| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424309
Identifier: 189424309
GI number: 189424309
Start: 1293785
End: 1294159
Strand: Reverse
Name: 189424309
Synonym: Glov_1244
Alternate gene names: NA
Gene position: 1294159-1293785 (Counterclockwise)
Preceding gene: 189424314
Following gene: 189424308
Centisome position: 33.03
GC content: 53.33
Gene sequence:
>375_bases ATGACAACCGTCAGCTTTCTGCGAACCTGTAGTATGATACTCCTGCTGGCACTATTCACCGGTTGCTCAGCCATCCCTAC AACCGGACCATCCAATCAGGATCTGCCGCCAGTGCTGGCCCAGGATGAACTCCTGCGCCCGTACGAAAAAATGGGCAGAA TCCAGATCATCCGCGAGGTCTATTTTACTGATTACAGCCTCAGTCCCAGCTTGCAGGAATGGGGGCTCGCAGCGCTACGG GAAGAGGCCCGGAAGATGGGAGCAGACGCACTGATCCTGCCTGAGATTGACAGCCGTCAAATAACCATTGTCATGTTCCC TGCTTTTCCTGCTACAGAGTACCGGGCTGCCGGTGTAGCGATTAAATTCAAATAA
Upstream 100 bases:
>100_bases ACTACCTGTCCAGAGTGAAAATGCTGCTGCTGTGTACTGGACAGTCCGCAAGCATCCTGCTACTCTCAACCAGCAATCCA GACAACGGAGGAACCGGGTC
Downstream 100 bases:
>100_bases CCTTGACAGTCACGCAGGATATTATGTATAAAGTCAATTCTTCAAAGTTGAATCGGCGACGTAGCCAAGTGGTAAGGCAG AGGTCTGCAAAACCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTTVSFLRTCSMILLLALFTGCSAIPTTGPSNQDLPPVLAQDELLRPYEKMGRIQIIREVYFTDYSLSPSLQEWGLAALR EEARKMGADALILPEIDSRQITIVMFPAFPATEYRAAGVAIKFK
Sequences:
>Translated_124_residues MTTVSFLRTCSMILLLALFTGCSAIPTTGPSNQDLPPVLAQDELLRPYEKMGRIQIIREVYFTDYSLSPSLQEWGLAALR EEARKMGADALILPEIDSRQITIVMFPAFPATEYRAAGVAIKFK >Mature_123_residues TTVSFLRTCSMILLLALFTGCSAIPTTGPSNQDLPPVLAQDELLRPYEKMGRIQIIREVYFTDYSLSPSLQEWGLAALRE EARKMGADALILPEIDSRQITIVMFPAFPATEYRAAGVAIKFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13799; Mature: 13668
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVSFLRTCSMILLLALFTGCSAIPTTGPSNQDLPPVLAQDELLRPYEKMGRIQIIREV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHH YFTDYSLSPSLQEWGLAALREEARKMGADALILPEIDSRQITIVMFPAFPATEYRAAGVA HHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEE IKFK EEEC >Mature Secondary Structure TTVSFLRTCSMILLLALFTGCSAIPTTGPSNQDLPPVLAQDELLRPYEKMGRIQIIREV CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHH YFTDYSLSPSLQEWGLAALREEARKMGADALILPEIDSRQITIVMFPAFPATEYRAAGVA HHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEE IKFK EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA