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The map label for this gene is 190570546

Identifier: 190570546

GI number: 190570546

Start: 71288

End: 71944

Strand: Direct

Name: 190570546

Synonym: WPa_0076

Alternate gene names: NA

Gene position: 71288-71944 (Clockwise)

Preceding gene: 190570545

Following gene: 190570547

Centisome position: 4.81

GC content: 33.49

Gene sequence:

>657_bases
GTGGAAAAAAGTGTGAAATTGACTGAAGATAAAAAATTGGCCTCTGATATTCTAAAAGAGGTTGCAGATACTAATAATAA
CGATAATGATAAAGTAACATTATTTGATATTAAAACAGCTTTACATGAGCGTGGTTTTGGTATTTTAATAATCATCTTCT
CTTTACCGCTATCAGTACCTATACCTGTTCCACCTGGCTATACAACCATTCTTTCTATACCTTTAATCTTATTTTCACTG
CAGCTTCTATTTGGGTTTGATTCTCCTTGGATGCCTAATTGGCTAGAAAGGAAATCTTTTCAACGTTCAACACTAGCTCT
CGTGGTAGAGAAAACTTCACCTACATTAAAAAAAATAGAAAAGTTCATGAAACCAAGAATGTCTTTCATTTTTCGTGGTC
CTGGTGAAAATATTTTAGCATTTATAATGCTGCTTTGTGCATTATCGATAGCAATCCCACTTCCTTTAACTAACTTCATT
CCTGCAATTGGTACAACTCTCATTTCACTGGGTATCATGAGCAAAGATGGATTTCTCTCTATAATGGGAGTATTAGTATC
ATTGTGTGGGTTATTACTTACTCTTGTCGTAATAGTTAAAGGACCACAGCTTATATTTGGAGCATTTTCTTTTCTAAAAA
GCTTTGTATATGGTTAA

Upstream 100 bases:

>100_bases
TTTAATAAAAGAATGAAGTACAGCATGAAATGAATAATCGATATTGAAATATAGCAATAACTATGTTAGTTAGAAGTTAT
ATTGTTATTAAAGGGTAACT

Downstream 100 bases:

>100_bases
GCTTTACAACACTTTAACAAAAAAAAAAGAGCCCTTTACACCGATCGATAAAGATCATATAAAAATGTACGTTTGTGGGC
CAACAGTATATGATACAGCA

Product: exopolysaccharide synthesis protein ExoD-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MEKSVKLTEDKKLASDILKEVADTNNNDNDKVTLFDIKTALHERGFGILIIIFSLPLSVPIPVPPGYTTILSIPLILFSL
QLLFGFDSPWMPNWLERKSFQRSTLALVVEKTSPTLKKIEKFMKPRMSFIFRGPGENILAFIMLLCALSIAIPLPLTNFI
PAIGTTLISLGIMSKDGFLSIMGVLVSLCGLLLTLVVIVKGPQLIFGAFSFLKSFVYG

Sequences:

>Translated_218_residues
MEKSVKLTEDKKLASDILKEVADTNNNDNDKVTLFDIKTALHERGFGILIIIFSLPLSVPIPVPPGYTTILSIPLILFSL
QLLFGFDSPWMPNWLERKSFQRSTLALVVEKTSPTLKKIEKFMKPRMSFIFRGPGENILAFIMLLCALSIAIPLPLTNFI
PAIGTTLISLGIMSKDGFLSIMGVLVSLCGLLLTLVVIVKGPQLIFGAFSFLKSFVYG
>Mature_218_residues
MEKSVKLTEDKKLASDILKEVADTNNNDNDKVTLFDIKTALHERGFGILIIIFSLPLSVPIPVPPGYTTILSIPLILFSL
QLLFGFDSPWMPNWLERKSFQRSTLALVVEKTSPTLKKIEKFMKPRMSFIFRGPGENILAFIMLLCALSIAIPLPLTNFI
PAIGTTLISLGIMSKDGFLSIMGVLVSLCGLLLTLVVIVKGPQLIFGAFSFLKSFVYG

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 24078; Mature: 24078

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSVKLTEDKKLASDILKEVADTNNNDNDKVTLFDIKTALHERGFGILIIIFSLPLSVP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCEEEEHEECCCCCCC
IPVPPGYTTILSIPLILFSLQLLFGFDSPWMPNWLERKSFQRSTLALVVEKTSPTLKKIE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHH
KFMKPRMSFIFRGPGENILAFIMLLCALSIAIPLPLTNFIPAIGTTLISLGIMSKDGFLS
HHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
IMGVLVSLCGLLLTLVVIVKGPQLIFGAFSFLKSFVYG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKSVKLTEDKKLASDILKEVADTNNNDNDKVTLFDIKTALHERGFGILIIIFSLPLSVP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCEEEEHEECCCCCCC
IPVPPGYTTILSIPLILFSLQLLFGFDSPWMPNWLERKSFQRSTLALVVEKTSPTLKKIE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHH
KFMKPRMSFIFRGPGENILAFIMLLCALSIAIPLPLTNFIPAIGTTLISLGIMSKDGFLS
HHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
IMGVLVSLCGLLLTLVVIVKGPQLIFGAFSFLKSFVYG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]