| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424157
Identifier: 189424157
GI number: 189424157
Start: 1138940
End: 1140598
Strand: Reverse
Name: 189424157
Synonym: Glov_1091
Alternate gene names: NA
Gene position: 1140598-1138940 (Counterclockwise)
Preceding gene: 189424158
Following gene: 189424153
Centisome position: 29.11
GC content: 58.71
Gene sequence:
>1659_bases ATGCAGATACTTTCCCTGCTGGTCGTATGTCTGGGGCTCCTGCTGCCCGCATCTGTCTTTGCAGCACCGCCGGCACGTAT ACCGGCACAGGCCACCATCAGTGCGGTTACGGTCTATCAGGACCGGGCCCAGGTCACCCGCAGCGTAACTGTCGCATTGA AACCGGGTAGTCAGGTCATTGCGATTGAGGGGCTGCCGGTGCTGTTACAGGACGACTCAGTAAGGGTCGATGCCAAGGGA ACGGCACGGGCCACCATTACCGGTATTGAGGTCAAGCGCAGCTTTCTGAGCCAGACTGCAGACAAACGGGTCAAGGAGAT TGAGGCGGAACTGAGGCAGCTGGAACGCAAGCTGGGTGGCCTTGATGCCAGAAAGGCCGGACTGGTTGCCCAGAAGGGGT TTGTTGATTCAATCAAGGTGGCCTGGGGTGAGCGGATCTCACAGCAACTGGCCATCGGCAAGCCGACCGGCGCTGAACTG AATGAGGCCATGGGCTTTGTAGGCAGCAATACCGTCAAGGTTGAAGATCAGCAGCGCGAGATTGAGCAGGAAAAACAGAT CATCAAAGAGCAGATCGATGCCCTGAAACGCAAAAAGCAGGAGGCCACCGGTTCCTACCGCAAGGAGAGCAAGACCGTTG AAGTGGCAGTAGAGACAGCCAAAGAAGGCAAACTGACTCTGGACCTGTCCGGGGTTGTCAACCAGGCCACCTGGGAGCCA AGCTATGATGTACGTCTGGCTCAGGATGGCACCAGCGCAGAGCTAACCTATCGCGCCCAGGTCCGTCAGCAGACCGGCGA AGACTGGAACAATGTAGCGCTGACTCTCTCCACGGCCCGCCCGGCCAGTGGTGGCGCCCCGCCCACCCTCCACCCCTGGC GGATCTCCTTCTACCGCCCCATGCCGATGGCCATGCCAGCTGCAGCACCAATCCGCAGCTACAAAAAGGCGGCCAGGCCC GTGATGGCAGAGAGCATGAAAGCCGATATGGCGATGGAAGAGGAAGAGCCTGCTCCGGCAGCCTTCCAGACGGCCCAGGC AGCTACGGAGGGAACCTCAATCGCATTTAAAATCCCAAAACCGGTTGAGATCCCCTCGGACAACACCCGTCACAGCACGG TGATAGCACTTGAAAAGCTGCCGGTCAGCACCGAATACAGTACAGTGCCCAAGCTGGCGGCGGTTGCCTACCTGACCGCC GAGCTGGTTAACAAGGCCGGCTGGCCGCTGCTGCCCGGCACCGTCAAGATCTTCAGCGGCAACACCTTTGTGGGTAGCGC TGACATGAAGCAGGTGGCCTCAGGCGAAAAGTTCACCCTTCCCTTTGGCAGCGACGACCAGATCACAGTCAAGCGGGAAG AGCTGAAGCAGCATAAAGAGGCCGGCCTGTTCGGCAAAAACCGGATGGGTTATCGCTCGACCGTAACCGTCACCAACTTC CGCAAAGAGGCCCAGACAGTCAACGTCAAGGATCAACTGCCGCTGGCCGGCGACAGCGAAATCACGGTCAGCCTGGAAGA GGCTACCCTGCCGCCAACCGAGAAGAAGGATGATGGCACACTGATCTGGAAGCTGAAGCTGGCAGCTGGTGAGAAGAAGG TAATCAGTTACGAGATTGTGGTGGAGTATCCCAAGGACCGGGAAGTTACGGGGCTGTAG
Upstream 100 bases:
>100_bases GTCAATACAGCAACGCATTCGATGCATAGTACCAGATCAAGACACAGCACATATTTCTGGTATACTTATTCAGGTTAAGC TCACTTTCAGGAGGTTGTTC
Downstream 100 bases:
>100_bases CAGCAAAGCAACAGCACGCGGATGACACGGTTTTTGGCAGATATACGCGGGTAAAGCGAAGAATAGCCCTGAAAACGGCA GTTCATATCCACGAAGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MQILSLLVVCLGLLLPASVFAAPPARIPAQATISAVTVYQDRAQVTRSVTVALKPGSQVIAIEGLPVLLQDDSVRVDAKG TARATITGIEVKRSFLSQTADKRVKEIEAELRQLERKLGGLDARKAGLVAQKGFVDSIKVAWGERISQQLAIGKPTGAEL NEAMGFVGSNTVKVEDQQREIEQEKQIIKEQIDALKRKKQEATGSYRKESKTVEVAVETAKEGKLTLDLSGVVNQATWEP SYDVRLAQDGTSAELTYRAQVRQQTGEDWNNVALTLSTARPASGGAPPTLHPWRISFYRPMPMAMPAAAPIRSYKKAARP VMAESMKADMAMEEEEPAPAAFQTAQAATEGTSIAFKIPKPVEIPSDNTRHSTVIALEKLPVSTEYSTVPKLAAVAYLTA ELVNKAGWPLLPGTVKIFSGNTFVGSADMKQVASGEKFTLPFGSDDQITVKREELKQHKEAGLFGKNRMGYRSTVTVTNF RKEAQTVNVKDQLPLAGDSEITVSLEEATLPPTEKKDDGTLIWKLKLAAGEKKVISYEIVVEYPKDREVTGL
Sequences:
>Translated_552_residues MQILSLLVVCLGLLLPASVFAAPPARIPAQATISAVTVYQDRAQVTRSVTVALKPGSQVIAIEGLPVLLQDDSVRVDAKG TARATITGIEVKRSFLSQTADKRVKEIEAELRQLERKLGGLDARKAGLVAQKGFVDSIKVAWGERISQQLAIGKPTGAEL NEAMGFVGSNTVKVEDQQREIEQEKQIIKEQIDALKRKKQEATGSYRKESKTVEVAVETAKEGKLTLDLSGVVNQATWEP SYDVRLAQDGTSAELTYRAQVRQQTGEDWNNVALTLSTARPASGGAPPTLHPWRISFYRPMPMAMPAAAPIRSYKKAARP VMAESMKADMAMEEEEPAPAAFQTAQAATEGTSIAFKIPKPVEIPSDNTRHSTVIALEKLPVSTEYSTVPKLAAVAYLTA ELVNKAGWPLLPGTVKIFSGNTFVGSADMKQVASGEKFTLPFGSDDQITVKREELKQHKEAGLFGKNRMGYRSTVTVTNF RKEAQTVNVKDQLPLAGDSEITVSLEEATLPPTEKKDDGTLIWKLKLAAGEKKVISYEIVVEYPKDREVTGL >Mature_552_residues MQILSLLVVCLGLLLPASVFAAPPARIPAQATISAVTVYQDRAQVTRSVTVALKPGSQVIAIEGLPVLLQDDSVRVDAKG TARATITGIEVKRSFLSQTADKRVKEIEAELRQLERKLGGLDARKAGLVAQKGFVDSIKVAWGERISQQLAIGKPTGAEL NEAMGFVGSNTVKVEDQQREIEQEKQIIKEQIDALKRKKQEATGSYRKESKTVEVAVETAKEGKLTLDLSGVVNQATWEP SYDVRLAQDGTSAELTYRAQVRQQTGEDWNNVALTLSTARPASGGAPPTLHPWRISFYRPMPMAMPAAAPIRSYKKAARP VMAESMKADMAMEEEEPAPAAFQTAQAATEGTSIAFKIPKPVEIPSDNTRHSTVIALEKLPVSTEYSTVPKLAAVAYLTA ELVNKAGWPLLPGTVKIFSGNTFVGSADMKQVASGEKFTLPFGSDDQITVKREELKQHKEAGLFGKNRMGYRSTVTVTNF RKEAQTVNVKDQLPLAGDSEITVSLEEATLPPTEKKDDGTLIWKLKLAAGEKKVISYEIVVEYPKDREVTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17566994, Length=557, Percent_Identity=28.5457809694794, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17566996, Length=561, Percent_Identity=28.3422459893048, Blast_Score=172, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17566992, Length=528, Percent_Identity=27.4621212121212, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71988071, Length=527, Percent_Identity=26.7552182163188, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115534513, Length=374, Percent_Identity=25.4010695187166, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71988077, Length=312, Percent_Identity=27.8846153846154, Blast_Score=103, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60025; Mature: 60025
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILSLLVVCLGLLLPASVFAAPPARIPAQATISAVTVYQDRAQVTRSVTVALKPGSQVI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHEEEEEEEECCCCEEE AIEGLPVLLQDDSVRVDAKGTARATITGIEVKRSFLSQTADKRVKEIEAELRQLERKLGG EECCEEEEEECCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDARKAGLVAQKGFVDSIKVAWGERISQQLAIGKPTGAELNEAMGFVGSNTVKVEDQQRE CCCHHHCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECHHHHH IEQEKQIIKEQIDALKRKKQEATGSYRKESKTVEVAVETAKEGKLTLDLSGVVNQATWEP HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCCCC SYDVRLAQDGTSAELTYRAQVRQQTGEDWNNVALTLSTARPASGGAPPTLHPWRISFYRP CCCEEEECCCCCCEEEEHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC MPMAMPAAAPIRSYKKAARPVMAESMKADMAMEEEEPAPAAFQTAQAATEGTSIAFKIPK CCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC PVEIPSDNTRHSTVIALEKLPVSTEYSTVPKLAAVAYLTAELVNKAGWPLLPGTVKIFSG CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC NTFVGSADMKQVASGEKFTLPFGSDDQITVKREELKQHKEAGLFGKNRMGYRSTVTVTNF CEEECCCHHHHHHCCCEEEECCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEEC RKEAQTVNVKDQLPLAGDSEITVSLEEATLPPTEKKDDGTLIWKLKLAAGEKKVISYEIV HHHHHEECCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEE VEYPKDREVTGL EECCCCCCCCCC >Mature Secondary Structure MQILSLLVVCLGLLLPASVFAAPPARIPAQATISAVTVYQDRAQVTRSVTVALKPGSQVI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHEEEEEEEECCCCEEE AIEGLPVLLQDDSVRVDAKGTARATITGIEVKRSFLSQTADKRVKEIEAELRQLERKLGG EECCEEEEEECCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDARKAGLVAQKGFVDSIKVAWGERISQQLAIGKPTGAELNEAMGFVGSNTVKVEDQQRE CCCHHHCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECHHHHH IEQEKQIIKEQIDALKRKKQEATGSYRKESKTVEVAVETAKEGKLTLDLSGVVNQATWEP HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCEEEEECCCCCCCCCCC SYDVRLAQDGTSAELTYRAQVRQQTGEDWNNVALTLSTARPASGGAPPTLHPWRISFYRP CCCEEEECCCCCCEEEEHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC MPMAMPAAAPIRSYKKAARPVMAESMKADMAMEEEEPAPAAFQTAQAATEGTSIAFKIPK CCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC PVEIPSDNTRHSTVIALEKLPVSTEYSTVPKLAAVAYLTAELVNKAGWPLLPGTVKIFSG CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC NTFVGSADMKQVASGEKFTLPFGSDDQITVKREELKQHKEAGLFGKNRMGYRSTVTVTNF CEEECCCHHHHHHCCCEEEECCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEEC RKEAQTVNVKDQLPLAGDSEITVSLEEATLPPTEKKDDGTLIWKLKLAAGEKKVISYEIV HHHHHEECCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEE VEYPKDREVTGL EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA