| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is mnmG [H]
Identifier: 189499008
GI number: 189499008
Start: 9486
End: 11357
Strand: Reverse
Name: mnmG [H]
Synonym: Cphamn1_0008
Alternate gene names: 189499008
Gene position: 11357-9486 (Counterclockwise)
Preceding gene: 189499015
Following gene: 189499007
Centisome position: 0.42
GC content: 48.99
Gene sequence:
>1872_bases ATGAACATCTACGACCTAATAGTGGCAGGAGCAGGCCATGCAGGCTGTGAGGCGGCACTTGCCGGGGCCCGAATGGGCCT GAAGTGCCTGCTCATCACCTCTGATTTTTCTGCAATCGCCAGAATGTCCTGCAATCCGGCTATCGGCGGCGTTGCAAAAG GCCAGATAACAAGAGAAATCGATGCTCTCGGCGGCGAAATGGGAAAAGCAATCGATGCGACCGGAATTCAGTTCAGAATG CTCAACAGAAGCAAAGGACCCGCAATGCACTCCCCGAGAGCCCAGGCCGACCGAACGAACTACTCGGCCTACATGCGAAA AATCATAGAACAGGAAACAAATATTGATCTGCTCCAGGACAGCGTTATCAGAATCGCGACAAATCAGGGCACCTGCAACG GCGCCATAGTCAGCTCCGGGCGCACCATAGAAGCAAAAGCCGTCATCCTCTCCTGCGGAACGTTTCTCAACGGCCTGATT CATATTGGAATGAATCATTACCCCGGAGGAAGAACCATTGCAGAGCCGCCAGTCCAAGGCCTTACGGAATCCCTTGCCTC ACTTGGCTTTGAGCACGGGCGCCTGAAAACAGGTACACCCCCGAGAATAGATCAAAGAAGTGTTGATTATGCCAGGGTTT CTGTTCAGCCGGGTGACAGGGACCCCTCGCCCTTTTCATTCTCCACAGAGAGCCTTGCCGGCAGGAAGCAGGTCGAATGC TTTCTGACCGCCACAACCGAAAATACTCACCGCATTCTACAGGAGGGTTTCGAACGCTCACCGCTTTTCTCAGGAAAAGT ACAGGGCGTCGGCCCACGATACTGCCCTTCTATTGAAGATAAAATTCATCGTTTCAGAGAGAAAAACAGCCACCATATCT TTCTCGAACCTGAAGGGTTTGAAACAAACGAAATGTATGTAAACGGTTTTTCAACCTCCCTTCCTGAAGATATTCAACTC AAAGGACTGCGTTCTATTCCCGGACTGGAAAACGTCATCATGATGCGCCCGGGCTACGCCATTGAATACGATTATTTTTA TCCTTTTCAACTTCACCCCACACTTGAGACAAAGCGTATAAAAAACCTGTATTTTGCCGGACAGATAAACGGAACATCGG GTTATGAAGAGGCCGCTGCGCAGGGAATTATGGCGGGGATCAATGCCGCACTGAATATCCGGCAAAAAGAGCCCTTGATC CTTAAACGATCTGAAGCATATATCGGCGTACTGATCGATGACCTGATCACGAAAGAAACAAACGAACCGTACAGAATGTT TACCTCTTCCGCTGAACACCGCATCATACTCCGCCAGGATAATGCGGATTTACGTCTTATGCCTTTTGGTTACGCTTGCG GACTGCTTTCTGAAAATACCTATCGCAACCTCGAGATAAAACGACGAAACATCGCCTCTGTTAAGGAGCTTATTTCATCT ATAAGGGTGGCATCCGACTCCATCAATGCACTGCTGGCCGAACAAGGCTCCCCTTCGATATCCGGAAGCACGAGAATAGC AACGATACTGAAACGCCCCAAGATCACGCTTTCGTCACTAGTAAACGCTTTTCCGGAAGTAGCAGATCAAATATCCGAAG TCACACAGGACAATACAGTACTGGAACAGGTTGAAATCGATTGCAAGTACGAAGGATATATACAACGCGAGCGGCTTATG GCCGAAAAAATCGCGCGTCTTGATTCTCACAGGATCCCTGCATCGTTCAACTATAGTGCGCTCAAGGGTCTTTCAAATGA AGGAAAAGAAAAATTATCAAAAGTTAAGCCCTCGACAGTAGGGCAGGCGTCAAGAATACTGGGAGTTACACCTGCTGATA TCTCAGTCCTCATGGTGAAAATAGGCCGATAG
Upstream 100 bases:
>100_bases ACAAGTAGATCTCACGCCAGGGCAAAAAAAACCATAACTCTTTCTATTATAATATTTTAACCGGAACCACAAATCATGTT TCACGTGAAACACATTAGTA
Downstream 100 bases:
>100_bases AGCGACTTAACAGAGATGTTTCACGTGAAACGTTCAATTCTCACGTTCACGTCTAACGAGATACAAAACTGATATGAGTA ACAACCAACAGAACAACATC
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MNIYDLIVAGAGHAGCEAALAGARMGLKCLLITSDFSAIARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM LNRSKGPAMHSPRAQADRTNYSAYMRKIIEQETNIDLLQDSVIRIATNQGTCNGAIVSSGRTIEAKAVILSCGTFLNGLI HIGMNHYPGGRTIAEPPVQGLTESLASLGFEHGRLKTGTPPRIDQRSVDYARVSVQPGDRDPSPFSFSTESLAGRKQVEC FLTATTENTHRILQEGFERSPLFSGKVQGVGPRYCPSIEDKIHRFREKNSHHIFLEPEGFETNEMYVNGFSTSLPEDIQL KGLRSIPGLENVIMMRPGYAIEYDYFYPFQLHPTLETKRIKNLYFAGQINGTSGYEEAAAQGIMAGINAALNIRQKEPLI LKRSEAYIGVLIDDLITKETNEPYRMFTSSAEHRIILRQDNADLRLMPFGYACGLLSENTYRNLEIKRRNIASVKELISS IRVASDSINALLAEQGSPSISGSTRIATILKRPKITLSSLVNAFPEVADQISEVTQDNTVLEQVEIDCKYEGYIQRERLM AEKIARLDSHRIPASFNYSALKGLSNEGKEKLSKVKPSTVGQASRILGVTPADISVLMVKIGR
Sequences:
>Translated_623_residues MNIYDLIVAGAGHAGCEAALAGARMGLKCLLITSDFSAIARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM LNRSKGPAMHSPRAQADRTNYSAYMRKIIEQETNIDLLQDSVIRIATNQGTCNGAIVSSGRTIEAKAVILSCGTFLNGLI HIGMNHYPGGRTIAEPPVQGLTESLASLGFEHGRLKTGTPPRIDQRSVDYARVSVQPGDRDPSPFSFSTESLAGRKQVEC FLTATTENTHRILQEGFERSPLFSGKVQGVGPRYCPSIEDKIHRFREKNSHHIFLEPEGFETNEMYVNGFSTSLPEDIQL KGLRSIPGLENVIMMRPGYAIEYDYFYPFQLHPTLETKRIKNLYFAGQINGTSGYEEAAAQGIMAGINAALNIRQKEPLI LKRSEAYIGVLIDDLITKETNEPYRMFTSSAEHRIILRQDNADLRLMPFGYACGLLSENTYRNLEIKRRNIASVKELISS IRVASDSINALLAEQGSPSISGSTRIATILKRPKITLSSLVNAFPEVADQISEVTQDNTVLEQVEIDCKYEGYIQRERLM AEKIARLDSHRIPASFNYSALKGLSNEGKEKLSKVKPSTVGQASRILGVTPADISVLMVKIGR >Mature_623_residues MNIYDLIVAGAGHAGCEAALAGARMGLKCLLITSDFSAIARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM LNRSKGPAMHSPRAQADRTNYSAYMRKIIEQETNIDLLQDSVIRIATNQGTCNGAIVSSGRTIEAKAVILSCGTFLNGLI HIGMNHYPGGRTIAEPPVQGLTESLASLGFEHGRLKTGTPPRIDQRSVDYARVSVQPGDRDPSPFSFSTESLAGRKQVEC FLTATTENTHRILQEGFERSPLFSGKVQGVGPRYCPSIEDKIHRFREKNSHHIFLEPEGFETNEMYVNGFSTSLPEDIQL KGLRSIPGLENVIMMRPGYAIEYDYFYPFQLHPTLETKRIKNLYFAGQINGTSGYEEAAAQGIMAGINAALNIRQKEPLI LKRSEAYIGVLIDDLITKETNEPYRMFTSSAEHRIILRQDNADLRLMPFGYACGLLSENTYRNLEIKRRNIASVKELISS IRVASDSINALLAEQGSPSISGSTRIATILKRPKITLSSLVNAFPEVADQISEVTQDNTVLEQVEIDCKYEGYIQRERLM AEKIARLDSHRIPASFNYSALKGLSNEGKEKLSKVKPSTVGQASRILGVTPADISVLMVKIGR
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=629, Percent_Identity=39.7456279809221, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI19882217, Length=654, Percent_Identity=38.2262996941896, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI183227703, Length=669, Percent_Identity=37.3692077727952, Blast_Score=411, Evalue=1e-114, Organism=Escherichia coli, GI2367273, Length=626, Percent_Identity=48.5623003194888, Blast_Score=584, Evalue=1e-168, Organism=Caenorhabditis elegans, GI17534255, Length=618, Percent_Identity=36.8932038834951, Blast_Score=410, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6321202, Length=619, Percent_Identity=43.6187399030695, Blast_Score=492, Evalue=1e-140, Organism=Drosophila melanogaster, GI24658174, Length=625, Percent_Identity=40.8, Blast_Score=451, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 68440; Mature: 68440
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYDLIVAGAGHAGCEAALAGARMGLKCLLITSDFSAIARMSCNPAIGGVAKGQITREI CCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH DALGGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADRTNYSAYMRKIIEQETNIDLLQD HHHCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCC SVIRIATNQGTCNGAIVSSGRTIEAKAVILSCGTFLNGLIHIGMNHYPGGRTIAEPPVQG CEEEEEECCCCCCCEEEECCCEEEEEEEEEEHHHHHHHHHEECCCCCCCCCCCCCCCHHH LTESLASLGFEHGRLKTGTPPRIDQRSVDYARVSVQPGDRDPSPFSFSTESLAGRKQVEC HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCEEEE FLTATTENTHRILQEGFERSPLFSGKVQGVGPRYCPSIEDKIHRFREKNSHHIFLEPEGF EEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCC ETNEMYVNGFSTSLPEDIQLKGLRSIPGLENVIMMRPGYAIEYDYFYPFQLHPTLETKRI CCCCEEEECCCCCCCCCCEECCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCHHHHHH KNLYFAGQINGTSGYEEAAAQGIMAGINAALNIRQKEPLILKRSEAYIGVLIDDLITKET HEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEHHHHHHHHCCC NEPYRMFTSSAEHRIILRQDNADLRLMPFGYACGLLSENTYRNLEIKRRNIASVKELISS CCCHHHHCCCCCCEEEEEECCCCEEEEECHHECCCCCCCCCCCEEEEHHHHHHHHHHHHH IRVASDSINALLAEQGSPSISGSTRIATILKRPKITLSSLVNAFPEVADQISEVTQDNTV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCE LEQVEIDCKYEGYIQRERLMAEKIARLDSHRIPASFNYSALKGLSNEGKEKLSKVKPSTV EEHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCC GQASRILGVTPADISVLMVKIGR CCHHHEEECCCCCEEEEEEEECC >Mature Secondary Structure MNIYDLIVAGAGHAGCEAALAGARMGLKCLLITSDFSAIARMSCNPAIGGVAKGQITREI CCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH DALGGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADRTNYSAYMRKIIEQETNIDLLQD HHHCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCC SVIRIATNQGTCNGAIVSSGRTIEAKAVILSCGTFLNGLIHIGMNHYPGGRTIAEPPVQG CEEEEEECCCCCCCEEEECCCEEEEEEEEEEHHHHHHHHHEECCCCCCCCCCCCCCCHHH LTESLASLGFEHGRLKTGTPPRIDQRSVDYARVSVQPGDRDPSPFSFSTESLAGRKQVEC HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCEEEE FLTATTENTHRILQEGFERSPLFSGKVQGVGPRYCPSIEDKIHRFREKNSHHIFLEPEGF EEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCC ETNEMYVNGFSTSLPEDIQLKGLRSIPGLENVIMMRPGYAIEYDYFYPFQLHPTLETKRI CCCCEEEECCCCCCCCCCEECCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCHHHHHH KNLYFAGQINGTSGYEEAAAQGIMAGINAALNIRQKEPLILKRSEAYIGVLIDDLITKET HEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCEEEHHHHHHHHCCC NEPYRMFTSSAEHRIILRQDNADLRLMPFGYACGLLSENTYRNLEIKRRNIASVKELISS CCCHHHHCCCCCCEEEEEECCCCEEEEECHHECCCCCCCCCCCEEEEHHHHHHHHHHHHH IRVASDSINALLAEQGSPSISGSTRIATILKRPKITLSSLVNAFPEVADQISEVTQDNTV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCE LEQVEIDCKYEGYIQRERLMAEKIARLDSHRIPASFNYSALKGLSNEGKEKLSKVKPSTV EEHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCC GQASRILGVTPADISVLMVKIGR CCHHHEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA