| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189424529
Identifier: 189424529
GI number: 189424529
Start: 1529133
End: 1531280
Strand: Reverse
Name: 189424529
Synonym: Glov_1467
Alternate gene names: NA
Gene position: 1531280-1529133 (Counterclockwise)
Preceding gene: 189424530
Following gene: 189424528
Centisome position: 39.09
GC content: 58.94
Gene sequence:
>2148_bases ATGCGTATAGCAACCATGCATCGTTGGCTACTATCATTTCTGGCCGGTACTGCACTGTATCTGACCTGTTTTTCCACTGT CTCCACAGCGGTAGTTGCCGGGCCAAACGCCTTTTACAATGCAACCTATTACTACAACCAGTTTTTCACGACTGCACTGA CCGACGCACTGACAACCATCATGTTGACCGCCAGTCCTCTTCCGGACAGCACGCCGGTTGTCTTTAACCGCCCCGGCGTC ACCCTGACGATACAGGGCGGCTTCAATGACGCCTTCAACGCTCAGGCCGGCACAACCGTATTGGGCAGCAGCCTGACCAT CAGCCAGGGCACCCTGATCCTTGACAACCTTACCATTGGCGGATCAACGACACCTCCTGGTGACCTAACCCCGCCGGTAA CAACGCCCAACCCCGCCGGCGGCAGCTTTACGGCAGCGATCAATGTCCAGCTGAGCACTAATGAGGCTGCCACTATCCAC TACACCACCGACGGCAGCACCCCCACCACCGCCTCTGCGGCCTACACCGGCCTGATTCCGGTCAGCAGCACGACGACGCT TACCTATTTTGCAATAGACAGTGCCGGAAACAGTGAAGCAGCCAAGACCAGCACCTTTGTCATCAACCCGGCAGGAGATG CAGCAGCTAACCACGCCAATCTGACCTACACCGGCAGCACCACCTGCCTGCAGTGCCACACCAAACAGGCCACCGATCTG GCCGGTTCAGTCCACTACAAATGGGAAGGGCCGTATAGCAAGATCAGCAACAAACCGGGGGTAACCGGCGGCAAGCTGAA CACCGCCGTCAACGCCTACTGCATCAACACCCTGGGCAACTGGAACGGCTGCGGTTCATGCCATATCGGTGCCGGTGCCA AGCCGGGCACCATTGCCGATGCCACCCAGAACATCGACTGCCTGATCTGCCACCAGGTTGCCTACAAGCGGGTACGTAAC GCCACCACCGGCCTGTTTGAGCCGGACACCGCCAAGATGACCATCTCCATGGATCAGGCCGTGCAGACCCTGCACAAGCC GGTTAAATCAAACTGTCTGCAGTGCCATGCCAAGGGCGGCGGCGGCGATGCCCTCAAGCGTGGGGATCTGGCCCTGATCA ACGGCACCACCACCGACCGCAACTACGATGTCCATATGGCCTCCACCGGCGCCAATCTGACCTGCCAGCAGTGCCATACC ACCATTGACCACCATGTGGCTGGCGGAGGTTCAGACCTGCGACCAACCGACAATGCCACGCTTATCAGTTGCTCCACCTC GGCCTGCCATACCACCAAAACCAACCTGAGCACCGGCCATAGCAGCTCAACCCTCAGTTCCACCACCATCTATGACATCA GCCACCATGTGGGGCGTGTGGCCTGCCAGACCTGCCATATCCCCTCCTACGGCAGAAAGGCGGCCGATGCCGTACTGGAC ACCGTGACCGGCTTTGGTGATCAGTCCACTGAAACCGACCGCACCTGGGTAACCCCCGAATGGTCAGTGGCCAACAACCG CTGGGAGCCGACCGTTGTCCGTGCCAACAACCTCAAACCGGTCTACGCCTTCTATGACGGCAGTTCCTGGGTCTATGACC TGTATGATGTGGCCGTGATCGATCCGGCCACCGGCAACTACAAGATCAGCCGTCCCAACGGCGGCATCAACACCGCCAAC ACCAAGCTGTATCCGTTCAAGTACAAGACCTCGACCCAGCCGATGCACACCGCCAGCGGCAAGCTGATCGCCCTGAACAC CTCGGTCTACTTCAAGACCGCCGATGTGGCTGCTTCAATTCAGTCCGGTCTGACCAACATGGGTCTCAACCCGGGCGATG CCTACAGCATGGTCAAGGCCGACGAGTACCAGATGCTGAACCACACCGTGGCCCCCAAGGCCAACGCCCTGAAGTGCGCT GCCTGCCACGGCACCACCAGCGTACCGGCAACCCAGATGAACCTGAAGTCAATGGGCTACGCTTTGAAGGCATCAGAATC CGTGGTCTGCGTCCAGTGCCACGGCAGCGAAGACAGTCTGAGCTTCACCAAGGTACACAGCAAGCATGTGGCCGACAGAA GATATGACTGTTCCTTCTGCCACAACTTCAGTCGGGCAGCCGAGCGCGGCCTGAAAACCACCAAATAG
Upstream 100 bases:
>100_bases GTATAGTTTATGGTATTTTAAAATAATATCGACAAGTTTCACCAAACAAAAGTTTCAGCATCTCACACCGGACTCGCCCA CACCACAAGGAGCAGAGGCA
Downstream 100 bases:
>100_bases GCAACTGAGACGCACCACCTTTTACCAGCCCGCCGATTCACCGGCGGGCTTTCTTTTTCAGACCTGATTTATACGCGGCC ACCGGATTGACACCGACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C; NHL Repeat Containing Protein; Cytochrome C Chain A; Esterase; FG-GAP Repeat-Containing Protein; S-Layer Domain-Containing Protein; APHP Domain-Containing Protein; Class III Cytochrome C; Poly(3-Hydroxybutyrate) Depolymerase
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MRIATMHRWLLSFLAGTALYLTCFSTVSTAVVAGPNAFYNATYYYNQFFTTALTDALTTIMLTASPLPDSTPVVFNRPGV TLTIQGGFNDAFNAQAGTTVLGSSLTISQGTLILDNLTIGGSTTPPGDLTPPVTTPNPAGGSFTAAINVQLSTNEAATIH YTTDGSTPTTASAAYTGLIPVSSTTTLTYFAIDSAGNSEAAKTSTFVINPAGDAAANHANLTYTGSTTCLQCHTKQATDL AGSVHYKWEGPYSKISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVAYKRVRN ATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLALINGTTTDRNYDVHMASTGANLTCQQCHT TIDHHVAGGGSDLRPTDNATLISCSTSACHTTKTNLSTGHSSSTLSSTTIYDISHHVGRVACQTCHIPSYGRKAADAVLD TVTGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLYDVAVIDPATGNYKISRPNGGINTAN TKLYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAASIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALKCA ACHGTTSVPATQMNLKSMGYALKASESVVCVQCHGSEDSLSFTKVHSKHVADRRYDCSFCHNFSRAAERGLKTTK
Sequences:
>Translated_715_residues MRIATMHRWLLSFLAGTALYLTCFSTVSTAVVAGPNAFYNATYYYNQFFTTALTDALTTIMLTASPLPDSTPVVFNRPGV TLTIQGGFNDAFNAQAGTTVLGSSLTISQGTLILDNLTIGGSTTPPGDLTPPVTTPNPAGGSFTAAINVQLSTNEAATIH YTTDGSTPTTASAAYTGLIPVSSTTTLTYFAIDSAGNSEAAKTSTFVINPAGDAAANHANLTYTGSTTCLQCHTKQATDL AGSVHYKWEGPYSKISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVAYKRVRN ATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLALINGTTTDRNYDVHMASTGANLTCQQCHT TIDHHVAGGGSDLRPTDNATLISCSTSACHTTKTNLSTGHSSSTLSSTTIYDISHHVGRVACQTCHIPSYGRKAADAVLD TVTGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLYDVAVIDPATGNYKISRPNGGINTAN TKLYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAASIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALKCA ACHGTTSVPATQMNLKSMGYALKASESVVCVQCHGSEDSLSFTKVHSKHVADRRYDCSFCHNFSRAAERGLKTTK >Mature_715_residues MRIATMHRWLLSFLAGTALYLTCFSTVSTAVVAGPNAFYNATYYYNQFFTTALTDALTTIMLTASPLPDSTPVVFNRPGV TLTIQGGFNDAFNAQAGTTVLGSSLTISQGTLILDNLTIGGSTTPPGDLTPPVTTPNPAGGSFTAAINVQLSTNEAATIH YTTDGSTPTTASAAYTGLIPVSSTTTLTYFAIDSAGNSEAAKTSTFVINPAGDAAANHANLTYTGSTTCLQCHTKQATDL AGSVHYKWEGPYSKISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIADATQNIDCLICHQVAYKRVRN ATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGGGGDALKRGDLALINGTTTDRNYDVHMASTGANLTCQQCHT TIDHHVAGGGSDLRPTDNATLISCSTSACHTTKTNLSTGHSSSTLSSTTIYDISHHVGRVACQTCHIPSYGRKAADAVLD TVTGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLYDVAVIDPATGNYKISRPNGGINTAN TKLYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAASIQSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALKCA ACHGTTSVPATQMNLKSMGYALKASESVVCVQCHGSEDSLSFTKVHSKHVADRRYDCSFCHNFSRAAERGLKTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75644; Mature: 75644
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIATMHRWLLSFLAGTALYLTCFSTVSTAVVAGPNAFYNATYYYNQFFTTALTDALTTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEHHHHHHHHHHHHHEE MLTASPLPDSTPVVFNRPGVTLTIQGGFNDAFNAQAGTTVLGSSLTISQGTLILDNLTIG EEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCEEEEEEEEEC GSTTPPGDLTPPVTTPNPAGGSFTAAINVQLSTNEAATIHYTTDGSTPTTASAAYTGLIP CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEE VSSTTTLTYFAIDSAGNSEAAKTSTFVINPAGDAAANHANLTYTGSTTCLQCHTKQATDL CCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEECCCCHHCC AGSVHYKWEGPYSKISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIAD CCEEEEEECCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCC ATQNIDCLICHQVAYKRVRNATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGG CCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCC GGDALKRGDLALINGTTTDRNYDVHMASTGANLTCQQCHTTIDHHVAGGGSDLRPTDNAT CCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEHHHHHHHHHHEECCCCCCCCCCCCCE LISCSTSACHTTKTNLSTGHSSSTLSSTTIYDISHHVGRVACQTCHIPSYGRKAADAVLD EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHEEEEEECCCCCCCHHHHHHHH TVTGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLYDVAVI HHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEEEEE DPATGNYKISRPNGGINTANTKLYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAASI CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECEEEEEEHHHHHHH QSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALKCAACHGTTSVPATQMNLKSMGY HHCHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHCCHHHCCE ALKASESVVCVQCHGSEDSLSFTKVHSKHVADRRYDCSFCHNFSRAAERGLKTTK EEECCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRIATMHRWLLSFLAGTALYLTCFSTVSTAVVAGPNAFYNATYYYNQFFTTALTDALTTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEHHHHHHHHHHHHHEE MLTASPLPDSTPVVFNRPGVTLTIQGGFNDAFNAQAGTTVLGSSLTISQGTLILDNLTIG EEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCEEEEEEEEEC GSTTPPGDLTPPVTTPNPAGGSFTAAINVQLSTNEAATIHYTTDGSTPTTASAAYTGLIP CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEE VSSTTTLTYFAIDSAGNSEAAKTSTFVINPAGDAAANHANLTYTGSTTCLQCHTKQATDL CCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEECCCCHHCC AGSVHYKWEGPYSKISNKPGVTGGKLNTAVNAYCINTLGNWNGCGSCHIGAGAKPGTIAD CCEEEEEECCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCCCC ATQNIDCLICHQVAYKRVRNATTGLFEPDTAKMTISMDQAVQTLHKPVKSNCLQCHAKGG CCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCC GGDALKRGDLALINGTTTDRNYDVHMASTGANLTCQQCHTTIDHHVAGGGSDLRPTDNAT CCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEHHHHHHHHHHEECCCCCCCCCCCCCE LISCSTSACHTTKTNLSTGHSSSTLSSTTIYDISHHVGRVACQTCHIPSYGRKAADAVLD EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHEEEEEECCCCCCCHHHHHHHH TVTGFGDQSTETDRTWVTPEWSVANNRWEPTVVRANNLKPVYAFYDGSSWVYDLYDVAVI HHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEEEEE DPATGNYKISRPNGGINTANTKLYPFKYKTSTQPMHTASGKLIALNTSVYFKTADVAASI CCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECEEEEEEHHHHHHH QSGLTNMGLNPGDAYSMVKADEYQMLNHTVAPKANALKCAACHGTTSVPATQMNLKSMGY HHCHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHCCHHHCCE ALKASESVVCVQCHGSEDSLSFTKVHSKHVADRRYDCSFCHNFSRAAERGLKTTK EEECCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA