| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424158
Identifier: 189424158
GI number: 189424158
Start: 1141135
End: 1142706
Strand: Reverse
Name: 189424158
Synonym: Glov_1093
Alternate gene names: NA
Gene position: 1142706-1141135 (Counterclockwise)
Preceding gene: 189424159
Following gene: 189424157
Centisome position: 29.17
GC content: 57.0
Gene sequence:
>1572_bases ATGCCACCGTCATTATTCACCAAAATCCTGCACCTAACACTGGTTGGCCTGCTGTTCGTCACTGCGCAACAGGCGCAGGC TGTTTCCACAGACGAACTCCAAGGGCAGCTGTCTTCTGCATCCACAACACTGCCTGCCCAATGCCGGGATCACCTACTGA AGGCCCATGGTGTTGCCAGACAGCAGGTGGATGCAGGACTGAATCAGGAGCTGGCCCGTTTTCGCACCCTGGCAGAGCAG GCCTTGATGCTGCGGGCCGAGACCATCTCGGTGGGCAGACGGATCAAAAACCAGCTGGAGCAGAAAAAACCGCTCTCCGG CGACGATCTGGAGATCATGAACATCGGCATTACCGAGCACCTGAAGCTGCGCAAGGAGCTGATGGAGGTTGCCGAATCCC ACGAATGCTGGCTGGATGGGACCGAACAGGAGTGGCAGAGCCGGGGCGTATCGCCGGAGACACGGTTGAACGGGGTGATG ATGTCGCTTGCATCCGCCTTTTTGCTGTATGACAATTATCTGCTGTCGGTCTCGCTGTTTGAAGGGGATGCCAAGCTGCG GCGCCTGCTGAATGAGGCTGATCCCGGCTATGCGGTGCAGAGCGCCGCCCTGGCCAAGGTAACCCTCTCCTACAACTCCA TCAACAACCGCAGCCGGGCCCGCAAGGCGATCAAATTCTACGAGCGGGAGGCAAAGCGATTCAGCCGGACCGTGGATGCC AACCCGGAAACCGCCTACATCAATCTGTTGATCAAGCAGAGCCCTTCCTATTCCATGGTGCGCACCTGGTCACCGTTTTA CGTGGTGGGCCGCAAGGTCGGCTTTCTGGGTGGCGTGACGGAAGACACCCTTTCCGGTCTGGAGCGGCACGGTATCAGCC TGTTCAGCATGGTCTTCGGCAATGCCGTCGGGCTGGTGGAAACCCGCAAGGGCAAGCTGTATCGCAAACCGCCGGTCAGG GAACAGTTGACAGGCACCCTGCAGGCTGGCGATGTGCTGTTGGAAAAGACCCCTTTCCGCCTGACCGACAAGCTGATCCC CGGCTACTGGGGCCACGCAGCGGTCTGGATCGGCACTGAAAAGGAGTTGCGGGAACTGGGTATCTGGGACAATCCACTGG TCAAGCGCTACCATGACAAGATTCAGCAGGGACGCGGCGTGGTTGAGGCGTTGCGTTCCGGGGTGGAGATAAATCCGCTT GAGCAGTTTATGAATATCGACAGCATCGGAATCTTACGCAAACAGAACATCAGCAGGGATGACCGGATCAGAGTCATCCT GCAATCATTGCGGCAGGTGGGGAAACCGTATGATTTCAATTTTGATGTGGAATCAAAGGAGCGGGTCTACTGCTCAAAGC TGGTCTATCTGACCTACAGTGGGGTGGAGTGGCCCACCAAAAAATCGCTGGGGCGCACCACCTTTACCCCTGATGATGTG GCGAACCGCGCCCTGGCAGGTGATTTCCGGTTGGTGCTGTTTTACCACAACGGCAAAGAAGTTCAAAAAGCGCCACTTGA ACAGATGGCAAGTCTGATGGAGCAACAGGTTAAGGCATCTGCAGCACGTTAA
Upstream 100 bases:
>100_bases TTGTTGCCGTAGGACTGTTGCTGCTGGTGATCGGCTGGTTCGCACCGGTGCCACCGAAACAAGAATAGCCCCGGATCATC CATGTATAAGGGAGAAGATC
Downstream 100 bases:
>100_bases GGTGTCTGTCTGATAACTTTTGACACAACAAACAGCATCCGAAGGACATTGGATGCTGTTTGTGCGTAGCGCCTCTTACA ACGCTGGCGTTACGCTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MPPSLFTKILHLTLVGLLFVTAQQAQAVSTDELQGQLSSASTTLPAQCRDHLLKAHGVARQQVDAGLNQELARFRTLAEQ ALMLRAETISVGRRIKNQLEQKKPLSGDDLEIMNIGITEHLKLRKELMEVAESHECWLDGTEQEWQSRGVSPETRLNGVM MSLASAFLLYDNYLLSVSLFEGDAKLRRLLNEADPGYAVQSAALAKVTLSYNSINNRSRARKAIKFYEREAKRFSRTVDA NPETAYINLLIKQSPSYSMVRTWSPFYVVGRKVGFLGGVTEDTLSGLERHGISLFSMVFGNAVGLVETRKGKLYRKPPVR EQLTGTLQAGDVLLEKTPFRLTDKLIPGYWGHAAVWIGTEKELRELGIWDNPLVKRYHDKIQQGRGVVEALRSGVEINPL EQFMNIDSIGILRKQNISRDDRIRVILQSLRQVGKPYDFNFDVESKERVYCSKLVYLTYSGVEWPTKKSLGRTTFTPDDV ANRALAGDFRLVLFYHNGKEVQKAPLEQMASLMEQQVKASAAR
Sequences:
>Translated_523_residues MPPSLFTKILHLTLVGLLFVTAQQAQAVSTDELQGQLSSASTTLPAQCRDHLLKAHGVARQQVDAGLNQELARFRTLAEQ ALMLRAETISVGRRIKNQLEQKKPLSGDDLEIMNIGITEHLKLRKELMEVAESHECWLDGTEQEWQSRGVSPETRLNGVM MSLASAFLLYDNYLLSVSLFEGDAKLRRLLNEADPGYAVQSAALAKVTLSYNSINNRSRARKAIKFYEREAKRFSRTVDA NPETAYINLLIKQSPSYSMVRTWSPFYVVGRKVGFLGGVTEDTLSGLERHGISLFSMVFGNAVGLVETRKGKLYRKPPVR EQLTGTLQAGDVLLEKTPFRLTDKLIPGYWGHAAVWIGTEKELRELGIWDNPLVKRYHDKIQQGRGVVEALRSGVEINPL EQFMNIDSIGILRKQNISRDDRIRVILQSLRQVGKPYDFNFDVESKERVYCSKLVYLTYSGVEWPTKKSLGRTTFTPDDV ANRALAGDFRLVLFYHNGKEVQKAPLEQMASLMEQQVKASAAR >Mature_522_residues PPSLFTKILHLTLVGLLFVTAQQAQAVSTDELQGQLSSASTTLPAQCRDHLLKAHGVARQQVDAGLNQELARFRTLAEQA LMLRAETISVGRRIKNQLEQKKPLSGDDLEIMNIGITEHLKLRKELMEVAESHECWLDGTEQEWQSRGVSPETRLNGVMM SLASAFLLYDNYLLSVSLFEGDAKLRRLLNEADPGYAVQSAALAKVTLSYNSINNRSRARKAIKFYEREAKRFSRTVDAN PETAYINLLIKQSPSYSMVRTWSPFYVVGRKVGFLGGVTEDTLSGLERHGISLFSMVFGNAVGLVETRKGKLYRKPPVRE QLTGTLQAGDVLLEKTPFRLTDKLIPGYWGHAAVWIGTEKELRELGIWDNPLVKRYHDKIQQGRGVVEALRSGVEINPLE QFMNIDSIGILRKQNISRDDRIRVILQSLRQVGKPYDFNFDVESKERVYCSKLVYLTYSGVEWPTKKSLGRTTFTPDDVA NRALAGDFRLVLFYHNGKEVQKAPLEQMASLMEQQVKASAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58933; Mature: 58802
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSLFTKILHLTLVGLLFVTAQQAQAVSTDELQGQLSSASTTLPAQCRDHLLKAHGVAR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QQVDAGLNQELARFRTLAEQALMLRAETISVGRRIKNQLEQKKPLSGDDLEIMNIGITEH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH LKLRKELMEVAESHECWLDGTEQEWQSRGVSPETRLNGVMMSLASAFLLYDNYLLSVSLF HHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEE EGDAKLRRLLNEADPGYAVQSAALAKVTLSYNSINNRSRARKAIKFYEREAKRFSRTVDA CCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NPETAYINLLIKQSPSYSMVRTWSPFYVVGRKVGFLGGVTEDTLSGLERHGISLFSMVFG CCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC NAVGLVETRKGKLYRKPPVREQLTGTLQAGDVLLEKTPFRLTDKLIPGYWGHAAVWIGTE CCCCEEEECCCCCCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCH KELRELGIWDNPLVKRYHDKIQQGRGVVEALRSGVEINPLEQFMNIDSIGILRKQNISRD HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCH DRIRVILQSLRQVGKPYDFNFDVESKERVYCSKLVYLTYSGVEWPTKKSLGRTTFTPDDV HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCHHCCCCCCCCHHHH ANRALAGDFRLVLFYHNGKEVQKAPLEQMASLMEQQVKASAAR HHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPSLFTKILHLTLVGLLFVTAQQAQAVSTDELQGQLSSASTTLPAQCRDHLLKAHGVAR CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QQVDAGLNQELARFRTLAEQALMLRAETISVGRRIKNQLEQKKPLSGDDLEIMNIGITEH HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH LKLRKELMEVAESHECWLDGTEQEWQSRGVSPETRLNGVMMSLASAFLLYDNYLLSVSLF HHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEE EGDAKLRRLLNEADPGYAVQSAALAKVTLSYNSINNRSRARKAIKFYEREAKRFSRTVDA CCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NPETAYINLLIKQSPSYSMVRTWSPFYVVGRKVGFLGGVTEDTLSGLERHGISLFSMVFG CCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC NAVGLVETRKGKLYRKPPVREQLTGTLQAGDVLLEKTPFRLTDKLIPGYWGHAAVWIGTE CCCCEEEECCCCCCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCH KELRELGIWDNPLVKRYHDKIQQGRGVVEALRSGVEINPLEQFMNIDSIGILRKQNISRD HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCH DRIRVILQSLRQVGKPYDFNFDVESKERVYCSKLVYLTYSGVEWPTKKSLGRTTFTPDDV HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCHHCCCCCCCCHHHH ANRALAGDFRLVLFYHNGKEVQKAPLEQMASLMEQQVKASAAR HHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA