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The map label for this gene is ydjI [H]

Identifier: 189424447

GI number: 189424447

Start: 1419514

End: 1420677

Strand: Reverse

Name: ydjI [H]

Synonym: Glov_1383

Alternate gene names: 189424447

Gene position: 1420677-1419514 (Counterclockwise)

Preceding gene: 189424448

Following gene: 189424446

Centisome position: 36.26

GC content: 57.82

Gene sequence:

>1164_bases
ATGGCATTGTGGGACAAATTAAAAGCTGAACTGATTGACATTGTCCAATGGCTGGACGACACCAACGACACCCTGATTTA
CCGTTTCCCTCGCTACAACAACGAGATAAAGAATGGTGCCAAGCTGGTGGTCCGTGAAGGACAGGCAGCGGTCTTCATCA
ACGAAGGCCAGATTGCCGATGTCTTTAAACCGGGCACCTATGACTTGACCACTCAGAACCTGCCGATCCTGGCCACCCTC
AAGGGCTGGAAATACGGTTTTGAATCCCCCTTCAAGGCCGAGGTCTACTTTGTCTCAACCCGCCAGTTCACCAATCTCAA
GTGGGGTACACCCGGTCCCTGCACCATGCGCGACCCGGAGTTCGGTGCGGTGCGGGTAACGGCCTTCGGCATCTATTCGA
TCAAGATCAAGGATCCGGCTGTATTCATCCGTGAGATCGCAGGAACCGACGGTGAATTCAACACTGATGAAATTCAGGAC
AACCTGAAAGGTAAGATCGGGATGCGGATCAAGGAAGTAATGCCGGAGCTGCAGATTCCGGTGATTGACCTTGAGAGCAA
GGTTTTTACCATGGGTGAGATGTTGAAAGAGCGGATAGCCCCGGCCTTTGAAGGGTTGGGAATCGCCCTGACCGAGGTAC
AGGTACAGGATGTGGGTCTGCCGGAAGAGGTGGAGCGGGCGATTGACAAGGCCGGCGCCATGCGGGCCATCGGCAATATG
CAGATGTACACCCAATACGAGACCGCCAATTCCATCAATGATGCCGCCAACAATCCCGGCGGTCTGGCTGCGGCCGGTGT
GGGGATCGGCATGGGGTTTGGCATGGGCGGCCAGATGGGCAATGCCATGGGAGGCGCCTTTACCAACATGGTGCAGCAGC
CCGGTATCACGCCGGGATTCTCCGGTACTGGCCAGTCGGCATCTCAGCCGCCACCAATGCCCGGACCGCCCCCTCTACCC
CAGCTGAACCTGTTTGTGGCCATGAACGGTCAGCAGGCGGGTCCGTTTGAGGCCCCGGCTCTGCAGCAGATGGTTATGAG
CGGGCAACTGACCCGTGAAACCCTGGTCTGGAAACAGGGCATGGCAAGTTGGGCAGCAGCCGGCACCCTGGCTGAGCTGG
CTCCGGTCTTTGGCGCAGTCCCGCCCCCCATGCCTCCGGCGTAA

Upstream 100 bases:

>100_bases
ATAAAAATCTTACACCCTACCCGCTTGCATCCTGTCCAAAAGCATTTACACTATACCTCTGCGCTGCATAAATCTAAAAT
CCCCCGTTATGGAGGCTCCT

Downstream 100 bases:

>100_bases
ACCGGGAGATTACGTATGAGCGACCCAACCCAACAGACACCGAATACCGTAACCAAACAGTTCCCCTGTGGGTCATGCGG
GGCCAAGCTAGAGTTCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MALWDKLKAELIDIVQWLDDTNDTLIYRFPRYNNEIKNGAKLVVREGQAAVFINEGQIADVFKPGTYDLTTQNLPILATL
KGWKYGFESPFKAEVYFVSTRQFTNLKWGTPGPCTMRDPEFGAVRVTAFGIYSIKIKDPAVFIREIAGTDGEFNTDEIQD
NLKGKIGMRIKEVMPELQIPVIDLESKVFTMGEMLKERIAPAFEGLGIALTEVQVQDVGLPEEVERAIDKAGAMRAIGNM
QMYTQYETANSINDAANNPGGLAAAGVGIGMGFGMGGQMGNAMGGAFTNMVQQPGITPGFSGTGQSASQPPPMPGPPPLP
QLNLFVAMNGQQAGPFEAPALQQMVMSGQLTRETLVWKQGMASWAAAGTLAELAPVFGAVPPPMPPA

Sequences:

>Translated_387_residues
MALWDKLKAELIDIVQWLDDTNDTLIYRFPRYNNEIKNGAKLVVREGQAAVFINEGQIADVFKPGTYDLTTQNLPILATL
KGWKYGFESPFKAEVYFVSTRQFTNLKWGTPGPCTMRDPEFGAVRVTAFGIYSIKIKDPAVFIREIAGTDGEFNTDEIQD
NLKGKIGMRIKEVMPELQIPVIDLESKVFTMGEMLKERIAPAFEGLGIALTEVQVQDVGLPEEVERAIDKAGAMRAIGNM
QMYTQYETANSINDAANNPGGLAAAGVGIGMGFGMGGQMGNAMGGAFTNMVQQPGITPGFSGTGQSASQPPPMPGPPPLP
QLNLFVAMNGQQAGPFEAPALQQMVMSGQLTRETLVWKQGMASWAAAGTLAELAPVFGAVPPPMPPA
>Mature_386_residues
ALWDKLKAELIDIVQWLDDTNDTLIYRFPRYNNEIKNGAKLVVREGQAAVFINEGQIADVFKPGTYDLTTQNLPILATLK
GWKYGFESPFKAEVYFVSTRQFTNLKWGTPGPCTMRDPEFGAVRVTAFGIYSIKIKDPAVFIREIAGTDGEFNTDEIQDN
LKGKIGMRIKEVMPELQIPVIDLESKVFTMGEMLKERIAPAFEGLGIALTEVQVQDVGLPEEVERAIDKAGAMRAIGNMQ
MYTQYETANSINDAANNPGGLAAAGVGIGMGFGMGGQMGNAMGGAFTNMVQQPGITPGFSGTGQSASQPPPMPGPPPLPQ
LNLFVAMNGQQAGPFEAPALQQMVMSGQLTRETLVWKQGMASWAAAGTLAELAPVFGAVPPPMPPA

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 41741; Mature: 41609

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALWDKLKAELIDIVQWLDDTNDTLIYRFPRYNNEIKNGAKLVVREGQAAVFINEGQIAD
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCEEE
VFKPGTYDLTTQNLPILATLKGWKYGFESPFKAEVYFVSTRQFTNLKWGTPGPCTMRDPE
EECCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCC
FGAVRVTAFGIYSIKIKDPAVFIREIAGTDGEFNTDEIQDNLKGKIGMRIKEVMPELQIP
CCEEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHCCHHCCHHHHHCCHHCCC
VIDLESKVFTMGEMLKERIAPAFEGLGIALTEVQVQDVGLPEEVERAIDKAGAMRAIGNM
EEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
QMYTQYETANSINDAANNPGGLAAAGVGIGMGFGMGGQMGNAMGGAFTNMVQQPGITPGF
EEEEEEHHHCCHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
SGTGQSASQPPPMPGPPPLPQLNLFVAMNGQQAGPFEAPALQQMVMSGQLTRETLVWKQG
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
MASWAAAGTLAELAPVFGAVPPPMPPA
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ALWDKLKAELIDIVQWLDDTNDTLIYRFPRYNNEIKNGAKLVVREGQAAVFINEGQIAD
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCEEE
VFKPGTYDLTTQNLPILATLKGWKYGFESPFKAEVYFVSTRQFTNLKWGTPGPCTMRDPE
EECCCCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCC
FGAVRVTAFGIYSIKIKDPAVFIREIAGTDGEFNTDEIQDNLKGKIGMRIKEVMPELQIP
CCEEEEEEEEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHCCHHCCHHHHHCCHHCCC
VIDLESKVFTMGEMLKERIAPAFEGLGIALTEVQVQDVGLPEEVERAIDKAGAMRAIGNM
EEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
QMYTQYETANSINDAANNPGGLAAAGVGIGMGFGMGGQMGNAMGGAFTNMVQQPGITPGF
EEEEEEHHHCCHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
SGTGQSASQPPPMPGPPPLPQLNLFVAMNGQQAGPFEAPALQQMVMSGQLTRETLVWKQG
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
MASWAAAGTLAELAPVFGAVPPPMPPA
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]