| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424537
Identifier: 189424537
GI number: 189424537
Start: 1540572
End: 1541084
Strand: Reverse
Name: 189424537
Synonym: Glov_1475
Alternate gene names: NA
Gene position: 1541084-1540572 (Counterclockwise)
Preceding gene: 189424538
Following gene: 189424536
Centisome position: 39.34
GC content: 54.97
Gene sequence:
>513_bases ATGAAAAACCTACTGAAGTTTCTGGCTACCCTGACCCTTTTACTGACAACGGCTGCCCTGGTGACTGCCACTGACAAGGT TGAAGGCCCGGACAGCTGTAAGTACTGCGGCATGGACCGCACCAGATTCAGCCACAGCCGGATGCTGGTGACCTATCAGG ACGGCAGTTCAACCGGCACCTGCAGCCTGCATTGCATGGCAGTAGAACTGGCCAACAATATTGACAAGATGCCGACCTCC ATCAAGGTGGGGGACTTCACCACCCAAAAGCTGATTGATGCAGAGACCGCCCACTGGGTAATCGGCGGTGACAGGATGGG GGTCATGACCTCCCGGGCCAAGTGGGCCTTTGCCAGCAAGGCGGATGCCGAGGCATTTATAAAGGCGCACAAGGGGACTC TGGGCAGCTTTGATGACGCCATCAAGGCAGCCTACGAAGATATGTACAATGACACCAGAATGATCCGTGAACGCCGCAAA ATGATGAAGATGAAGCACGACGGTCATCACTAG
Upstream 100 bases:
>100_bases GACGGAACGTCTACCTGACCATGGCCTATAAATTCTAGTGGGCTGCAATGGACAGCAGGCAAAAACCGCGTTACACATAT TCCAGACAGGAGAACAGACA
Downstream 100 bases:
>100_bases CTGGAATAAACCTGGCCGGGTATCTGACGATATCCGGCCAGTCCTGATCACCGCAAAGGAAACAAGCCATGAACCGCTAT CTGCTCCTGTTTGCTGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKNLLKFLATLTLLLTTAALVTATDKVEGPDSCKYCGMDRTRFSHSRMLVTYQDGSSTGTCSLHCMAVELANNIDKMPTS IKVGDFTTQKLIDAETAHWVIGGDRMGVMTSRAKWAFASKADAEAFIKAHKGTLGSFDDAIKAAYEDMYNDTRMIRERRK MMKMKHDGHH
Sequences:
>Translated_170_residues MKNLLKFLATLTLLLTTAALVTATDKVEGPDSCKYCGMDRTRFSHSRMLVTYQDGSSTGTCSLHCMAVELANNIDKMPTS IKVGDFTTQKLIDAETAHWVIGGDRMGVMTSRAKWAFASKADAEAFIKAHKGTLGSFDDAIKAAYEDMYNDTRMIRERRK MMKMKHDGHH >Mature_170_residues MKNLLKFLATLTLLLTTAALVTATDKVEGPDSCKYCGMDRTRFSHSRMLVTYQDGSSTGTCSLHCMAVELANNIDKMPTS IKVGDFTTQKLIDAETAHWVIGGDRMGVMTSRAKWAFASKADAEAFIKAHKGTLGSFDDAIKAAYEDMYNDTRMIRERRK MMKMKHDGHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18948; Mature: 18948
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLKFLATLTLLLTTAALVTATDKVEGPDSCKYCGMDRTRFSHSRMLVTYQDGSSTGT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC CSLHCMAVELANNIDKMPTSIKVGDFTTQKLIDAETAHWVIGGDRMGVMTSRAKWAFASK EEEEEEHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCEEEECCCCCCEEECCCCCHHCCC ADAEAFIKAHKGTLGSFDDAIKAAYEDMYNDTRMIRERRKMMKMKHDGHH CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNLLKFLATLTLLLTTAALVTATDKVEGPDSCKYCGMDRTRFSHSRMLVTYQDGSSTGT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC CSLHCMAVELANNIDKMPTSIKVGDFTTQKLIDAETAHWVIGGDRMGVMTSRAKWAFASK EEEEEEHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCEEEECCCCCCEEECCCCCHHCCC ADAEAFIKAHKGTLGSFDDAIKAAYEDMYNDTRMIRERRKMMKMKHDGHH CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA