| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424178
Identifier: 189424178
GI number: 189424178
Start: 1164543
End: 1165349
Strand: Reverse
Name: 189424178
Synonym: Glov_1113
Alternate gene names: NA
Gene position: 1165349-1164543 (Counterclockwise)
Preceding gene: 189424184
Following gene: 189424177
Centisome position: 29.75
GC content: 60.22
Gene sequence:
>807_bases TTGAGCACCCCAAAAAAGCCGGAACAGATCCACACCCGCATCTGGTTGGAAGAGCAGGAGCCGGACAATCCGTTCGCCGC AAAGACGGCCTACTGTCACGGCTATGACGTCTACGGAGAACTGCTTGGCCAGGCCCGTTGGACTGAAATGCTCTATCTGC TTTTCAGGGGCGAGGCCCCCACAGACACCCAAACAAGGCTGTTGGATACCCTTGCACTGGCACTGGCCAACCCCGGCCCC CGTGACCAATCGGTACACGCTGCCATGTGCGGCGGTGTGGGTGGCTCCACTGCGGCCTCATGCCTGATTGCCGCCCTGGC CGTGGGCGCGGGGCAGCTTTCCGGAGGGCGCGAACTGTTTCTATCTATGGAACTATGGAACGCCTGCGGTACAGACCTTG CTTCCTGGTACACCAGATTTGCCATGCCCGCTGATACAACGGTCTCTCTCTGGCCGGCGCCTGCTCATCCCCCCGGATTT GACCCCCATGGCGTCAGCACCGCCACACCGGTACTACAGACGCTCACCTGCCTGGCAGAAATTAGTGACGCACCACTGCT CCCCTGGTTACAGGCACATCTCTCAGACCTTGAGACGGCAGCAGGCCTCCCCTTGGCCCTGAGCGGTGTGGCTGCCGCTG CCTTGGTTGACCTTGGTTTTACCCCTGAGCAGGGGGAGATGCTCTACCTGCTGCTACGTCTGCCCGGGGCAGCGGTCCAT GCACTGGAACAAAAACAGCTTGGCTACAAAAAATTTCCGTTCTTTTCCATTGAGCTGGAGAATGACCCGGCCGGAGGCAG CCCATGA
Upstream 100 bases:
>100_bases ATTTACAAACAAAACGAGCTATGGCATTTCTAACGCTATTATCGAAATATGCAAGCAGCAGCTCGGCACGCAACCACCAC TCCATCCACAGGTACGCACA
Downstream 100 bases:
>100_bases ACGGTCCCGACTTTTTACAACAGCATACCGACCGCCTGAAAAGCCGTATGGGAGCCTGCTTCCCCGGTGAACGTGCCGTG TTCCGCGGCCACGACCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSTPKKPEQIHTRIWLEEQEPDNPFAAKTAYCHGYDVYGELLGQARWTEMLYLLFRGEAPTDTQTRLLDTLALALANPGP RDQSVHAAMCGGVGGSTAASCLIAALAVGAGQLSGGRELFLSMELWNACGTDLASWYTRFAMPADTTVSLWPAPAHPPGF DPHGVSTATPVLQTLTCLAEISDAPLLPWLQAHLSDLETAAGLPLALSGVAAAALVDLGFTPEQGEMLYLLLRLPGAAVH ALEQKQLGYKKFPFFSIELENDPAGGSP
Sequences:
>Translated_268_residues MSTPKKPEQIHTRIWLEEQEPDNPFAAKTAYCHGYDVYGELLGQARWTEMLYLLFRGEAPTDTQTRLLDTLALALANPGP RDQSVHAAMCGGVGGSTAASCLIAALAVGAGQLSGGRELFLSMELWNACGTDLASWYTRFAMPADTTVSLWPAPAHPPGF DPHGVSTATPVLQTLTCLAEISDAPLLPWLQAHLSDLETAAGLPLALSGVAAAALVDLGFTPEQGEMLYLLLRLPGAAVH ALEQKQLGYKKFPFFSIELENDPAGGSP >Mature_267_residues STPKKPEQIHTRIWLEEQEPDNPFAAKTAYCHGYDVYGELLGQARWTEMLYLLFRGEAPTDTQTRLLDTLALALANPGPR DQSVHAAMCGGVGGSTAASCLIAALAVGAGQLSGGRELFLSMELWNACGTDLASWYTRFAMPADTTVSLWPAPAHPPGFD PHGVSTATPVLQTLTCLAEISDAPLLPWLQAHLSDLETAAGLPLALSGVAAAALVDLGFTPEQGEMLYLLLRLPGAAVHA LEQKQLGYKKFPFFSIELENDPAGGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28556; Mature: 28425
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPKKPEQIHTRIWLEEQEPDNPFAAKTAYCHGYDVYGELLGQARWTEMLYLLFRGEAP CCCCCCHHHHHHEEEEECCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC TDTQTRLLDTLALALANPGPRDQSVHAAMCGGVGGSTAASCLIAALAVGAGQLSGGRELF CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE LSMELWNACGTDLASWYTRFAMPADTTVSLWPAPAHPPGFDPHGVSTATPVLQTLTCLAE EEHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ISDAPLLPWLQAHLSDLETAAGLPLALSGVAAAALVDLGFTPEQGEMLYLLLRLPGAAVH HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHH ALEQKQLGYKKFPFFSIELENDPAGGSP HHHHHHCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure STPKKPEQIHTRIWLEEQEPDNPFAAKTAYCHGYDVYGELLGQARWTEMLYLLFRGEAP CCCCCHHHHHHEEEEECCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC TDTQTRLLDTLALALANPGPRDQSVHAAMCGGVGGSTAASCLIAALAVGAGQLSGGRELF CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE LSMELWNACGTDLASWYTRFAMPADTTVSLWPAPAHPPGFDPHGVSTATPVLQTLTCLAE EEHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ISDAPLLPWLQAHLSDLETAAGLPLALSGVAAAALVDLGFTPEQGEMLYLLLRLPGAAVH HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHH ALEQKQLGYKKFPFFSIELENDPAGGSP HHHHHHCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA