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The map label for this gene is coxB [H]

Identifier: 190570553

GI number: 190570553

Start: 79738

End: 80502

Strand: Reverse

Name: coxB [H]

Synonym: WPa_0083

Alternate gene names: 190570553

Gene position: 80502-79738 (Counterclockwise)

Preceding gene: 190570554

Following gene: 190570552

Centisome position: 5.43

GC content: 33.59

Gene sequence:

>765_bases
ATGGTGAAGTTACTTGCATTATTGATAATGTTTTACTCAAATATATCAATTGCTTCTGCTCCTACTTCTTGGCAATTTGG
ATTTCCTGCGCCTGCAACTGAGATAATGGAGGTTGTAGTTAAGTCACATTCGTTTGTGATGAGTGTAATGATTGCAATTA
TGCTTTTTGTATGGGCCCTGCTTGCTTATGTAGTATTTCGCTTTCGTAAGGGCAAAGTGAAAAATGTCAGTAAAATAACT
CATAATATCTTTGTAGAAATTATCTGGTTTGTTATACCAACGATTATTGTTGGGGTATTGGCTTTTAAAAATGCTGAATT
AATTAAACTACAGGAGAAAGTGCCAAAAGCTGACATAACACTAAAAGTTATTGGTCATCAATGGTATTGGAGTTACAAGT
ACCCAGAATATCAAGGTATTTCATTTGACAGCTATATAAAAGGAAAAGAAGACCTTACCGAAAGAGATTTAAAACTATTC
TCTGTTGATAATAACGTTATTTTACCTATCAATACTAATATTCGTTTACAAGTGACAGCAGGAGATGTAATACATAGCTG
GGGAATACCTGCTTTTGGTATAAAAATTGATGCAATACCAGGTAGGCTGAATGAAGCATGGTTTAACGTTACAAAGCCCG
GTATTTATTATGGGCAATGTTATGAACTATGTGGTCAAGGTCATGGATTTATGCCAATTGTTGTTGAAGCAGTGAGTAAA
GAAGATTTTAATAAGTGGATTGAAGATAAAAAATTAGTAAGTTAA

Upstream 100 bases:

>100_bases
TGACTCAATATTTAGCAAAACACTTGTGTAAATTCTATAATCTCTGTTTGCATAGTAAGTGTATATATATTATTATACAG
TTAGTTTTACAGCAAAAAAT

Downstream 100 bases:

>100_bases
GTTTGGAGTATAGATATGAGTGATGTACCAAAAGGTATAAGACGTTGGCTGCTTTCTACTAATCACAAAGATATAGGGAC
ACTATACATTATTTTTTCCA

Product: cytochrome c oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MVKLLALLIMFYSNISIASAPTSWQFGFPAPATEIMEVVVKSHSFVMSVMIAIMLFVWALLAYVVFRFRKGKVKNVSKIT
HNIFVEIIWFVIPTIIVGVLAFKNAELIKLQEKVPKADITLKVIGHQWYWSYKYPEYQGISFDSYIKGKEDLTERDLKLF
SVDNNVILPINTNIRLQVTAGDVIHSWGIPAFGIKIDAIPGRLNEAWFNVTKPGIYYGQCYELCGQGHGFMPIVVEAVSK
EDFNKWIEDKKLVS

Sequences:

>Translated_254_residues
MVKLLALLIMFYSNISIASAPTSWQFGFPAPATEIMEVVVKSHSFVMSVMIAIMLFVWALLAYVVFRFRKGKVKNVSKIT
HNIFVEIIWFVIPTIIVGVLAFKNAELIKLQEKVPKADITLKVIGHQWYWSYKYPEYQGISFDSYIKGKEDLTERDLKLF
SVDNNVILPINTNIRLQVTAGDVIHSWGIPAFGIKIDAIPGRLNEAWFNVTKPGIYYGQCYELCGQGHGFMPIVVEAVSK
EDFNKWIEDKKLVS
>Mature_254_residues
MVKLLALLIMFYSNISIASAPTSWQFGFPAPATEIMEVVVKSHSFVMSVMIAIMLFVWALLAYVVFRFRKGKVKNVSKIT
HNIFVEIIWFVIPTIIVGVLAFKNAELIKLQEKVPKADITLKVIGHQWYWSYKYPEYQGISFDSYIKGKEDLTERDLKLF
SVDNNVILPINTNIRLQVTAGDVIHSWGIPAFGIKIDAIPGRLNEAWFNVTKPGIYYGQCYELCGQGHGFMPIVVEAVSK
EDFNKWIEDKKLVS

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=221, Percent_Identity=37.5565610859729, Blast_Score=179, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6226540, Length=252, Percent_Identity=35.3174603174603, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 28930; Mature: 28930

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLLALLIMFYSNISIASAPTSWQFGFPAPATEIMEVVVKSHSFVMSVMIAIMLFVWAL
CHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYVVFRFRKGKVKNVSKITHNIFVEIIWFVIPTIIVGVLAFKNAELIKLQEKVPKADIT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE
LKVIGHQWYWSYKYPEYQGISFDSYIKGKEDLTERDLKLFSVDNNVILPINTNIRLQVTA
EEEEECEEEEEECCCCCCCCCHHHHCCCCHHHHHHCEEEEEECCCEEEEECCCEEEEEEE
GDVIHSWGIPAFGIKIDAIPGRLNEAWFNVTKPGIYYGQCYELCGQGHGFMPIVVEAVSK
CCHHHHCCCCEECEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
EDFNKWIEDKKLVS
HHHHHHHHHHHCCC
>Mature Secondary Structure
MVKLLALLIMFYSNISIASAPTSWQFGFPAPATEIMEVVVKSHSFVMSVMIAIMLFVWAL
CHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYVVFRFRKGKVKNVSKITHNIFVEIIWFVIPTIIVGVLAFKNAELIKLQEKVPKADIT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE
LKVIGHQWYWSYKYPEYQGISFDSYIKGKEDLTERDLKLFSVDNNVILPINTNIRLQVTA
EEEEECEEEEEECCCCCCCCCHHHHCCCCHHHHHHCEEEEEECCCEEEEECCCEEEEEEE
GDVIHSWGIPAFGIKIDAIPGRLNEAWFNVTKPGIYYGQCYELCGQGHGFMPIVVEAVSK
CCHHHHCCCCEECEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
EDFNKWIEDKKLVS
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA