| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189424473
Identifier: 189424473
GI number: 189424473
Start: 1454895
End: 1456115
Strand: Reverse
Name: 189424473
Synonym: Glov_1409
Alternate gene names: NA
Gene position: 1456115-1454895 (Counterclockwise)
Preceding gene: 189424474
Following gene: 189424472
Centisome position: 37.17
GC content: 39.23
Gene sequence:
>1221_bases ATGGCTCTTGCTCCCATAGTAAAATTGTACCGCAAGGCAAATAGACCCCCAATAAGTGGTGGGGTGTTCTCGTCGCTATT AGCCATTGATACTGATGTGATCAGTTTGATCAAGTCTATCAGAGAATTAAATTCGAACCTGTTTGACGAAATACTTGTTG ATGATGCTGAGATAACGACTACTGAGGCGTTGCCTGATCAAGGTAGTCAAGTTGAATTAATATTCAGGTTGCCTACTGGT ACAGACTGTAAATTTTACCCTTCTTTGTCTGGCTTGATAACTGGTGCTCCTAAGATATCTCGCGGCGAAATGCCATCTGA ATTTTATTTGATTGAAGAGGATTATTTTAACGGGACAGATACGCCATTTCCTAAGTTAGAAAAATTATCTGTCGTCTGCA AGCTGATCAAAGGTTTATCTGATTTAGCTCATTATCACGATGAAAAGACAGCTGCAGGACATTATAGATTAATATTCATC CAACCTGAAGATTCAACGCAGCCAGCTTCCAAGACTGTAGAGATAGACACGACCATCAATGTGGATATGCTTGATGGTCG CATTCCCGATTTAACTCTTGTAGAATCCCTGCGGGCAGACAATCCCAAGACTGATCCTCACTATAGCTCTAAGGTAGGAG TATTCCGCGTGTCCTTAGCGGAGTTTTTGCAGAAGTGCCCTGTCGGACAGCCTACATTCTCATTTCTTGTCTCTGAATGG GAAGATTTTATCAATATTTTTAACAACAATCTTGATACATATTTGAGTGGTTTTGCTTTTCACAAAGCAAAAAGAGAGGT AGCGGAAGCTGAGTTAAAGATAGCCGATGAATTTTCCAAGATAATTATCGACATAACAGGTAAATTGTTAGGTATCCCTA TATCCCTTGCAGCAGCAATTGCAATTATGAAATCTACATCAGTTTTAGAAAGTTTGATGATAGTAATTGGCCTTGGTTTA GCAACGCTTATTTTCTCTGGAACAGTAGGCAATCAGCAGCGCCAATTACAAAGAATAATTCATGCAAAGAATATTGTCTT TAACGCACTTGAAGGGAAACAGGAAGTTTATCCGGATGAACTAAAGTCTGCAATATCTGAAATGAAGACAGGATTGGATA AAAACGAAAATAAATTGCGATGGTTGTTACGGTTGTTTAGATGCTTAAGTTGGGCTCCATTCCTTGTCGGGGTGGTTATT TTCGGAGTCTTTTATTTATAA
Upstream 100 bases:
>100_bases TTACGACCGAGAAAATAATCGCATTACGATAAAGGATCTACCTGATAGTTTGATCGAAAAAATCTGTGAAGAGCTAGAAA ACAGGCCAGAGGAGTAAGTC
Downstream 100 bases:
>100_bases ACGAGTTCCCCGCAATGAAATTACCTTTGACACATAAAGCTTATCTCTTTACCCATACGCTTCCTGTACTCAAGGTGCAG AGCGCGTATTTTTCCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MALAPIVKLYRKANRPPISGGVFSSLLAIDTDVISLIKSIRELNSNLFDEILVDDAEITTTEALPDQGSQVELIFRLPTG TDCKFYPSLSGLITGAPKISRGEMPSEFYLIEEDYFNGTDTPFPKLEKLSVVCKLIKGLSDLAHYHDEKTAAGHYRLIFI QPEDSTQPASKTVEIDTTINVDMLDGRIPDLTLVESLRADNPKTDPHYSSKVGVFRVSLAEFLQKCPVGQPTFSFLVSEW EDFINIFNNNLDTYLSGFAFHKAKREVAEAELKIADEFSKIIIDITGKLLGIPISLAAAIAIMKSTSVLESLMIVIGLGL ATLIFSGTVGNQQRQLQRIIHAKNIVFNALEGKQEVYPDELKSAISEMKTGLDKNENKLRWLLRLFRCLSWAPFLVGVVI FGVFYL
Sequences:
>Translated_406_residues MALAPIVKLYRKANRPPISGGVFSSLLAIDTDVISLIKSIRELNSNLFDEILVDDAEITTTEALPDQGSQVELIFRLPTG TDCKFYPSLSGLITGAPKISRGEMPSEFYLIEEDYFNGTDTPFPKLEKLSVVCKLIKGLSDLAHYHDEKTAAGHYRLIFI QPEDSTQPASKTVEIDTTINVDMLDGRIPDLTLVESLRADNPKTDPHYSSKVGVFRVSLAEFLQKCPVGQPTFSFLVSEW EDFINIFNNNLDTYLSGFAFHKAKREVAEAELKIADEFSKIIIDITGKLLGIPISLAAAIAIMKSTSVLESLMIVIGLGL ATLIFSGTVGNQQRQLQRIIHAKNIVFNALEGKQEVYPDELKSAISEMKTGLDKNENKLRWLLRLFRCLSWAPFLVGVVI FGVFYL >Mature_405_residues ALAPIVKLYRKANRPPISGGVFSSLLAIDTDVISLIKSIRELNSNLFDEILVDDAEITTTEALPDQGSQVELIFRLPTGT DCKFYPSLSGLITGAPKISRGEMPSEFYLIEEDYFNGTDTPFPKLEKLSVVCKLIKGLSDLAHYHDEKTAAGHYRLIFIQ PEDSTQPASKTVEIDTTINVDMLDGRIPDLTLVESLRADNPKTDPHYSSKVGVFRVSLAEFLQKCPVGQPTFSFLVSEWE DFINIFNNNLDTYLSGFAFHKAKREVAEAELKIADEFSKIIIDITGKLLGIPISLAAAIAIMKSTSVLESLMIVIGLGLA TLIFSGTVGNQQRQLQRIIHAKNIVFNALEGKQEVYPDELKSAISEMKTGLDKNENKLRWLLRLFRCLSWAPFLVGVVIF GVFYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45127; Mature: 44995
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAPIVKLYRKANRPPISGGVFSSLLAIDTDVISLIKSIRELNSNLFDEILVDDAEITT CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TEALPDQGSQVELIFRLPTGTDCKFYPSLSGLITGAPKISRGEMPSEFYLIEEDYFNGTD HHCCCCCCCEEEEEEECCCCCCCEECCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC TPFPKLEKLSVVCKLIKGLSDLAHYHDEKTAAGHYRLIFIQPEDSTQPASKTVEIDTTIN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECEEE VDMLDGRIPDLTLVESLRADNPKTDPHYSSKVGVFRVSLAEFLQKCPVGQPTFSFLVSEW EEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH EDFINIFNNNLDTYLSGFAFHKAKREVAEAELKIADEFSKIIIDITGKLLGIPISLAAAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AIMKSTSVLESLMIVIGLGLATLIFSGTVGNQQRQLQRIIHAKNIVFNALEGKQEVYPDE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH LKSAISEMKTGLDKNENKLRWLLRLFRCLSWAPFLVGVVIFGVFYL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC >Mature Secondary Structure ALAPIVKLYRKANRPPISGGVFSSLLAIDTDVISLIKSIRELNSNLFDEILVDDAEITT CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TEALPDQGSQVELIFRLPTGTDCKFYPSLSGLITGAPKISRGEMPSEFYLIEEDYFNGTD HHCCCCCCCEEEEEEECCCCCCCEECCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCC TPFPKLEKLSVVCKLIKGLSDLAHYHDEKTAAGHYRLIFIQPEDSTQPASKTVEIDTTIN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECEEE VDMLDGRIPDLTLVESLRADNPKTDPHYSSKVGVFRVSLAEFLQKCPVGQPTFSFLVSEW EEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH EDFINIFNNNLDTYLSGFAFHKAKREVAEAELKIADEFSKIIIDITGKLLGIPISLAAAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AIMKSTSVLESLMIVIGLGLATLIFSGTVGNQQRQLQRIIHAKNIVFNALEGKQEVYPDE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH LKSAISEMKTGLDKNENKLRWLLRLFRCLSWAPFLVGVVIFGVFYL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA