| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424528
Identifier: 189424528
GI number: 189424528
Start: 1528055
End: 1528975
Strand: Reverse
Name: 189424528
Synonym: Glov_1466
Alternate gene names: NA
Gene position: 1528975-1528055 (Counterclockwise)
Preceding gene: 189424529
Following gene: 189424527
Centisome position: 39.03
GC content: 60.15
Gene sequence:
>921_bases ATGGGACTGTTGCAGCGAAAAGCAATCGGCATTGAGATCAGTCACGGCGGTATAGCAGCCGTCATGCTCTCCTGCCCGGC CGGCAGAATCGTACTGCAGCGTGCAACCCGCACGGCACTCCCCGCCAATACCCTTCAACCCAGTTTGAAAGAAGCCCAGG TGCTGCAACCGGCTGCCTTTGTCAACTCACTCCGTGAGGCCTGGGGCAGTCTTAATCTGTCCACCCGCCGGATAGCACTT TCACTGCCCGACAATGCCGGTCTCCTGCTGTTGACACGCCTTGATGAGCCATGGAAAACCCGTGACGAGGCAACCGGCAT GCTCCGCTGGAAACTGGCCAAGCGGCTGGGCATGGAACCTGAACTGCTGCAGCTTGATTTTCACCTGCTGGAACGCAAGC CGGACGGCAGTACTGACCTGCTGGTAGCCCTGGTGCATCGCACGGTGATCCAACAGTATGAAGATCTGTTTCAGGAGGCA GGATTGCAACCGGCACGGATCGGTTTTCATACACTGCACCTCTTGCGGCTGCTTGACCGTCTGCCCATGGATACAGGGCA GATCATTACCCTGTACGACAACGTCCTCGGCACCATTGCACTATCTGATGCCAGGCCGCTTTTCTACCGGGTCAAAACGC TGCCATCCGGACCTGGTCAGATCACCCTGCTGCGCCGGGAACTGGCAACGTCTCTGTCTGCCGCCCGGCACAGCTACGGC GGTATCCTGCCCGGCAGTTGTCATGCCCTGACAGCCCCCCATGATGCTTCGCTTGCAGCACTGCTGACCGAAACACGCGG CACCCCGCCCGGCATGGTTGCCCTTGCAGCGCTGGTTGAGCAGGGGCCTGAACTCAGCCTTACGCCACTGCAGCTGTTTC AGACCAGCGCCGCCGTCGGCGCTGGTCTGGGAGCGATCTGA
Upstream 100 bases:
>100_bases TCAGACCTGATTTATACGCGGCCACCGGATTGACACCGACAGACTTGAATGGTACTGATAGGTCTTACACAATCCGGCCA AACAGGTCATCTGGGGCACT
Downstream 100 bases:
>100_bases TGCAAACGGCCATCAACCTAGCCACCCGCCGTTACTACAACCGCCGCCTGCTCAGGGGCTGGCTGCTCTGTCTGCTGGCC CTGCTGCTGTTGCTCAGCAT
Product: Tfp pilus assembly protein ATPase PilM-like protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilM; Type II Secretion System ATPase PulM
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGLLQRKAIGIEISHGGIAAVMLSCPAGRIVLQRATRTALPANTLQPSLKEAQVLQPAAFVNSLREAWGSLNLSTRRIAL SLPDNAGLLLLTRLDEPWKTRDEATGMLRWKLAKRLGMEPELLQLDFHLLERKPDGSTDLLVALVHRTVIQQYEDLFQEA GLQPARIGFHTLHLLRLLDRLPMDTGQIITLYDNVLGTIALSDARPLFYRVKTLPSGPGQITLLRRELATSLSAARHSYG GILPGSCHALTAPHDASLAALLTETRGTPPGMVALAALVEQGPELSLTPLQLFQTSAAVGAGLGAI
Sequences:
>Translated_306_residues MGLLQRKAIGIEISHGGIAAVMLSCPAGRIVLQRATRTALPANTLQPSLKEAQVLQPAAFVNSLREAWGSLNLSTRRIAL SLPDNAGLLLLTRLDEPWKTRDEATGMLRWKLAKRLGMEPELLQLDFHLLERKPDGSTDLLVALVHRTVIQQYEDLFQEA GLQPARIGFHTLHLLRLLDRLPMDTGQIITLYDNVLGTIALSDARPLFYRVKTLPSGPGQITLLRRELATSLSAARHSYG GILPGSCHALTAPHDASLAALLTETRGTPPGMVALAALVEQGPELSLTPLQLFQTSAAVGAGLGAI >Mature_305_residues GLLQRKAIGIEISHGGIAAVMLSCPAGRIVLQRATRTALPANTLQPSLKEAQVLQPAAFVNSLREAWGSLNLSTRRIALS LPDNAGLLLLTRLDEPWKTRDEATGMLRWKLAKRLGMEPELLQLDFHLLERKPDGSTDLLVALVHRTVIQQYEDLFQEAG LQPARIGFHTLHLLRLLDRLPMDTGQIITLYDNVLGTIALSDARPLFYRVKTLPSGPGQITLLRRELATSLSAARHSYGG ILPGSCHALTAPHDASLAALLTETRGTPPGMVALAALVEQGPELSLTPLQLFQTSAAVGAGLGAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33019; Mature: 32888
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLQRKAIGIEISHGGIAAVMLSCPAGRIVLQRATRTALPANTLQPSLKEAQVLQPAAF CCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH VNSLREAWGSLNLSTRRIALSLPDNAGLLLLTRLDEPWKTRDEATGMLRWKLAKRLGMEP HHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC ELLQLDFHLLERKPDGSTDLLVALVHRTVIQQYEDLFQEAGLQPARIGFHTLHLLRLLDR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LPMDTGQIITLYDNVLGTIALSDARPLFYRVKTLPSGPGQITLLRRELATSLSAARHSYG CCCCCCCEEEEEHHHHHEEEECCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCC GILPGSCHALTAPHDASLAALLTETRGTPPGMVALAALVEQGPELSLTPLQLFQTSAAVG CCCCCCCCEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH AGLGAI CCCCCC >Mature Secondary Structure GLLQRKAIGIEISHGGIAAVMLSCPAGRIVLQRATRTALPANTLQPSLKEAQVLQPAAF CCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH VNSLREAWGSLNLSTRRIALSLPDNAGLLLLTRLDEPWKTRDEATGMLRWKLAKRLGMEP HHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC ELLQLDFHLLERKPDGSTDLLVALVHRTVIQQYEDLFQEAGLQPARIGFHTLHLLRLLDR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LPMDTGQIITLYDNVLGTIALSDARPLFYRVKTLPSGPGQITLLRRELATSLSAARHSYG CCCCCCCEEEEEHHHHHEEEECCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCC GILPGSCHALTAPHDASLAALLTETRGTPPGMVALAALVEQGPELSLTPLQLFQTSAAVG CCCCCCCCEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH AGLGAI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA