| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424259
Identifier: 189424259
GI number: 189424259
Start: 1241040
End: 1241834
Strand: Reverse
Name: 189424259
Synonym: Glov_1194
Alternate gene names: NA
Gene position: 1241834-1241040 (Counterclockwise)
Preceding gene: 189424260
Following gene: 189424240
Centisome position: 31.7
GC content: 59.87
Gene sequence:
>795_bases TTGGGCCTTCGTGCTTCCGTTCTGACAACGGTTCTGCTTCTGATCTGGCTCTGTTCAGCTCAGGCGGCTCCCCGCGACCT CTGCCTGGACTGCCACCCGGCACACTATACGGAACAGGGCAGTTGCCGGTACTGTCATCGGGGCAACCCGCAGACCAGCC GGAAAGAACTGGCCCATGGCAACCTGATTAAAGGTCAGCAGGCCAGCTTTACCAATCCCCGATCAGCAAGCCTTGTGGCC GGGAAAAAACTGGCTGATCAGACCGCCTGCCGTCGCTGCCATACCCTGGCAGGCACAGGCAACCGTTTGGCATCAAACCT GGACAGCCTGCTCTGGACCACCAAACCGGAGCTGATCCGTAAGGCCCTGGTGGAACCGGCCCAGCAGATGCCTGATTTTC ATTTTTCACCACCGGATCTTGATCGTTTGATCACCGCCATCCTGGCGGGGGGGCTGCAAGCTGGCAAGGCCACCCGGGAA CCTCCGCTGCTGGTCCATTTCAGCAACCTGCAGACAGGCCAGCAAACGTTCTTTACCAGACAATGCGGCGGTTGCCACAA ACTGCTTTCAAAACGGGACGGTGGACTGGGACGGGGCATTGCCGGCCCCAACCTGTCCGGCCTATTGACCAGGTTTTATC CCCCCACCTTCGAAAACGGCAGCAGCTGGAGTGAAGAACGGCTGAAGCGCTGGCTGAAGAACCCGCGGGCCATCAGGCCT CAGACGCTGATGCGCCCGGTACCACTCAACGATGAGGAGTGGCGGCAGCTCCTGCAATCCCTGGCTGTTGACTAA
Upstream 100 bases:
>100_bases GGTTCGGCCCCCGGCATCGCCTGGCTGCCGTTACCGCACTGCTGCTGTTTCTGGGAATACTTGTTCTGACGCTGATCGGA CTGTTTTTCAGGGGGGAAAA
Downstream 100 bases:
>100_bases CTAGGTGGTTTCGTCAAGCACCTGCTTGACCTCGCGGGCGCATCATCTACCCCGTGGGGACAGCTCCTTGCAGCGCCCCA GGGTGCAGGCGCCGGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MGLRASVLTTVLLLIWLCSAQAAPRDLCLDCHPAHYTEQGSCRYCHRGNPQTSRKELAHGNLIKGQQASFTNPRSASLVA GKKLADQTACRRCHTLAGTGNRLASNLDSLLWTTKPELIRKALVEPAQQMPDFHFSPPDLDRLITAILAGGLQAGKATRE PPLLVHFSNLQTGQQTFFTRQCGGCHKLLSKRDGGLGRGIAGPNLSGLLTRFYPPTFENGSSWSEERLKRWLKNPRAIRP QTLMRPVPLNDEEWRQLLQSLAVD
Sequences:
>Translated_264_residues MGLRASVLTTVLLLIWLCSAQAAPRDLCLDCHPAHYTEQGSCRYCHRGNPQTSRKELAHGNLIKGQQASFTNPRSASLVA GKKLADQTACRRCHTLAGTGNRLASNLDSLLWTTKPELIRKALVEPAQQMPDFHFSPPDLDRLITAILAGGLQAGKATRE PPLLVHFSNLQTGQQTFFTRQCGGCHKLLSKRDGGLGRGIAGPNLSGLLTRFYPPTFENGSSWSEERLKRWLKNPRAIRP QTLMRPVPLNDEEWRQLLQSLAVD >Mature_263_residues GLRASVLTTVLLLIWLCSAQAAPRDLCLDCHPAHYTEQGSCRYCHRGNPQTSRKELAHGNLIKGQQASFTNPRSASLVAG KKLADQTACRRCHTLAGTGNRLASNLDSLLWTTKPELIRKALVEPAQQMPDFHFSPPDLDRLITAILAGGLQAGKATREP PLLVHFSNLQTGQQTFFTRQCGGCHKLLSKRDGGLGRGIAGPNLSGLLTRFYPPTFENGSSWSEERLKRWLKNPRAIRPQ TLMRPVPLNDEEWRQLLQSLAVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29224; Mature: 29093
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRASVLTTVLLLIWLCSAQAAPRDLCLDCHPAHYTEQGSCRYCHRGNPQTSRKELAHG CCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCC NLIKGQQASFTNPRSASLVAGKKLADQTACRRCHTLAGTGNRLASNLDSLLWTTKPELIR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH KALVEPAQQMPDFHFSPPDLDRLITAILAGGLQAGKATREPPLLVHFSNLQTGQQTFFTR HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCCCHHHHHHHH QCGGCHKLLSKRDGGLGRGIAGPNLSGLLTRFYPPTFENGSSWSEERLKRWLKNPRAIRP HCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCH QTLMRPVPLNDEEWRQLLQSLAVD HHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GLRASVLTTVLLLIWLCSAQAAPRDLCLDCHPAHYTEQGSCRYCHRGNPQTSRKELAHG CCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCC NLIKGQQASFTNPRSASLVAGKKLADQTACRRCHTLAGTGNRLASNLDSLLWTTKPELIR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH KALVEPAQQMPDFHFSPPDLDRLITAILAGGLQAGKATREPPLLVHFSNLQTGQQTFFTR HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCCCHHHHHHHH QCGGCHKLLSKRDGGLGRGIAGPNLSGLLTRFYPPTFENGSSWSEERLKRWLKNPRAIRP HCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCH QTLMRPVPLNDEEWRQLLQSLAVD HHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA