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The map label for this gene is ndpA [C]

Identifier: 189424474

GI number: 189424474

Start: 1456119

End: 1457234

Strand: Reverse

Name: ndpA [C]

Synonym: Glov_1410

Alternate gene names: 189424474

Gene position: 1457234-1456119 (Counterclockwise)

Preceding gene: 189424475

Following gene: 189424473

Centisome position: 37.2

GC content: 46.06

Gene sequence:

>1116_bases
ATGCCTGATATCATCATTAACAAGGTAGTAATTCATGAGCTTGTTAAAGAACAGCACCAACCAATTCAACCATCTAACCT
AAGGGCAGCCGTTCTAGATCCTACTAACGGGATTGTGCTAAAGTTGGTTGACGGCATCACGTCGCTTTATGGCACTCGCA
ACAACAGCGCCCATTATGGAACCTTCCGTACTGGCGACGGCAGCGGAGCCTTTCCGGGCAGTTTTAGCACATATACTGAA
TCTGCGACCCCGGATGACGCGCAGTTTATGGCACTAACGCGAGTCGCAATGGACGAACTGTATAGAAAAGCTGAATCAAG
CCAAGCGTCATCCGGGGGCTATATACTTTTCGCTGATTATTCAAGCGCTCAGTCAAGGTTTTTCATAATAGCAATGATCA
AGCAAAAAGAGGGAATAAGGCTTAGCGAAGGCCTTGAACCAGAGGAACTCACAGAGCTTGATATGAATCGCCTCTACCAG
GCAGCTCGCGTTAATTTCGGGAAGTTGTCTGCATATCTTGCTGCACCTGAGGCTGACCGTCAAGAGTTGAGCTATCTGAG
TTTTGTAAGCCCAAATGCTGGAAAGACGGCGGCTGGTTATTTTGTAACTGCACTTGGTTGCGCCCCCGGAGCTGCATCAG
CACGTGCTACCGACACTTTGGTTAAAGAAAGTACAGCATTTTTTAGAAACAACGACGCTCTTAACCCTTTTCGCAAGAGG
TTTAAAGACAACTTGCTTGCATACCTTTCGAGAAAAGAGGAGGTAGGAGAATCCGTTAAACTCAGCGAGGTGGAAGAGAT
AGCACGTCAGTTCATGCCAGCTGGAGAGCCGGGCCAAGTCGACGAGATGGCTTGTGCTCTCATCTCACATCTGAATAGTG
AAGAGCATGCTGTACCAGTTGAATTTCCCGTAAACAAGGCTGCATTAAAAAAACACACGCATATTATTTACAGTGCTGAC
AATTGGGATCTTAAATTTGAACGTCATGCTCTCGGGGTGACTGACGCTGCTCAAATATATTACGACCGAGAAAATAATCG
CATTACGATAAAGGATCTACCTGATAGTTTGATCGAAAAAATCTGTGAAGAGCTAGAAAACAGGCCAGAGGAGTAA

Upstream 100 bases:

>100_bases
GACAGTACAATCACATTGTGTGGGAAACGCCTGAAAGTCTGAAAGAGCAGCTGTATTACCGAATTTGTGCTGTTATCGGA
AAAAGAACTTAGGGGGATGT

Downstream 100 bases:

>100_bases
GTCATGGCTCTTGCTCCCATAGTAAAATTGTACCGCAAGGCAAATAGACCCCCAATAAGTGGTGGGGTGTTCTCGTCGCT
ATTAGCCATTGATACTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MPDIIINKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYGTFRTGDGSGAFPGSFSTYTE
SATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADYSSAQSRFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQ
AARVNFGKLSAYLAAPEADRQELSYLSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKR
FKDNLLAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEEHAVPVEFPVNKAALKKHTHIIYSAD
NWDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEKICEELENRPEE

Sequences:

>Translated_371_residues
MPDIIINKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYGTFRTGDGSGAFPGSFSTYTE
SATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADYSSAQSRFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQ
AARVNFGKLSAYLAAPEADRQELSYLSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKR
FKDNLLAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEEHAVPVEFPVNKAALKKHTHIIYSAD
NWDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEKICEELENRPEE
>Mature_370_residues
PDIIINKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYGTFRTGDGSGAFPGSFSTYTES
ATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADYSSAQSRFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQA
ARVNFGKLSAYLAAPEADRQELSYLSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKRF
KDNLLAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEEHAVPVEFPVNKAALKKHTHIIYSADN
WDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEKICEELENRPEE

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=357, Percent_Identity=21.2885154061625, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 41116; Mature: 40984

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIIINKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYG
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCCCCCEEC
TFRTGDGSGAFPGSFSTYTESATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADY
CEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
SSAQSRFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQAARVNFGKLSAYLAAPEADR
CCCCCCEEEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCH
QELSYLSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKR
HHHHHHHEECCCCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
FKDNLLAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEEHAVPV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEE
EFPVNKAALKKHTHIIYSADNWDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEK
ECCCCHHHHHHCCEEEEECCCCCEEEEHHHCCCCCEEEEEEECCCCEEEEECCCHHHHHH
ICEELENRPEE
HHHHHHCCCCC
>Mature Secondary Structure 
PDIIINKVVIHELVKEQHQPIQPSNLRAAVLDPTNGIVLKLVDGITSLYGTRNNSAHYG
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCCCCCEEC
TFRTGDGSGAFPGSFSTYTESATPDDAQFMALTRVAMDELYRKAESSQASSGGYILFADY
CEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
SSAQSRFFIIAMIKQKEGIRLSEGLEPEELTELDMNRLYQAARVNFGKLSAYLAAPEADR
CCCCCCEEEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCH
QELSYLSFVSPNAGKTAAGYFVTALGCAPGAASARATDTLVKESTAFFRNNDALNPFRKR
HHHHHHHEECCCCCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
FKDNLLAYLSRKEEVGESVKLSEVEEIARQFMPAGEPGQVDEMACALISHLNSEEHAVPV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEE
EFPVNKAALKKHTHIIYSADNWDLKFERHALGVTDAAQIYYDRENNRITIKDLPDSLIEK
ECCCCHHHHHHCCEEEEECCCCCEEEEHHHCCCCCEEEEEEECCCCEEEEECCCHHHHHH
ICEELENRPEE
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA