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The map label for this gene is tsr [C]

Identifier: 189424304

GI number: 189424304

Start: 1286420

End: 1288579

Strand: Reverse

Name: tsr [C]

Synonym: Glov_1239

Alternate gene names: 189424304

Gene position: 1288579-1286420 (Counterclockwise)

Preceding gene: 189424305

Following gene: 189424303

Centisome position: 32.89

GC content: 56.71

Gene sequence:

>2160_bases
GTGGAAGGAAGCAACCCCGGTACAACCTGCTCCGGCCTGAAACTACGCACCAGGATGTTTCTGCTGTCAATGGTCTCCTT
TATCGCCATCCTGATTGTTGTGGTATTGGGAGTGATGCTGTTGAATGAAGTCAGGATCAACGGCAGCAACTACAAAACCA
TTCGCAACAGCAAGGATGCCCTTGAAAAGATCGCCCTGCTCAAGTCCGACATATACCAGTTAAACGGTGAGGTGCTGGCC
TTCATGGCCGAACGTGACCGCAACGATGCCCAGGCCCTGCTGGCAAAGATCAAGGACCATACTGACGACATCGACTTCAA
ATACGATGACGTACAGGGCTTGATCGAGTCACAACAAAAGCGTGAAGCCATCATCAAGGCGGAAGCGATCTGGAACGACT
ACAAAAAGACCCTGTTGGAAGAGATCATCCCGTCGGTTCAGCGCAATGACATGGTACGTGCCAACGCTCTGCTGAGTGGC
ATTCAGGAACAACGCTTCAGTTCATTTACCTCCACGGTGGCCCTGATGGTTGACAACCTGCGCCGTGATGTCTATCAGAC
GGAAAAGCAGATCACTGCCATCACCCGCAGCAAAACCATTACAACGGCTGCTGTTATCTTTATTCTGATCACCCTGATTA
CCGTACTTTCCACCTTCATTACCGAGTCGGTCACCCGCCCGATCAAGCGTTGCGTTGATTTTGCCAAGCAGGTGGCAGGC
GGTTCGCTGGAAGACCGGCTGACCATCAAGGCCTGCGGCGAGGTGGGAGATCTGGCTGCCGCCATGAACACCATGGCCGA
AAATCTCCACAACATCATCATCCGCCTGAATGCCTCAACCGGCGAGCTGACCGTAATCGACCGCAACATCGAGACAGCGG
CCCGTCAGGTCGTGGGGGCAACCCGGCTGCAGGAAGATGCCATCAGTGAGACCTCCCGCACGGTTGAGCTGATCAACGGT
TCGGTACATGAGATCTCCGAAGGGGTTGACCAACTTTCCTGTTCGACAACCGAGACATCCTCTTCAATCCTGCAGATGGC
CGCCAGCATTGAGGAGGTCGCACTTAATACCGACAAGCTGGGCGAGTCGGTGGATGAAGTCAGCTCCTCCGTGATCCAGA
TGGCGACCTCCATCAAAGGGATCGGCAACAACATCACCAGCCTGCTGGATGCCTCCACCACCACCGCCTCCTCGGTGGCC
GAGATGGATGCCACCATCCGCCAGGTGGAGAGAAATGCCATGGATACGGCCATTATCTCGGAAACCGTCAAGACCGATGC
CGCCAATGGACTGAAATCGGTACAGGAGACGATTGTCGGCATGCAGGAGATCCGTCGCGCCTCCCGGATCACGGCCGAGG
TGGTGGAGCACCTTTCACTGCGTGCTCACGACATCGGCGCGATCCTGTCGGTGATTGACGAAGTGGCCGAACAGACCAAC
CTGCTGGCCCTGAATGCCGCAATTATCGCTGCCCAGGCTGGCGAACACGGCAAAGGGTTTGCCGTAGTGGCAGATGAGAT
CAAGGAACTGGCCGAGCGCACCTCGACCTCAACCCGTGAAATAGCCCAGGTTATTACCGGCGTCCAGGAAGATACCGGTC
GGGCTGTGGCGGCCATCAATCAGGCAGAACTGGCCATCGGTGCCGGTGAAGAGCTGTCCGAACGCTCCGGCGCTGCGCTT
GAAAAGATCGTGGCCGGTGTCCGTCAGGCTGGTCTGCAGATTGACGCCATTGCCCGGGCCACGGTGGAGCAGGCCAAAGG
CAGCCAGAGCATCCGGGTTGCCATGGAGCAGGTTGAAGAAATGGTGGAACAGATGGCCAACTCTGCCCGGGAGCATAGCC
GGGGCAGTGACCTGATCACCATTGCGGTAGAACGGATGCGGGAGATGACCGGACAGGTTCGCGGTTCCACCAGAGAGCAG
AGCAAGACCAGCGCCCTGATTGCCAAGGCCACTGAAGATATCACCGTCATGATCGACCGGATCCGGGAGGCCTGCGGCGC
CCAGACCGTACACAGCCGCTCCATTGACCGGATGGTTGAAAACATCCGCCAGTCATCTGCCACCACCTCCCAGGCTGCGC
AGGTCATGAACAGTGCCGTTACCGGACTTTCCCATCAGATAGATCAGCTTGAAAAAGAGATGTCAGGATTCAAGATATGA

Upstream 100 bases:

>100_bases
CCCCTCTGAGCGCCCCCTTTTCGCTTGCCCTGATCTGCCCAGCTCTGCTATAGTTCCACGGCTTTTTAAGGCACCTGTCC
CTCGAAAGGAACTGTTCACC

Downstream 100 bases:

>100_bases
AAAGCCGTATTCACAACCGCTTCACCCAATTACACAAGCAGGGCGGCAAGGCCCTGGTCACCTTTATCACCGCCGGGGAC
CCCGATCTGGCCACCACAGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MEGSNPGTTCSGLKLRTRMFLLSMVSFIAILIVVVLGVMLLNEVRINGSNYKTIRNSKDALEKIALLKSDIYQLNGEVLA
FMAERDRNDAQALLAKIKDHTDDIDFKYDDVQGLIESQQKREAIIKAEAIWNDYKKTLLEEIIPSVQRNDMVRANALLSG
IQEQRFSSFTSTVALMVDNLRRDVYQTEKQITAITRSKTITTAAVIFILITLITVLSTFITESVTRPIKRCVDFAKQVAG
GSLEDRLTIKACGEVGDLAAAMNTMAENLHNIIIRLNASTGELTVIDRNIETAARQVVGATRLQEDAISETSRTVELING
SVHEISEGVDQLSCSTTETSSSILQMAASIEEVALNTDKLGESVDEVSSSVIQMATSIKGIGNNITSLLDASTTTASSVA
EMDATIRQVERNAMDTAIISETVKTDAANGLKSVQETIVGMQEIRRASRITAEVVEHLSLRAHDIGAILSVIDEVAEQTN
LLALNAAIIAAQAGEHGKGFAVVADEIKELAERTSTSTREIAQVITGVQEDTGRAVAAINQAELAIGAGEELSERSGAAL
EKIVAGVRQAGLQIDAIARATVEQAKGSQSIRVAMEQVEEMVEQMANSAREHSRGSDLITIAVERMREMTGQVRGSTREQ
SKTSALIAKATEDITVMIDRIREACGAQTVHSRSIDRMVENIRQSSATTSQAAQVMNSAVTGLSHQIDQLEKEMSGFKI

Sequences:

>Translated_719_residues
MEGSNPGTTCSGLKLRTRMFLLSMVSFIAILIVVVLGVMLLNEVRINGSNYKTIRNSKDALEKIALLKSDIYQLNGEVLA
FMAERDRNDAQALLAKIKDHTDDIDFKYDDVQGLIESQQKREAIIKAEAIWNDYKKTLLEEIIPSVQRNDMVRANALLSG
IQEQRFSSFTSTVALMVDNLRRDVYQTEKQITAITRSKTITTAAVIFILITLITVLSTFITESVTRPIKRCVDFAKQVAG
GSLEDRLTIKACGEVGDLAAAMNTMAENLHNIIIRLNASTGELTVIDRNIETAARQVVGATRLQEDAISETSRTVELING
SVHEISEGVDQLSCSTTETSSSILQMAASIEEVALNTDKLGESVDEVSSSVIQMATSIKGIGNNITSLLDASTTTASSVA
EMDATIRQVERNAMDTAIISETVKTDAANGLKSVQETIVGMQEIRRASRITAEVVEHLSLRAHDIGAILSVIDEVAEQTN
LLALNAAIIAAQAGEHGKGFAVVADEIKELAERTSTSTREIAQVITGVQEDTGRAVAAINQAELAIGAGEELSERSGAAL
EKIVAGVRQAGLQIDAIARATVEQAKGSQSIRVAMEQVEEMVEQMANSAREHSRGSDLITIAVERMREMTGQVRGSTREQ
SKTSALIAKATEDITVMIDRIREACGAQTVHSRSIDRMVENIRQSSATTSQAAQVMNSAVTGLSHQIDQLEKEMSGFKI
>Mature_719_residues
MEGSNPGTTCSGLKLRTRMFLLSMVSFIAILIVVVLGVMLLNEVRINGSNYKTIRNSKDALEKIALLKSDIYQLNGEVLA
FMAERDRNDAQALLAKIKDHTDDIDFKYDDVQGLIESQQKREAIIKAEAIWNDYKKTLLEEIIPSVQRNDMVRANALLSG
IQEQRFSSFTSTVALMVDNLRRDVYQTEKQITAITRSKTITTAAVIFILITLITVLSTFITESVTRPIKRCVDFAKQVAG
GSLEDRLTIKACGEVGDLAAAMNTMAENLHNIIIRLNASTGELTVIDRNIETAARQVVGATRLQEDAISETSRTVELING
SVHEISEGVDQLSCSTTETSSSILQMAASIEEVALNTDKLGESVDEVSSSVIQMATSIKGIGNNITSLLDASTTTASSVA
EMDATIRQVERNAMDTAIISETVKTDAANGLKSVQETIVGMQEIRRASRITAEVVEHLSLRAHDIGAILSVIDEVAEQTN
LLALNAAIIAAQAGEHGKGFAVVADEIKELAERTSTSTREIAQVITGVQEDTGRAVAAINQAELAIGAGEELSERSGAAL
EKIVAGVRQAGLQIDAIARATVEQAKGSQSIRVAMEQVEEMVEQMANSAREHSRGSDLITIAVERMREMTGQVRGSTREQ
SKTSALIAKATEDITVMIDRIREACGAQTVHSRSIDRMVENIRQSSATTSQAAQVMNSAVTGLSHQIDQLEKEMSGFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=603, Percent_Identity=23.3830845771144, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1788195, Length=213, Percent_Identity=32.8638497652582, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1788194, Length=213, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789453, Length=164, Percent_Identity=32.9268292682927, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1787690, Length=132, Percent_Identity=35.6060606060606, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 77842; Mature: 77842

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGSNPGTTCSGLKLRTRMFLLSMVSFIAILIVVVLGVMLLNEVRINGSNYKTIRNSKDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHH
LEKIALLKSDIYQLNGEVLAFMAERDRNDAQALLAKIKDHTDDIDFKYDDVQGLIESQQK
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
REAIIKAEAIWNDYKKTLLEEIIPSVQRNDMVRANALLSGIQEQRFSSFTSTVALMVDNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDVYQTEKQITAITRSKTITTAAVIFILITLITVLSTFITESVTRPIKRCVDFAKQVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSLEDRLTIKACGEVGDLAAAMNTMAENLHNIIIRLNASTGELTVIDRNIETAARQVVGA
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCHHHHHHHHHHH
TRLQEDAISETSRTVELINGSVHEISEGVDQLSCSTTETSSSILQMAASIEEVALNTDKL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHH
GESVDEVSSSVIQMATSIKGIGNNITSLLDASTTTASSVAEMDATIRQVERNAMDTAIIS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVKTDAANGLKSVQETIVGMQEIRRASRITAEVVEHLSLRAHDIGAILSVIDEVAEQTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LLALNAAIIAAQAGEHGKGFAVVADEIKELAERTSTSTREIAQVITGVQEDTGRAVAAIN
EEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCHHHHCC
QAELAIGAGEELSERSGAALEKIVAGVRQAGLQIDAIARATVEQAKGSQSIRVAMEQVEE
HHHHEECCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MVEQMANSAREHSRGSDLITIAVERMREMTGQVRGSTREQSKTSALIAKATEDITVMIDR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IREACGAQTVHSRSIDRMVENIRQSSATTSQAAQVMNSAVTGLSHQIDQLEKEMSGFKI
HHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEGSNPGTTCSGLKLRTRMFLLSMVSFIAILIVVVLGVMLLNEVRINGSNYKTIRNSKDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHH
LEKIALLKSDIYQLNGEVLAFMAERDRNDAQALLAKIKDHTDDIDFKYDDVQGLIESQQK
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
REAIIKAEAIWNDYKKTLLEEIIPSVQRNDMVRANALLSGIQEQRFSSFTSTVALMVDNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDVYQTEKQITAITRSKTITTAAVIFILITLITVLSTFITESVTRPIKRCVDFAKQVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSLEDRLTIKACGEVGDLAAAMNTMAENLHNIIIRLNASTGELTVIDRNIETAARQVVGA
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCHHHHHHHHHHH
TRLQEDAISETSRTVELINGSVHEISEGVDQLSCSTTETSSSILQMAASIEEVALNTDKL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHH
GESVDEVSSSVIQMATSIKGIGNNITSLLDASTTTASSVAEMDATIRQVERNAMDTAIIS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVKTDAANGLKSVQETIVGMQEIRRASRITAEVVEHLSLRAHDIGAILSVIDEVAEQTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LLALNAAIIAAQAGEHGKGFAVVADEIKELAERTSTSTREIAQVITGVQEDTGRAVAAIN
EEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCHHHHCC
QAELAIGAGEELSERSGAALEKIVAGVRQAGLQIDAIARATVEQAKGSQSIRVAMEQVEE
HHHHEECCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MVEQMANSAREHSRGSDLITIAVERMREMTGQVRGSTREQSKTSALIAKATEDITVMIDR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IREACGAQTVHSRSIDRMVENIRQSSATTSQAAQVMNSAVTGLSHQIDQLEKEMSGFKI
HHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA