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The map label for this gene is 189424240

Identifier: 189424240

GI number: 189424240

Start: 1227474

End: 1228943

Strand: Reverse

Name: 189424240

Synonym: Glov_1175

Alternate gene names: NA

Gene position: 1228943-1227474 (Counterclockwise)

Preceding gene: 189424259

Following gene: 189424239

Centisome position: 31.37

GC content: 53.13

Gene sequence:

>1470_bases
ATGAGCAAGAAAAGCAGCAAGCGGAATCTGCAGTATTGCGCTGTTGCACTGGCAGCCACCATGCTGTGCGCGGGGGCTGC
CCAGGCAGGACCGCGAATCGAGTTTGGCGATGATGGCGGTTTTGTACAGATTGATCTGAAGGGGCAGTTTTATCTGGAAA
ATACCAGTTTAGGTGGTGGAAACGACGGCAAGGAAAACAGGACTGACCTGCACTTCATGCGTAACCGCCTGGGTCTGACC
GGCATGCTGGATGAGACCTGGGGCTACAAGTTCCAGACCTGCGGTAACACCGGCACCACCAAAAACCCGTTCATGTACAC
GCTTTCACAGCAGGATACCGACTGGAACGACCGTGATATACGGATCATTGACGCCTACGCCATTGCAAATTTCAACGAGC
ATATCAACCTGAAGGTCGGTCTGACCAAGATTCCTTTAAGCCGTGCCAATCTGGATGACTGTTTCGCACCGCTGTCACAG
GACCGCTCCATGTTTGTCTACTCAGCTTACGGATCCTCACCGGCCAAATTCAGCCGTGACCTGGGTGGCGTGGCAGTGGG
ACGTTTCTTTAATGACCGACTGACCTATTTTGCCGGTATCTTTCAGGGACGAGAAGGGACCAGCCAAACGGCTATTCCCT
ATGCCCCCAACTATCCGAACGGCGCCCCGAACAAAATCATGGGGGCTCCTGCCACTACCAGTACAGCCCCAAAAACCAAT
CTTGAATATGTCGCGCGCCTGACCTTTGACTTCCTCGAATCAGAAGGCGGTTCCGGTTATCAAGGCACCTATTTCGGAGA
GAAAAAAATCCTCAACATCGGCGTCGGCGGCGCGTTTCAGCCTCAGGCAGCCTACAAAAATACCCAGAACGTCTACTGGC
TGTCAGACGGCACTTCCTCCACCACGGCCCCAGGACCTGCAACGACATCCTCGGTAACCAAAGTAACAACAATGGCCAAC
ACCAGCAAAGGTACGGTTGATTACAGTGCAATTGCGGTTGACGGCATGTTTGAATACCCGACCGCTTTTGGTGTCCCCAC
GATTACCGCACAATATCTGAAAGTAGATTTTGAAGATGCCTATCTGACAGCCTCATCCGGTGATAAACTGGCAGTGGTTT
CCGGCATGAACGGCCAGAAGGAAGGTTTCTACACCAAGGTTGCCCATATCCTGCCGTTCAAGATCGGCGGTATGGGCAAG
CTGCAACCCTACGCTCTGTATGAAAACTGGCGTTTTGCCCACCTGTTGGGGGTTGACGGTCAACGGATTGAGCAGATCGG
TGGTGGCCTCAACTACTACATCACCGGCGACCAGCGGGTCCGTCTGACCGCTGAATATCTGAAAACAGACTTCTCCAAGA
AAATGGCGTTTGTGGTACCGGGTGCCAGTACGCCCGGTGTTGCCTCAGGCTACGTTAAAGACGTCAACTCGTTCGACACT
TTCCGTATGATGCTGCAGGTGGTATTCTAG

Upstream 100 bases:

>100_bases
ACCTGCCTGTTCGGATATAGACAATATAAATCGTCTGCAATAGCCACTGGACAAGGAATGAGCCAGGTCTGGGGGCAACA
ACTTCCCTAAGGAGGAAACC

Downstream 100 bases:

>100_bases
GGCACCTCACGGCTGCCGGGGCACCTCGGCAGCCAACCAACAGCCAAGGAGTAACACCTATGAAAAAGTGGAATCTTATT
ACCGCTGCACTACTCACCCT

Product: porin

Products: NA

Alternate protein names: Outer Membrane Porin FmdC

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MSKKSSKRNLQYCAVALAATMLCAGAAQAGPRIEFGDDGGFVQIDLKGQFYLENTSLGGGNDGKENRTDLHFMRNRLGLT
GMLDETWGYKFQTCGNTGTTKNPFMYTLSQQDTDWNDRDIRIIDAYAIANFNEHINLKVGLTKIPLSRANLDDCFAPLSQ
DRSMFVYSAYGSSPAKFSRDLGGVAVGRFFNDRLTYFAGIFQGREGTSQTAIPYAPNYPNGAPNKIMGAPATTSTAPKTN
LEYVARLTFDFLESEGGSGYQGTYFGEKKILNIGVGGAFQPQAAYKNTQNVYWLSDGTSSTTAPGPATTSSVTKVTTMAN
TSKGTVDYSAIAVDGMFEYPTAFGVPTITAQYLKVDFEDAYLTASSGDKLAVVSGMNGQKEGFYTKVAHILPFKIGGMGK
LQPYALYENWRFAHLLGVDGQRIEQIGGGLNYYITGDQRVRLTAEYLKTDFSKKMAFVVPGASTPGVASGYVKDVNSFDT
FRMMLQVVF

Sequences:

>Translated_489_residues
MSKKSSKRNLQYCAVALAATMLCAGAAQAGPRIEFGDDGGFVQIDLKGQFYLENTSLGGGNDGKENRTDLHFMRNRLGLT
GMLDETWGYKFQTCGNTGTTKNPFMYTLSQQDTDWNDRDIRIIDAYAIANFNEHINLKVGLTKIPLSRANLDDCFAPLSQ
DRSMFVYSAYGSSPAKFSRDLGGVAVGRFFNDRLTYFAGIFQGREGTSQTAIPYAPNYPNGAPNKIMGAPATTSTAPKTN
LEYVARLTFDFLESEGGSGYQGTYFGEKKILNIGVGGAFQPQAAYKNTQNVYWLSDGTSSTTAPGPATTSSVTKVTTMAN
TSKGTVDYSAIAVDGMFEYPTAFGVPTITAQYLKVDFEDAYLTASSGDKLAVVSGMNGQKEGFYTKVAHILPFKIGGMGK
LQPYALYENWRFAHLLGVDGQRIEQIGGGLNYYITGDQRVRLTAEYLKTDFSKKMAFVVPGASTPGVASGYVKDVNSFDT
FRMMLQVVF
>Mature_488_residues
SKKSSKRNLQYCAVALAATMLCAGAAQAGPRIEFGDDGGFVQIDLKGQFYLENTSLGGGNDGKENRTDLHFMRNRLGLTG
MLDETWGYKFQTCGNTGTTKNPFMYTLSQQDTDWNDRDIRIIDAYAIANFNEHINLKVGLTKIPLSRANLDDCFAPLSQD
RSMFVYSAYGSSPAKFSRDLGGVAVGRFFNDRLTYFAGIFQGREGTSQTAIPYAPNYPNGAPNKIMGAPATTSTAPKTNL
EYVARLTFDFLESEGGSGYQGTYFGEKKILNIGVGGAFQPQAAYKNTQNVYWLSDGTSSTTAPGPATTSSVTKVTTMANT
SKGTVDYSAIAVDGMFEYPTAFGVPTITAQYLKVDFEDAYLTASSGDKLAVVSGMNGQKEGFYTKVAHILPFKIGGMGKL
QPYALYENWRFAHLLGVDGQRIEQIGGGLNYYITGDQRVRLTAEYLKTDFSKKMAFVVPGASTPGVASGYVKDVNSFDTF
RMMLQVVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53242; Mature: 53110

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKSSKRNLQYCAVALAATMLCAGAAQAGPRIEFGDDGGFVQIDLKGQFYLENTSLGGG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCC
NDGKENRTDLHFMRNRLGLTGMLDETWGYKFQTCGNTGTTKNPFMYTLSQQDTDWNDRDI
CCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCE
RIIDAYAIANFNEHINLKVGLTKIPLSRANLDDCFAPLSQDRSMFVYSAYGSSPAKFSRD
EEEEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHC
LGGVAVGRFFNDRLTYFAGIFQGREGTSQTAIPYAPNYPNGAPNKIMGAPATTSTAPKTN
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
LEYVARLTFDFLESEGGSGYQGTYFGEKKILNIGVGGAFQPQAAYKNTQNVYWLSDGTSS
HHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCHHHHCCCCEEEEEECCCCC
TTAPGPATTSSVTKVTTMANTSKGTVDYSAIAVDGMFEYPTAFGVPTITAQYLKVDFEDA
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEECCCCCCCCCEEEEEEEEEECCE
YLTASSGDKLAVVSGMNGQKEGFYTKVAHILPFKIGGMGKLQPYALYENWRFAHLLGVDG
EEEECCCCEEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCCCEEEECCCEEEEEECCCH
QRIEQIGGGLNYYITGDQRVRLTAEYLKTDFSKKMAFVVPGASTPGVASGYVKDVNSFDT
HHHHHHCCCEEEEEECCCEEEEEHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCCHHH
FRMMLQVVF
HHHHHHHCC
>Mature Secondary Structure 
SKKSSKRNLQYCAVALAATMLCAGAAQAGPRIEFGDDGGFVQIDLKGQFYLENTSLGGG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCC
NDGKENRTDLHFMRNRLGLTGMLDETWGYKFQTCGNTGTTKNPFMYTLSQQDTDWNDRDI
CCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCE
RIIDAYAIANFNEHINLKVGLTKIPLSRANLDDCFAPLSQDRSMFVYSAYGSSPAKFSRD
EEEEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHC
LGGVAVGRFFNDRLTYFAGIFQGREGTSQTAIPYAPNYPNGAPNKIMGAPATTSTAPKTN
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
LEYVARLTFDFLESEGGSGYQGTYFGEKKILNIGVGGAFQPQAAYKNTQNVYWLSDGTSS
HHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCHHHHCCCCEEEEEECCCCC
TTAPGPATTSSVTKVTTMANTSKGTVDYSAIAVDGMFEYPTAFGVPTITAQYLKVDFEDA
CCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEECCCCCCCCCEEEEEEEEEECCE
YLTASSGDKLAVVSGMNGQKEGFYTKVAHILPFKIGGMGKLQPYALYENWRFAHLLGVDG
EEEECCCCEEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCCCEEEECCCEEEEEECCCH
QRIEQIGGGLNYYITGDQRVRLTAEYLKTDFSKKMAFVVPGASTPGVASGYVKDVNSFDT
HHHHHHCCCEEEEEECCCEEEEEHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCCHHH
FRMMLQVVF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA