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The map label for this gene is psrC [H]

Identifier: 189424227

GI number: 189424227

Start: 1215638

End: 1216609

Strand: Reverse

Name: psrC [H]

Synonym: Glov_1162

Alternate gene names: 189424227

Gene position: 1216609-1215638 (Counterclockwise)

Preceding gene: 189424228

Following gene: 189424226

Centisome position: 31.05

GC content: 54.42

Gene sequence:

>972_bases
ATGGAACTGACTATTACCGGCGCCAACGCCATGACCAATCCGGTCCTGCATATCTGGGACTGGCGTGTTTCGCTCTACCT
GTTTCTGGGCGGCCTTTCTGCAGGCCTGGCGGTGATGAGCTCACTGATGCACCTTCAGAAAAAGGAAGACCGTATTCCGG
CGGGTGAAACCGTCTTCATGGTAGCCCCCTGGCTGGTACCGGTCATTTTGGGGATCGGTATGTTCTTTATCTTTCTGGAC
CTGGACCGCAAGCTGAATGTGTTCTGGTTCTACCTGACGATACAGCCGCTCTCCCCCATGTCCTGGGGTTCCTGGGGGCT
GCTGCTGTTCACCCCGATCAGCCTGTTGTTCGCCTACGGCACCCTGCCGGAACAGCGCAGAGAGTGGTTGTACCGCCTGC
CGTTCATGGATGATCTGGCCACCTGGGTAAAGCCACGCATGCAGTATCTTGCACTGGCCAATGCTGCAATGGGGGTCTTC
ATCGGCATCTACACCGGTGTGCTCTTGAGCGCCTTTGTGGCCCGCCCACTCTGGAACACCGCCATCCTGCCGATGCTGTT
CCTCTGTTCAGCCATGTCAGCAGGGGCAGCCCTGATGATCGTGCTGGCCAAGGATCAGTGTGTAAAACTGTTTTACACAA
AGGTCGACATCGGCCTGATCATTGCCGAGATGATCATCATCCCGCTATTTTTCTACGGTCAGTATGTTTCCTCTGAATCA
CAGCGGCTTTCGATCATGCCGTTCTTCAGCTTAAACCATGAATATCTCTGGTATACCGCCTCACTCTTGTTTATCGGCGT
CATCTTCCCTCTGGCATTGGTGATGAAACTGGCCGAGATCAAGGAGTGCCATGAAACACTTTGCAGCAGCGACATCCTCA
AGATGAATCTGAGCGCCGGACTGGTCTTGCTGGGAAGTCTGGTGATCCGTCTAACCTTTGTCTACGCCGGACAGATCAGC
AAACTGGTCTGA

Upstream 100 bases:

>100_bases
CCTGAAGGGGCACCATGCCGAACTGCCGATGAAAAGCGCCGGCACCGAGCCACGGGTCTATTACATCCGCCGGTTTGGCA
CGGAATAGGGGGGAGCATCT

Downstream 100 bases:

>100_bases
CAATCTACTTTTCACTGCCCATCGGGCACTATCCTGAAGGAGGTAACATAATGAAATTGAAAATCTTTGCACTGGCCCTG
ATCACTCTGTTCAGCATGAA

Product: polysulfide reductase NrfD

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Sulfur reductase chain C [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MELTITGANAMTNPVLHIWDWRVSLYLFLGGLSAGLAVMSSLMHLQKKEDRIPAGETVFMVAPWLVPVILGIGMFFIFLD
LDRKLNVFWFYLTIQPLSPMSWGSWGLLLFTPISLLFAYGTLPEQRREWLYRLPFMDDLATWVKPRMQYLALANAAMGVF
IGIYTGVLLSAFVARPLWNTAILPMLFLCSAMSAGAALMIVLAKDQCVKLFYTKVDIGLIIAEMIIIPLFFYGQYVSSES
QRLSIMPFFSLNHEYLWYTASLLFIGVIFPLALVMKLAEIKECHETLCSSDILKMNLSAGLVLLGSLVIRLTFVYAGQIS
KLV

Sequences:

>Translated_323_residues
MELTITGANAMTNPVLHIWDWRVSLYLFLGGLSAGLAVMSSLMHLQKKEDRIPAGETVFMVAPWLVPVILGIGMFFIFLD
LDRKLNVFWFYLTIQPLSPMSWGSWGLLLFTPISLLFAYGTLPEQRREWLYRLPFMDDLATWVKPRMQYLALANAAMGVF
IGIYTGVLLSAFVARPLWNTAILPMLFLCSAMSAGAALMIVLAKDQCVKLFYTKVDIGLIIAEMIIIPLFFYGQYVSSES
QRLSIMPFFSLNHEYLWYTASLLFIGVIFPLALVMKLAEIKECHETLCSSDILKMNLSAGLVLLGSLVIRLTFVYAGQIS
KLV
>Mature_323_residues
MELTITGANAMTNPVLHIWDWRVSLYLFLGGLSAGLAVMSSLMHLQKKEDRIPAGETVFMVAPWLVPVILGIGMFFIFLD
LDRKLNVFWFYLTIQPLSPMSWGSWGLLLFTPISLLFAYGTLPEQRREWLYRLPFMDDLATWVKPRMQYLALANAAMGVF
IGIYTGVLLSAFVARPLWNTAILPMLFLCSAMSAGAALMIVLAKDQCVKLFYTKVDIGLIIAEMIIIPLFFYGQYVSSES
QRLSIMPFFSLNHEYLWYTASLLFIGVIFPLALVMKLAEIKECHETLCSSDILKMNLSAGLVLLGSLVIRLTFVYAGQIS
KLV

Specific function: Component of the phosphorylative electron transport system with polysulfide as the terminal acceptor [H]

COG id: COG3301

COG function: function code P; Formate-dependent nitrite reductase, membrane component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrfD family [H]

Homologues:

Organism=Escherichia coli, GI1790509, Length=316, Percent_Identity=25.3164556962025, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005614 [H]

Pfam domain/function: PF03916 NrfD [H]

EC number: NA

Molecular weight: Translated: 36383; Mature: 36383

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTITGANAMTNPVLHIWDWRVSLYLFLGGLSAGLAVMSSLMHLQKKEDRIPAGETVFM
CEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VAPWLVPVILGIGMFFIFLDLDRKLNVFWFYLTIQPLSPMSWGSWGLLLFTPISLLFAYG
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
TLPEQRREWLYRLPFMDDLATWVKPRMQYLALANAAMGVFIGIYTGVLLSAFVARPLWNT
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILPMLFLCSAMSAGAALMIVLAKDQCVKLFYTKVDIGLIIAEMIIIPLFFYGQYVSSES
HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QRLSIMPFFSLNHEYLWYTASLLFIGVIFPLALVMKLAEIKECHETLCSSDILKMNLSAG
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHH
LVLLGSLVIRLTFVYAGQISKLV
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELTITGANAMTNPVLHIWDWRVSLYLFLGGLSAGLAVMSSLMHLQKKEDRIPAGETVFM
CEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VAPWLVPVILGIGMFFIFLDLDRKLNVFWFYLTIQPLSPMSWGSWGLLLFTPISLLFAYG
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
TLPEQRREWLYRLPFMDDLATWVKPRMQYLALANAAMGVFIGIYTGVLLSAFVARPLWNT
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILPMLFLCSAMSAGAALMIVLAKDQCVKLFYTKVDIGLIIAEMIIIPLFFYGQYVSSES
HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QRLSIMPFFSLNHEYLWYTASLLFIGVIFPLALVMKLAEIKECHETLCSSDILKMNLSAG
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHH
LVLLGSLVIRLTFVYAGQISKLV
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597189; 14500908 [H]