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The map label for this gene is ycgE [C]

Identifier: 189424448

GI number: 189424448

Start: 1420987

End: 1421883

Strand: Reverse

Name: ycgE [C]

Synonym: Glov_1384

Alternate gene names: 189424448

Gene position: 1421883-1420987 (Counterclockwise)

Preceding gene: 189424453

Following gene: 189424447

Centisome position: 36.29

GC content: 53.07

Gene sequence:

>897_bases
ATGAACAAGCCACTAACCATTGCCGATATTGAACGAGAGACCGGTATCAGCCGTGACACGTTGCGGATATGGGAACGGCG
TTACGGTTTTCCTGAGCCTCAACGCAACCAGCGCAGCGAACGCAATTACAGCCAAGAACAGCTTGAACGCCTGCGGCTGA
TCAAGCAACTGACTGATAACGGCATGAGACCAGGCAAGCTTGCCAGACTTGATCTGCAGCAGTTACAGCTACTGCTACAG
GAACATACCGATCTGCCTGAACTGTCTCCGGTAGTGGCAAGCCTGCTTGAACTGGTTCAGGATCAGATACCAGGCCCCCT
GGAGCAACGTCTTGAGCAGCTACTACATCAGCATGGACTACCAGCATTTCTGACTGAAATTGTAGCTCCCCTGAATCATG
CAGTGGGAAAGTCCTGGGCAGACGGGAAGATCGGCGTGCTTGATGAACACTTGTATGCCGAGCAGATAAGGATGGTTCTG
GGCCGCATTCTCAATGAGTTGAAACCAGCACCTGCAGCCCCACGGGTACTACTGACCACCCTGCCTGGTGAGCAGCATGG
TATCGGCATGTTGATGGTTGCCTGCATGTTGAGACATGAAGGAGCAGCACCGCTTGTTGCCGGTGTGCAGACACCGCTTG
ACGAGATTGTACGCGGGGCAGTGGGCGGAGGATGTTCAGTTGTCGGCATCTCCTGCAGTAGCTACCTGCAGCGGCGTCAG
ATCACCAGCCAACTGGTACGATTACGTTCTATGCTACCTCAGGAGATCAGGCTATGGGCAGGTGGCAGTGGAGTTAAAGA
ACTTACAGCCATGCCGTCAGGAATACAGCTCTTCCAAAGCCTGAACCAGATTTCTACAGTTTTGCAACAATTAGCCTCCA
CCCAGAAAAGGCCATAA

Upstream 100 bases:

>100_bases
ATGTCCTTTTAGCTGTTGAAACAATCCCAACCAACAGTAGACAACTCACAACTATAGTGCTAATTTTGCATCAAATTTAA
GTTTTGTCTAGGACAAAAAA

Downstream 100 bases:

>100_bases
TAATGACTATACATGAGCAGATGCAGCCGAATACGATAGTTTCTGAACCTTGTCAAACACCATAAACGCTTCGCCTTGGC
CTCTGCTGCAGATAATTACA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; MerR Family Transcriptional Regulator; Transcriptional Regulator; MerR-Family Transcriptional Regulator; Transcriptional Regulator Merr Family

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MNKPLTIADIERETGISRDTLRIWERRYGFPEPQRNQRSERNYSQEQLERLRLIKQLTDNGMRPGKLARLDLQQLQLLLQ
EHTDLPELSPVVASLLELVQDQIPGPLEQRLEQLLHQHGLPAFLTEIVAPLNHAVGKSWADGKIGVLDEHLYAEQIRMVL
GRILNELKPAPAAPRVLLTTLPGEQHGIGMLMVACMLRHEGAAPLVAGVQTPLDEIVRGAVGGGCSVVGISCSSYLQRRQ
ITSQLVRLRSMLPQEIRLWAGGSGVKELTAMPSGIQLFQSLNQISTVLQQLASTQKRP

Sequences:

>Translated_298_residues
MNKPLTIADIERETGISRDTLRIWERRYGFPEPQRNQRSERNYSQEQLERLRLIKQLTDNGMRPGKLARLDLQQLQLLLQ
EHTDLPELSPVVASLLELVQDQIPGPLEQRLEQLLHQHGLPAFLTEIVAPLNHAVGKSWADGKIGVLDEHLYAEQIRMVL
GRILNELKPAPAAPRVLLTTLPGEQHGIGMLMVACMLRHEGAAPLVAGVQTPLDEIVRGAVGGGCSVVGISCSSYLQRRQ
ITSQLVRLRSMLPQEIRLWAGGSGVKELTAMPSGIQLFQSLNQISTVLQQLASTQKRP
>Mature_298_residues
MNKPLTIADIERETGISRDTLRIWERRYGFPEPQRNQRSERNYSQEQLERLRLIKQLTDNGMRPGKLARLDLQQLQLLLQ
EHTDLPELSPVVASLLELVQDQIPGPLEQRLEQLLHQHGLPAFLTEIVAPLNHAVGKSWADGKIGVLDEHLYAEQIRMVL
GRILNELKPAPAAPRVLLTTLPGEQHGIGMLMVACMLRHEGAAPLVAGVQTPLDEIVRGAVGGGCSVVGISCSSYLQRRQ
ITSQLVRLRSMLPQEIRLWAGGSGVKELTAMPSGIQLFQSLNQISTVLQQLASTQKRP

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33156; Mature: 33156

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPLTIADIERETGISRDTLRIWERRYGFPEPQRNQRSERNYSQEQLERLRLIKQLTDN
CCCCCCCEECHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
GMRPGKLARLDLQQLQLLLQEHTDLPELSPVVASLLELVQDQIPGPLEQRLEQLLHQHGL
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PAFLTEIVAPLNHAVGKSWADGKIGVLDEHLYAEQIRMVLGRILNELKPAPAAPRVLLTT
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LPGEQHGIGMLMVACMLRHEGAAPLVAGVQTPLDEIVRGAVGGGCSVVGISCSSYLQRRQ
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHH
ITSQLVRLRSMLPQEIRLWAGGSGVKELTAMPSGIQLFQSLNQISTVLQQLASTQKRP
HHHHHHHHHHHCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKPLTIADIERETGISRDTLRIWERRYGFPEPQRNQRSERNYSQEQLERLRLIKQLTDN
CCCCCCCEECHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
GMRPGKLARLDLQQLQLLLQEHTDLPELSPVVASLLELVQDQIPGPLEQRLEQLLHQHGL
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PAFLTEIVAPLNHAVGKSWADGKIGVLDEHLYAEQIRMVLGRILNELKPAPAAPRVLLTT
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LPGEQHGIGMLMVACMLRHEGAAPLVAGVQTPLDEIVRGAVGGGCSVVGISCSSYLQRRQ
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHH
ITSQLVRLRSMLPQEIRLWAGGSGVKELTAMPSGIQLFQSLNQISTVLQQLASTQKRP
HHHHHHHHHHHCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA