| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424211
Identifier: 189424211
GI number: 189424211
Start: 1197896
End: 1198819
Strand: Reverse
Name: 189424211
Synonym: Glov_1146
Alternate gene names: NA
Gene position: 1198819-1197896 (Counterclockwise)
Preceding gene: 189424212
Following gene: 189424210
Centisome position: 30.6
GC content: 57.03
Gene sequence:
>924_bases ATGTCTAGCAGTGCAAAAAAACAGGTGCCTGTCGGCAGCCGGGATGATCTGCAGATCGACCCTTCCCGCTGTCTGCGAAC ACGCTTCAGTGAGAGCGTCTGCAACCATTGTCAAGCAATCTGCCCTGCTGCAGCCCTGTCGCTGGAAGACGGACTGGTCA TCAATCAGGAACAGTGTAGTGGCTGCCTGCTCTGCACCACCGTCTGCCCCTCCGGCGCACTTGAACAACAGGCAGACTTT CAGGCCATCATCCTGCAACTCAGAAAAGTCCCGAAACCGGTTCTGGGCTGTTGCCGTAGCAAAGAACAGGCACATGCCTG GCTATCCTGTCTGGGGGGGCTTGCAGAGGAACACCTGCTGACACTGAGCCAGCGGTTAAGCGGCGCTCTGACCCTGAATC TGATTCACTGTGATGACTGCCCCAACAGCGCCATACTGCCGTTGCTGAAGGAACGGCTGCAGCGGATGACGGCCAGCGGA CTGACCGCAGGTGGCTGCAACCTTGTCACGGCAACGTCTCAGGTAGAACTGCAGTACCAGCCTGAAACCGTTGACCGACG CAGCTTTTTCACGTCATTCCGCAACTCGCTGTTTCAGGCCGCAGCAGACGTCATGCAGACCAGCGCAAAACCGGTGGAAC GCAGCAGCAGCTATGGAGACAAACGAATACCGCAAAGAAGAGAACTACTGAACCAAACACGCAGTTCACTGCCTGAAGAG CAACAGGCGACAGCAGCAAAACAGTTTGATCACAGCATCAGGTTCAACACAGCCTGCAGCGCCTGTCAGGGCTGTGTCGC CATCTGTCCCACCGGCGCCCTGGTCAGCAACGTACAGGAAGAACACCCTGAGTTTGTGCAGGAACGCTGCACCGGCTGCG GTCTGTGTGTGGAGTTCTGCCTGGATCAGGCGATCAGACTGTAA
Upstream 100 bases:
>100_bases ACGATCATTGAAGACGCTGAGGCCCCGTTTTATCAGGCGATTGCCCGCTGTACCGCCGCGTTTGTCACCGCTGATGCCCG TAACCTGAACGCAGCCGCCC
Downstream 100 bases:
>100_bases ATACCAGCTACTGCCTGCTACGGCAGGCCGCAATCAGTTCCGGTACAGTAGGGTAGCGCATCTGCTCCAGCCGGGAGAAG ATCTGCTCACCATTCACCAG
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: Ferredoxin-Like Protein
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSSSAKKQVPVGSRDDLQIDPSRCLRTRFSESVCNHCQAICPAAALSLEDGLVINQEQCSGCLLCTTVCPSGALEQQADF QAIILQLRKVPKPVLGCCRSKEQAHAWLSCLGGLAEEHLLTLSQRLSGALTLNLIHCDDCPNSAILPLLKERLQRMTASG LTAGGCNLVTATSQVELQYQPETVDRRSFFTSFRNSLFQAAADVMQTSAKPVERSSSYGDKRIPQRRELLNQTRSSLPEE QQATAAKQFDHSIRFNTACSACQGCVAICPTGALVSNVQEEHPEFVQERCTGCGLCVEFCLDQAIRL
Sequences:
>Translated_307_residues MSSSAKKQVPVGSRDDLQIDPSRCLRTRFSESVCNHCQAICPAAALSLEDGLVINQEQCSGCLLCTTVCPSGALEQQADF QAIILQLRKVPKPVLGCCRSKEQAHAWLSCLGGLAEEHLLTLSQRLSGALTLNLIHCDDCPNSAILPLLKERLQRMTASG LTAGGCNLVTATSQVELQYQPETVDRRSFFTSFRNSLFQAAADVMQTSAKPVERSSSYGDKRIPQRRELLNQTRSSLPEE QQATAAKQFDHSIRFNTACSACQGCVAICPTGALVSNVQEEHPEFVQERCTGCGLCVEFCLDQAIRL >Mature_306_residues SSSAKKQVPVGSRDDLQIDPSRCLRTRFSESVCNHCQAICPAAALSLEDGLVINQEQCSGCLLCTTVCPSGALEQQADFQ AIILQLRKVPKPVLGCCRSKEQAHAWLSCLGGLAEEHLLTLSQRLSGALTLNLIHCDDCPNSAILPLLKERLQRMTASGL TAGGCNLVTATSQVELQYQPETVDRRSFFTSFRNSLFQAAADVMQTSAKPVERSSSYGDKRIPQRRELLNQTRSSLPEEQ QATAAKQFDHSIRFNTACSACQGCVAICPTGALVSNVQEEHPEFVQERCTGCGLCVEFCLDQAIRL
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33469; Mature: 33337
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSAKKQVPVGSRDDLQIDPSRCLRTRFSESVCNHCQAICPAAALSLEDGLVINQEQCS CCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCC GCLLCTTVCPSGALEQQADFQAIILQLRKVPKPVLGCCRSKEQAHAWLSCLGGLAEEHLL CEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLSQRLSGALTLNLIHCDDCPNSAILPLLKERLQRMTASGLTAGGCNLVTATSQVELQYQ HHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEC PETVDRRSFFTSFRNSLFQAAADVMQTSAKPVERSSSYGDKRIPQRRELLNQTRSSLPEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCHH QQATAAKQFDHSIRFNTACSACQGCVAICPTGALVSNVQEEHPEFVQERCTGCGLCVEFC HHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LDQAIRL HHHHHCC >Mature Secondary Structure SSSAKKQVPVGSRDDLQIDPSRCLRTRFSESVCNHCQAICPAAALSLEDGLVINQEQCS CCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCC GCLLCTTVCPSGALEQQADFQAIILQLRKVPKPVLGCCRSKEQAHAWLSCLGGLAEEHLL CEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLSQRLSGALTLNLIHCDDCPNSAILPLLKERLQRMTASGLTAGGCNLVTATSQVELQYQ HHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEC PETVDRRSFFTSFRNSLFQAAADVMQTSAKPVERSSSYGDKRIPQRRELLNQTRSSLPEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCHH QQATAAKQFDHSIRFNTACSACQGCVAICPTGALVSNVQEEHPEFVQERCTGCGLCVEFC HHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LDQAIRL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA