Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 189424208

GI number: 189424208

Start: 1192828

End: 1193664

Strand: Reverse

Name: rsmI [H]

Synonym: Glov_1143

Alternate gene names: 189424208

Gene position: 1193664-1192828 (Counterclockwise)

Preceding gene: 189424209

Following gene: 189424207

Centisome position: 30.47

GC content: 60.1

Gene sequence:

>837_bases
ATGACCGGAACCCTCTACATTGTGGCCACACCGATCGGTAATCTGGAGGATATGACCTTTCGGGCTGTCCGTATTCTCCA
GGAAGTTGACCTGATCGCCGCGGAAGACACCCGTCATTCCCGCAAGCTGCTCTCCCATTTCGGCATCACCACGACGCTGA
CCTCGTACTACGATCACAACCAGTCCCTGAAGGGGGAACGTATCCTGGCAACCCTGCGGGATGGCAAGCAGGTGGCACTG
ATCTCCGATGCCGGAACGCCCTGCATCTCCGACCCGGGCTATCAATTGGTGCGGGATGCCCTGGTCGAGGGGATCAAAGT
TGCGCCGATACCGGGAGCTTGTGCCGCCATAACGGCACTTTCTGTAGCCGGACTCCCCACTGACTCCTTCACTTTTGCCG
GCTTTCCGCCGAATAAAGAAGGTAAGCGCCGGTCGTTCCTGGCCGGATTATTGAACGCCCACGGCACACTGGTTTTGTAC
GAAGCCCCGCACCGCCTTACAGAAACCCTGACCGATATAGCCGACATCCTGGGAGATCGTCAGGTGGTGGTAACGCGGGA
GCTGACCAAGCTGTATGAGGAATGCCTGCGCGGCACGGCCCGCGAAGTGCGGGAACAGGCTCGCGAGGGACGTGAACGTG
GCGAAATGGTGATCCTGATCGCACCTGCCGACGAGAACACGCAAGCACTGGAGGGACCCTCTCCGGAAGAGCAGTTGCGG
GCCGCTCTGCTTAAAGGGCACACCGTCAAAGAGACTGCCGCCCTGGTGGCGGCGGCGACCGGCCTGCCGCGGCGTGAACT
GTATGCGCAGGCATTGCTGCTGAGAACCAATCTGTAA

Upstream 100 bases:

>100_bases
ACAGTACCGAAGAGAGCCATCTGAAGGACCCATCCTTTCATGATCTGGCTGCCGACGGCATCCTGGATGGTATCCGGGGC
TATATCAGCTCGCTGAAATA

Downstream 100 bases:

>100_bases
GATATACCCCTGCAAGGAGCTGCTTTGATGAAAATTTCCGTATTTGGTGCCGGTTATGTCGGCCTGGTTGCTGCGGCCTG
CTTTGCTGAGAGCGGCAACA

Product: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTGTLYIVATPIGNLEDMTFRAVRILQEVDLIAAEDTRHSRKLLSHFGITTTLTSYYDHNQSLKGERILATLRDGKQVAL
ISDAGTPCISDPGYQLVRDALVEGIKVAPIPGACAAITALSVAGLPTDSFTFAGFPPNKEGKRRSFLAGLLNAHGTLVLY
EAPHRLTETLTDIADILGDRQVVVTRELTKLYEECLRGTAREVREQAREGRERGEMVILIAPADENTQALEGPSPEEQLR
AALLKGHTVKETAALVAAATGLPRRELYAQALLLRTNL

Sequences:

>Translated_278_residues
MTGTLYIVATPIGNLEDMTFRAVRILQEVDLIAAEDTRHSRKLLSHFGITTTLTSYYDHNQSLKGERILATLRDGKQVAL
ISDAGTPCISDPGYQLVRDALVEGIKVAPIPGACAAITALSVAGLPTDSFTFAGFPPNKEGKRRSFLAGLLNAHGTLVLY
EAPHRLTETLTDIADILGDRQVVVTRELTKLYEECLRGTAREVREQAREGRERGEMVILIAPADENTQALEGPSPEEQLR
AALLKGHTVKETAALVAAATGLPRRELYAQALLLRTNL
>Mature_277_residues
TGTLYIVATPIGNLEDMTFRAVRILQEVDLIAAEDTRHSRKLLSHFGITTTLTSYYDHNQSLKGERILATLRDGKQVALI
SDAGTPCISDPGYQLVRDALVEGIKVAPIPGACAAITALSVAGLPTDSFTFAGFPPNKEGKRRSFLAGLLNAHGTLVLYE
APHRLTETLTDIADILGDRQVVVTRELTKLYEECLRGTAREVREQAREGRERGEMVILIAPADENTQALEGPSPEEQLRA
ALLKGHTVKETAALVAAATGLPRRELYAQALLLRTNL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=247, Percent_Identity=50.2024291497976, Blast_Score=224, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30223; Mature: 30092

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTLYIVATPIGNLEDMTFRAVRILQEVDLIAAEDTRHSRKLLSHFGITTTLTSYYDHN
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCC
QSLKGERILATLRDGKQVALISDAGTPCISDPGYQLVRDALVEGIKVAPIPGACAAITAL
CCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHH
SVAGLPTDSFTFAGFPPNKEGKRRSFLAGLLNAHGTLVLYEAPHRLTETLTDIADILGDR
HHCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCC
QVVVTRELTKLYEECLRGTAREVREQAREGRERGEMVILIAPADENTQALEGPSPEEQLR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHH
AALLKGHTVKETAALVAAATGLPRRELYAQALLLRTNL
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGTLYIVATPIGNLEDMTFRAVRILQEVDLIAAEDTRHSRKLLSHFGITTTLTSYYDHN
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCC
QSLKGERILATLRDGKQVALISDAGTPCISDPGYQLVRDALVEGIKVAPIPGACAAITAL
CCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHH
SVAGLPTDSFTFAGFPPNKEGKRRSFLAGLLNAHGTLVLYEAPHRLTETLTDIADILGDR
HHCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCC
QVVVTRELTKLYEECLRGTAREVREQAREGRERGEMVILIAPADENTQALEGPSPEEQLR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHH
AALLKGHTVKETAALVAAATGLPRRELYAQALLLRTNL
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]