| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is yeiH [C]
Identifier: 189424018
GI number: 189424018
Start: 989169
End: 990101
Strand: Reverse
Name: yeiH [C]
Synonym: Glov_0952
Alternate gene names: 189424018
Gene position: 990101-989169 (Counterclockwise)
Preceding gene: 189424028
Following gene: 189424014
Centisome position: 25.27
GC content: 59.49
Gene sequence:
>933_bases ATGAATGACACCAAGGGATTAAAACTACTGTTCTGGCTCCTGTTGCTGGCCTGCTGCGTACCAATGGTCAGCGCGCCGAT GGCGTTGACCGCAGGGCTCGTCTTCGGCCTGGTGATCGGCAACCCCTGGAAGAACAGTACATCCACCTGGAGCAGACGGT TGTTGCAGGCATCGGTGGTCGGGCTGGGATTCGGTATCAACCTGCCGATGATCCTGCAAACCGGCAAGGACGCTTTTCTC TACACCGCCATCAGCATCAGCTTTACCATGCTGGCAGGCTGGTTGCTGGGCAGGCTGTTCAAGACCCCGCAACGAACCTC GACCCTGATCTCATTCGGCACCGCCATCTGCGGCGGCAGCGCCATTGCTGCCATGGCCCCGGTGATCAGGGCGGAAGGCG AAGAAACCGGGGTTGCCCTGGCAACGGTCTTTACCCTCAACTCCGTTGCCCTGATTCTGTTTCCGCCCCTGGGACACCTG CTGGGGATGGGACAGCAGCAGTTCGGACTCTGGTCTGCCCTGGCGATCCACGACACCAGTAGCGTGGTGGGGGCAGCAGC AGCCTATGGCGAACTGGCGTTGGCCATCGGCACCACCGTGAAACTGACCAGGGCCCTCTGGATCATGCCTTCTGCCCTGC TGGCTGCCTGGTTTACCAAATCAGAAGGCAAGGCCAGGTTTCCGCTTTTTATCATCGGCTTTATTGTTGCTGCAGCCATC AAGACAGCCCTGCCGCAGTTTGAACAGATCTGGCATCCGCTCAACAGCATCGCCAGACAAAGTCTGGTGGTAACCCTGTT CCTGATCGGCAGCGGGCTGACCCGGGAACTGCTGGGAAAGACCGGGCTCAAACCACTGGTTCAGGGGATCACCCTCTGGG TCATTGTCTCTGTGACCAGCGCTGCTGCGATCCTGCTGGGCTGGATCAGCTGA
Upstream 100 bases:
>100_bases GACTGAGACATAACAGTTAGGCGAAGGAGCAAACAGCACGTAACGCAGTAGGCGGCCTCCGCAGTAATTTTGCAAGAGAC TCAGGCACAAGGAGCTGGAG
Downstream 100 bases:
>100_bases CCTGAAATACAAAAGGCCTCTGTCGTTCTGGACAGGGGCCTTTTATACGAGATCCTCGAGTAAAAATCGGAACTACAACT GGCAGGTGGTACTTTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MNDTKGLKLLFWLLLLACCVPMVSAPMALTAGLVFGLVIGNPWKNSTSTWSRRLLQASVVGLGFGINLPMILQTGKDAFL YTAISISFTMLAGWLLGRLFKTPQRTSTLISFGTAICGGSAIAAMAPVIRAEGEETGVALATVFTLNSVALILFPPLGHL LGMGQQQFGLWSALAIHDTSSVVGAAAAYGELALAIGTTVKLTRALWIMPSALLAAWFTKSEGKARFPLFIIGFIVAAAI KTALPQFEQIWHPLNSIARQSLVVTLFLIGSGLTRELLGKTGLKPLVQGITLWVIVSVTSAAAILLGWIS
Sequences:
>Translated_310_residues MNDTKGLKLLFWLLLLACCVPMVSAPMALTAGLVFGLVIGNPWKNSTSTWSRRLLQASVVGLGFGINLPMILQTGKDAFL YTAISISFTMLAGWLLGRLFKTPQRTSTLISFGTAICGGSAIAAMAPVIRAEGEETGVALATVFTLNSVALILFPPLGHL LGMGQQQFGLWSALAIHDTSSVVGAAAAYGELALAIGTTVKLTRALWIMPSALLAAWFTKSEGKARFPLFIIGFIVAAAI KTALPQFEQIWHPLNSIARQSLVVTLFLIGSGLTRELLGKTGLKPLVQGITLWVIVSVTSAAAILLGWIS >Mature_310_residues MNDTKGLKLLFWLLLLACCVPMVSAPMALTAGLVFGLVIGNPWKNSTSTWSRRLLQASVVGLGFGINLPMILQTGKDAFL YTAISISFTMLAGWLLGRLFKTPQRTSTLISFGTAICGGSAIAAMAPVIRAEGEETGVALATVFTLNSVALILFPPLGHL LGMGQQQFGLWSALAIHDTSSVVGAAAAYGELALAIGTTVKLTRALWIMPSALLAAWFTKSEGKARFPLFIIGFIVAAAI KTALPQFEQIWHPLNSIARQSLVVTLFLIGSGLTRELLGKTGLKPLVQGITLWVIVSVTSAAAILLGWIS
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=299, Percent_Identity=28.7625418060201, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 32838; Mature: 32838
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTKGLKLLFWLLLLACCVPMVSAPMALTAGLVFGLVIGNPWKNSTSTWSRRLLQASVV CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GLGFGINLPMILQTGKDAFLYTAISISFTMLAGWLLGRLFKTPQRTSTLISFGTAICGGS HCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCH AIAAMAPVIRAEGEETGVALATVFTLNSVALILFPPLGHLLGMGQQQFGLWSALAIHDTS HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHCCCCHHHHHHHHHEECCCH SVVGAAAAYGELALAIGTTVKLTRALWIMPSALLAAWFTKSEGKARFPLFIIGFIVAAAI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH KTALPQFEQIWHPLNSIARQSLVVTLFLIGSGLTRELLGKTGLKPLVQGITLWVIVSVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH AAAILLGWIS HHHHHHHCCC >Mature Secondary Structure MNDTKGLKLLFWLLLLACCVPMVSAPMALTAGLVFGLVIGNPWKNSTSTWSRRLLQASVV CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GLGFGINLPMILQTGKDAFLYTAISISFTMLAGWLLGRLFKTPQRTSTLISFGTAICGGS HCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCH AIAAMAPVIRAEGEETGVALATVFTLNSVALILFPPLGHLLGMGQQQFGLWSALAIHDTS HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHCCCCHHHHHHHHHEECCCH SVVGAAAAYGELALAIGTTVKLTRALWIMPSALLAAWFTKSEGKARFPLFIIGFIVAAAI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH KTALPQFEQIWHPLNSIARQSLVVTLFLIGSGLTRELLGKTGLKPLVQGITLWVIVSVTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH AAAILLGWIS HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA