| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is catD [H]
Identifier: 189424068
GI number: 189424068
Start: 1040472
End: 1041314
Strand: Reverse
Name: catD [H]
Synonym: Glov_1002
Alternate gene names: 189424068
Gene position: 1041314-1040472 (Counterclockwise)
Preceding gene: 189424069
Following gene: 189424067
Centisome position: 26.58
GC content: 58.01
Gene sequence:
>843_bases ATGATTGCAAAAAATGCGTTTATAAACGGTAACATGATCGCCTATGACGATGTCGGGACCGGACCGGCGGTTATGCTGAT CCACGGCTTCCCCCTGAACCGCAGTATGTGGCGGCCGCAGCTGGGTGATCTGGTGGCAGCCGGGTACCGGGTCATTACCT CTGATCTACGGGGATTTGGTGAAAGTGATGCGCCTGATGGGACCTACAGCATGGATCTGTTCAGTGATGATCTGATCAGC CTGCTGGATCATCTGGAGATTGAGCAGGCAGTGGCGGCGGGGATGTCCATGGGCGGCTATGTGCTGTTCAACCTGCTGGC CCGCTATCCTGAGCGGATCAGTGGCGCTGTCTTTGTGGTGACCCGTTCTGTTGCAGATGATGAGGCTGGCCGCGCACGGC GCTTACAGCTTGCAACAGAGCTGCTTACATTTGGCCCGCAGGTGGTTGCTGACAGCTTTCATCCTCTGATGTTTGCACCG GGTACTGTGGAGGCACGCCCGAAACTTGCCGAAGAGGTCTATGACTGGATGGTGGCCAATGCAAGCCGGGGGCTGGCAGG CGGGCTGCTTGCCATGCGTGAACGCCCGGATGTAACCCCGCTGCTCCCCTCCATCACCACGCCGTCACTGGTGATAGCAG CAGAACAGGACAAGGCCTGCCCCCTTGAGCATCCCCACATGATCGCCAACAACATCAGCGCAAGCCAGCTTGCCGTCATT GCCGATGCCGGTCATCTGGTGAACCTTGAACAGCCGAACGGGTTTAATCACTGCCTGCTGGAGTTCCTGCGCAAGGTTGC TCCCACAGCGCTGAATGACGGTACGATTGGATGCCACTGCTGA
Upstream 100 bases:
>100_bases TCCATCAACAAGAGTCGCTTTAGGCGGTTCAACCTCATGCCCGTTTGCTGAAGACACACACAACCAACTAAGCATCGACA GCAGGCTAGCGGAGCCCCCT
Downstream 100 bases:
>100_bases CCGGAAAGGAGAACACCATGAACCTCACCAACATTCCACGCCAGGCCCTGCCTGAGCTGCTCTGCCGGATGCCAAAGGCT GAACTGCATATCCATATTGA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MIAKNAFINGNMIAYDDVGTGPAVMLIHGFPLNRSMWRPQLGDLVAAGYRVITSDLRGFGESDAPDGTYSMDLFSDDLIS LLDHLEIEQAVAAGMSMGGYVLFNLLARYPERISGAVFVVTRSVADDEAGRARRLQLATELLTFGPQVVADSFHPLMFAP GTVEARPKLAEEVYDWMVANASRGLAGGLLAMRERPDVTPLLPSITTPSLVIAAEQDKACPLEHPHMIANNISASQLAVI ADAGHLVNLEQPNGFNHCLLEFLRKVAPTALNDGTIGCHC
Sequences:
>Translated_280_residues MIAKNAFINGNMIAYDDVGTGPAVMLIHGFPLNRSMWRPQLGDLVAAGYRVITSDLRGFGESDAPDGTYSMDLFSDDLIS LLDHLEIEQAVAAGMSMGGYVLFNLLARYPERISGAVFVVTRSVADDEAGRARRLQLATELLTFGPQVVADSFHPLMFAP GTVEARPKLAEEVYDWMVANASRGLAGGLLAMRERPDVTPLLPSITTPSLVIAAEQDKACPLEHPHMIANNISASQLAVI ADAGHLVNLEQPNGFNHCLLEFLRKVAPTALNDGTIGCHC >Mature_280_residues MIAKNAFINGNMIAYDDVGTGPAVMLIHGFPLNRSMWRPQLGDLVAAGYRVITSDLRGFGESDAPDGTYSMDLFSDDLIS LLDHLEIEQAVAAGMSMGGYVLFNLLARYPERISGAVFVVTRSVADDEAGRARRLQLATELLTFGPQVVADSFHPLMFAP GTVEARPKLAEEVYDWMVANASRGLAGGLLAMRERPDVTPLLPSITTPSLVIAAEQDKACPLEHPHMIANNISASQLAVI ADAGHLVNLEQPNGFNHCLLEFLRKVAPTALNDGTIGCHC
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27597073, Length=291, Percent_Identity=25.085910652921, Blast_Score=91, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6324392, Length=112, Percent_Identity=33.9285714285714, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30143; Mature: 30143
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAKNAFINGNMIAYDDVGTGPAVMLIHGFPLNRSMWRPQLGDLVAAGYRVITSDLRGFG CCCCCEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ESDAPDGTYSMDLFSDDLISLLDHLEIEQAVAAGMSMGGYVLFNLLARYPERISGAVFVV CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEE TRSVADDEAGRARRLQLATELLTFGPQVVADSFHPLMFAPGTVEARPKLAEEVYDWMVAN EECCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHC ASRGLAGGLLAMRERPDVTPLLPSITTPSLVIAAEQDKACPLEHPHMIANNISASQLAVI CCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHEEEE ADAGHLVNLEQPNGFNHCLLEFLRKVAPTALNDGTIGCHC ECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIAKNAFINGNMIAYDDVGTGPAVMLIHGFPLNRSMWRPQLGDLVAAGYRVITSDLRGFG CCCCCEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ESDAPDGTYSMDLFSDDLISLLDHLEIEQAVAAGMSMGGYVLFNLLARYPERISGAVFVV CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEE TRSVADDEAGRARRLQLATELLTFGPQVVADSFHPLMFAPGTVEARPKLAEEVYDWMVAN EECCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHC ASRGLAGGLLAMRERPDVTPLLPSITTPSLVIAAEQDKACPLEHPHMIANNISASQLAVI CCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHEEEE ADAGHLVNLEQPNGFNHCLLEFLRKVAPTALNDGTIGCHC ECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]