGGTTAGCTTTACTTTATCAAACATGAAAGCAACTCTAACTGGTATAATACCATTTAAATTTATTGTTAACGGCTATA
AATACAGCTGA

Upstream 100 bases:

>100_bases
AATTTCATCTTATTGCAGAACAAGGTGATATAATCATTCATACTATTTTGGAAAATTTAGACATATTTTAAAGTTTTTTT
AGAGTTATTATAATTAGGTT

Downstream 100 bases:

>100_bases
TTACATTTAAAAAATTACTTGGTAGCTAAAAAAATAACTAAAGTGCATACAGCAGTAACAACTGGAGGTAAAATTAGAAG
CATTGGTGTCTTTTTAATAA

Product: Putative type IV secretion system protein VirB8

Products: NA

Alternate protein names: Type IV Secretion System ; VirB8 Protein

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MEVESVKNKSYFRKAVEWYCHRYLFCVVERSWMALITLLLLVCLFLSLLNIYLLLPVKKDLNFVKYTNHTEDEFSTIHKL
SFSKKEDEYTSIARYLVSQYVEAYESSQIVESKYQENFIKNNSIYKIYQDFQEKVNNEAVSSTKKITNINVTTLSIDRSI
KDLVKFAGNATVLFAAEQNKKMKDYAVEVSFTLSNMKATLTGIIPFKFIVNGYKYS

Sequences:

>Translated_216_residues
MEVESVKNKSYFRKAVEWYCHRYLFCVVERSWMALITLLLLVCLFLSLLNIYLLLPVKKDLNFVKYTNHTEDEFSTIHKL
SFSKKEDEYTSIARYLVSQYVEAYESSQIVESKYQENFIKNNSIYKIYQDFQEKVNNEAVSSTKKITNINVTTLSIDRSI
KDLVKFAGNATVLFAAEQNKKMKDYAVEVSFTLSNMKATLTGIIPFKFIVNGYKYS
>Mature_216_residues
MEVESVKNKSYFRKAVEWYCHRYLFCVVERSWMALITLLLLVCLFLSLLNIYLLLPVKKDLNFVKYTNHTEDEFSTIHKL
SFSKKEDEYTSIARYLVSQYVEAYESSQIVESKYQENFIKNNSIYKIYQDFQEKVNNEAVSSTKKITNINVTTLSIDRSI
KDLVKFAGNATVLFAAEQNKKMKDYAVEVSFTLSNMKATLTGIIPFKFIVNGYKYS

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25238; Mature: 25238

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVESVKNKSYFRKAVEWYCHRYLFCVVERSWMALITLLLLVCLFLSLLNIYLLLPVKKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
LNFVKYTNHTEDEFSTIHKLSFSKKEDEYTSIARYLVSQYVEAYESSQIVESKYQENFIK
CCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNSIYKIYQDFQEKVNNEAVSSTKKITNINVTTLSIDRSIKDLVKFAGNATVLFAAEQNK
CCCHHHHHHHHHHHHCHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHCCCCEEEEEECCCC
KMKDYAVEVSFTLSNMKATLTGIIPFKFIVNGYKYS
CCHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEVESVKNKSYFRKAVEWYCHRYLFCVVERSWMALITLLLLVCLFLSLLNIYLLLPVKKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
LNFVKYTNHTEDEFSTIHKLSFSKKEDEYTSIARYLVSQYVEAYESSQIVESKYQENFIK
CCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNSIYKIYQDFQEKVNNEAVSSTKKITNINVTTLSIDRSIKDLVKFAGNATVLFAAEQNK
CCCHHHHHHHHHHHHCHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHCCCCEEEEEECCCC
KMKDYAVEVSFTLSNMKATLTGIIPFKFIVNGYKYS
CCHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA