| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is btuB [C]
Identifier: 189424538
GI number: 189424538
Start: 1541147
End: 1543153
Strand: Reverse
Name: btuB [C]
Synonym: Glov_1476
Alternate gene names: 189424538
Gene position: 1543153-1541147 (Counterclockwise)
Preceding gene: 189424539
Following gene: 189424537
Centisome position: 39.39
GC content: 57.7
Gene sequence:
>2007_bases ATGACCGTACAACAGCTTTCGCTGCTGGCGCTGCTGCTGACACTGACAGCCCAGACAGCCCGTGCCGAACATCTGCTGCT TGATGAAATCATTGTCCGCGCCGACAAGGAATCACCGAAGGAAGAGAGTCTTTCTGTCCGGGAAGTTCGTGAAAGTCCAG CCAGGGATATGGGTGAGGCCCTGAAACAGGTGGAAGGAATCAACATTGTCCACAAGGGGGCAATTGCCAATGATGTGGTG CTGCGCGGCTTTCAGAAGGACAATATCAACGTCCTGGTGGATGGCGTCCGCCTGCATGGCGCCTGCCCCTCCCGAATGGA CCCGCCGTCGTTCCACTATGATTTTGCCGAGATTGAGCAGGTCAGGATCATCAAGGGCCCCTATGATCTCTCCAACCCCG GTGGCCTGGGGGGTCTGATTGACGCCCAGACCAAACGGCCGGGCAAGGGATTTGGCGGTGAGCTCAGCCTGGGATACGGC GACTGGCACGGCACCAATGCTGCGGCCACCGCATCCTATGGCACAGAGCGCTATGATGCCCTGATGGGCTACGCCTACAA ATATTCCGATGTCCCCCAGTCCGGCAACGGCAAGCTGCTGACCCAGATCTATCCCGCAACCAGCCCGAACCGTTACAAGA ACACCGCCATTGACTCCAAGGCCTACGAGATCAACACCGGCTGGGGCAAGCTGGGGCTTAACCCGACTGCCAATTCACGC ACGGAGCTCAGCTATACCTATCAGGATGCGGACCATGTCCTCTACCCCTACCTGAAGATGGATGCCGACTACGACAGGAC CGACCGTATGAACTGGAGCTACCGGATTCAGAACCTCTCGGCACTGCTGCAGGATCTGAAGCTGCAGGTCTACTGGGACC GGGTTGAACACCTGATGGATGACCGCAGCCGCTTCAGCTCCAGCACATCACCACGGTTCTATTCCATGCAGACCGATGCC TCCACCCAGACCTATGGAGCAAAACTGCAGGCAGAGCTGAAGCTCGGACCGGGCAGTCTGAAGAGCGGGCTGGACTACTA CAACCGCAACTGGGATGCCACCAATCGCCGGGCCATGTATTTTAACTACCGCGACCTTGCCATGATCCCGGATGTGACGA TTGAAAACTTCGGCCTGTTCGGTGAGTATACCCTGCCGCTTGGCGGCAAACTAAGCCTGACCGGCGGCGTACGTGGCGAT CTGACCCGGGCCAAGGCAGACAGAGCCAACACCATGGTGACTGCCGGCAGTTCAAAGGAATTCAGCACCATCAGCGCAAA CCTGCAGCTGAACTACACCCCCTTCAAGGAACTGGTGATCTTCACCGGCCTGGGACGGGGCACCCGCACCCCCGACCAGC AGGAACTGTTTCTTGATCTGCCGGGGAACCCGGCCTGGCGCGGCAACCAGGGCCTCAAGGCAACCGTCAACCATCAGGCT GACCTTGGAGCCAAGTACGCAACGGATCGTTTTTATGTCAATGCCTCGATCTTTTACAGCGACCTGCAGGATTACGTGAA CTTCTACCAGGCCTCCGCTACCCTGAAGAGCTATCAGAATATCCATGCCAGCATCTGGGGTGCCGAACTGGGTAGCCAGG TTTCATTGCCGGCCGACCTGTTTCTGAGGGGCACCCTTTCCTACACCGAAGGGCGAAATATCAGCGGCAATCGCCCGCTG TCCGAGATGCCGCCCCTGAAAGGCACCATCTCCATCCGCTATGACAACGGCAGCTTCTTTGCCGAACTGCTTGAGACCCT CAGCCGCGAACAGGATCGCATTGACAGCAGCCTGAACGAACAAAAGACTGCCGGGTGGGTAACCACTGACCTGAAGGCAG GCTATCAGTACAAAGGGTTCTCCGTGACCGGCGGCATCAACAACATTCTGGACACCCAGTACTACAGCCACCTGTCTTAT CTGCGTGACCCCTTTGTCAGCGGTGTCGGCTACCGCGTTCCGGAAAACGGACGGAACGTCTACCTGACCATGGCCTATAA ATTCTAG
Upstream 100 bases:
>100_bases GGCCGTTGCTCCCCCCTCCAAAGCCTGTCTGATCCAGACAATCAGCGCCGTAATCGACATTTGATCCTTACGACTGACAA CGCTATGGAGGACTACTGCC
Downstream 100 bases:
>100_bases TGGGCTGCAATGGACAGCAGGCAAAAACCGCGTTACACATATTCCAGACAGGAGAACAGACAATGAAAAACCTACTGAAG TTTCTGGCTACCCTGACCCT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor OprC; Heme Receptor; Outer Membrane Protein C; Outer Membrane Hemin Receptor; NB-Dependent Receptor Domain Protein; Outer-Membrane Heme Receptor; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer-Membrane Uptake Protein; Outer Membrane Receptor Protein; Outer Membrane Protein NosA; NB-Dependent Haemoglobin/Transferrin/Lactoferrin Receptor; Haem/Haemoglobin Uptake Outer Membrane Receptor PhuR; NB-Dependent Outer Membrane Heme Receptor; NB-Dependent Outer Membrane Hemin Receptor; Outer Membrane Protein OprC Complement; Iron Complex Outermembrane Recepter Protein; Outer Membrane Heme Receptor; NB System Receptor; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Heme Transport Protein HutA; NB-Dependent Heme And Hemoglobin Receptor HutA; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; Outer Membrane Receptor Proteins; Nb-Dependent Receptor Plug; Outer Membrane Protein OprC
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MTVQQLSLLALLLTLTAQTARAEHLLLDEIIVRADKESPKEESLSVREVRESPARDMGEALKQVEGINIVHKGAIANDVV LRGFQKDNINVLVDGVRLHGACPSRMDPPSFHYDFAEIEQVRIIKGPYDLSNPGGLGGLIDAQTKRPGKGFGGELSLGYG DWHGTNAAATASYGTERYDALMGYAYKYSDVPQSGNGKLLTQIYPATSPNRYKNTAIDSKAYEINTGWGKLGLNPTANSR TELSYTYQDADHVLYPYLKMDADYDRTDRMNWSYRIQNLSALLQDLKLQVYWDRVEHLMDDRSRFSSSTSPRFYSMQTDA STQTYGAKLQAELKLGPGSLKSGLDYYNRNWDATNRRAMYFNYRDLAMIPDVTIENFGLFGEYTLPLGGKLSLTGGVRGD LTRAKADRANTMVTAGSSKEFSTISANLQLNYTPFKELVIFTGLGRGTRTPDQQELFLDLPGNPAWRGNQGLKATVNHQA DLGAKYATDRFYVNASIFYSDLQDYVNFYQASATLKSYQNIHASIWGAELGSQVSLPADLFLRGTLSYTEGRNISGNRPL SEMPPLKGTISIRYDNGSFFAELLETLSREQDRIDSSLNEQKTAGWVTTDLKAGYQYKGFSVTGGINNILDTQYYSHLSY LRDPFVSGVGYRVPENGRNVYLTMAYKF
Sequences:
>Translated_668_residues MTVQQLSLLALLLTLTAQTARAEHLLLDEIIVRADKESPKEESLSVREVRESPARDMGEALKQVEGINIVHKGAIANDVV LRGFQKDNINVLVDGVRLHGACPSRMDPPSFHYDFAEIEQVRIIKGPYDLSNPGGLGGLIDAQTKRPGKGFGGELSLGYG DWHGTNAAATASYGTERYDALMGYAYKYSDVPQSGNGKLLTQIYPATSPNRYKNTAIDSKAYEINTGWGKLGLNPTANSR TELSYTYQDADHVLYPYLKMDADYDRTDRMNWSYRIQNLSALLQDLKLQVYWDRVEHLMDDRSRFSSSTSPRFYSMQTDA STQTYGAKLQAELKLGPGSLKSGLDYYNRNWDATNRRAMYFNYRDLAMIPDVTIENFGLFGEYTLPLGGKLSLTGGVRGD LTRAKADRANTMVTAGSSKEFSTISANLQLNYTPFKELVIFTGLGRGTRTPDQQELFLDLPGNPAWRGNQGLKATVNHQA DLGAKYATDRFYVNASIFYSDLQDYVNFYQASATLKSYQNIHASIWGAELGSQVSLPADLFLRGTLSYTEGRNISGNRPL SEMPPLKGTISIRYDNGSFFAELLETLSREQDRIDSSLNEQKTAGWVTTDLKAGYQYKGFSVTGGINNILDTQYYSHLSY LRDPFVSGVGYRVPENGRNVYLTMAYKF >Mature_667_residues TVQQLSLLALLLTLTAQTARAEHLLLDEIIVRADKESPKEESLSVREVRESPARDMGEALKQVEGINIVHKGAIANDVVL RGFQKDNINVLVDGVRLHGACPSRMDPPSFHYDFAEIEQVRIIKGPYDLSNPGGLGGLIDAQTKRPGKGFGGELSLGYGD WHGTNAAATASYGTERYDALMGYAYKYSDVPQSGNGKLLTQIYPATSPNRYKNTAIDSKAYEINTGWGKLGLNPTANSRT ELSYTYQDADHVLYPYLKMDADYDRTDRMNWSYRIQNLSALLQDLKLQVYWDRVEHLMDDRSRFSSSTSPRFYSMQTDAS TQTYGAKLQAELKLGPGSLKSGLDYYNRNWDATNRRAMYFNYRDLAMIPDVTIENFGLFGEYTLPLGGKLSLTGGVRGDL TRAKADRANTMVTAGSSKEFSTISANLQLNYTPFKELVIFTGLGRGTRTPDQQELFLDLPGNPAWRGNQGLKATVNHQAD LGAKYATDRFYVNASIFYSDLQDYVNFYQASATLKSYQNIHASIWGAELGSQVSLPADLFLRGTLSYTEGRNISGNRPLS EMPPLKGTISIRYDNGSFFAELLETLSREQDRIDSSLNEQKTAGWVTTDLKAGYQYKGFSVTGGINNILDTQYYSHLSYL RDPFVSGVGYRVPENGRNVYLTMAYKF
Specific function: Cobalamin Receptor Protein. Also Acts As A Receptor For Bacteriophage Bf23 And Is Necessary For The Uptake Of E Colicins. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74527; Mature: 74396
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQQLSLLALLLTLTAQTARAEHLLLDEIIVRADKESPKEESLSVREVRESPARDMGEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHCCHHHHHHH LKQVEGINIVHKGAIANDVVLRGFQKDNINVLVDGVRLHGACPSRMDPPSFHYDFAEIEQ HHHHCCCCEEECCCCCCCHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHCCE VRIIKGPYDLSNPGGLGGLIDAQTKRPGKGFGGELSLGYGDWHGTNAAATASYGTERYDA EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCHHHHH LMGYAYKYSDVPQSGNGKLLTQIYPATSPNRYKNTAIDSKAYEINTGWGKLGLNPTANSR HHHHEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC TELSYTYQDADHVLYPYLKMDADYDRTDRMNWSYRIQNLSALLQDLKLQVYWDRVEHLMD EEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHEEEHHHHHHHHHH DRSRFSSSTSPRFYSMQTDASTQTYGAKLQAELKLGPGSLKSGLDYYNRNWDATNRRAMY HHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEE FNYRDLAMIPDVTIENFGLFGEYTLPLGGKLSLTGGVRGDLTRAKADRANTMVTAGSSKE EECCCEEECCCCEEECCCCCEEEECCCCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCC FSTISANLQLNYTPFKELVIFTGLGRGTRTPDQQELFLDLPGNPAWRGNQGLKATVNHQA CEEEEEEEEEECCCHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCC DLGAKYATDRFYVNASIFYSDLQDYVNFYQASATLKSYQNIHASIWGAELGSQVSLPADL CCCCEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCHHE FLRGTLSYTEGRNISGNRPLSEMPPLKGTISIRYDNGSFFAELLETLSREQDRIDSSLNE EEEEEEEECCCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCH QKTAGWVTTDLKAGYQYKGFSVTGGINNILDTQYYSHLSYLRDPFVSGVGYRVPENGRNV HHCCCEEEEECCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEE YLTMAYKF EEEEEEEC >Mature Secondary Structure TVQQLSLLALLLTLTAQTARAEHLLLDEIIVRADKESPKEESLSVREVRESPARDMGEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHCCHHHHHHH LKQVEGINIVHKGAIANDVVLRGFQKDNINVLVDGVRLHGACPSRMDPPSFHYDFAEIEQ HHHHCCCCEEECCCCCCCHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHCCE VRIIKGPYDLSNPGGLGGLIDAQTKRPGKGFGGELSLGYGDWHGTNAAATASYGTERYDA EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCHHHHH LMGYAYKYSDVPQSGNGKLLTQIYPATSPNRYKNTAIDSKAYEINTGWGKLGLNPTANSR HHHHEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC TELSYTYQDADHVLYPYLKMDADYDRTDRMNWSYRIQNLSALLQDLKLQVYWDRVEHLMD EEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHEEEHHHHHHHHHH DRSRFSSSTSPRFYSMQTDASTQTYGAKLQAELKLGPGSLKSGLDYYNRNWDATNRRAMY HHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEEE FNYRDLAMIPDVTIENFGLFGEYTLPLGGKLSLTGGVRGDLTRAKADRANTMVTAGSSKE EECCCEEECCCCEEECCCCCEEEECCCCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCC FSTISANLQLNYTPFKELVIFTGLGRGTRTPDQQELFLDLPGNPAWRGNQGLKATVNHQA CEEEEEEEEEECCCHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCC DLGAKYATDRFYVNASIFYSDLQDYVNFYQASATLKSYQNIHASIWGAELGSQVSLPADL CCCCEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCHHE FLRGTLSYTEGRNISGNRPLSEMPPLKGTISIRYDNGSFFAELLETLSREQDRIDSSLNE EEEEEEEECCCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCH QKTAGWVTTDLKAGYQYKGFSVTGGINNILDTQYYSHLSYLRDPFVSGVGYRVPENGRNV HHCCCEEEEECCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEE YLTMAYKF EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA