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The map label for this gene is trg [C]

Identifier: 189423949

GI number: 189423949

Start: 909041

End: 910663

Strand: Reverse

Name: trg [C]

Synonym: Glov_0882

Alternate gene names: 189423949

Gene position: 910663-909041 (Counterclockwise)

Preceding gene: 189423950

Following gene: 189423948

Centisome position: 23.24

GC content: 40.23

Gene sequence:

>1623_bases
ATGCTTAAAATAAATATTAAAAATAAATTATTGATAGGTTTTACAATAATATTCTCCGCAATTATTTCAATACTTATTAT
ATCTTTATTCCAGCTACACAAACTATCTGAAAACATTAACACTATTGCTTATGACGAAGCACCTAAAATACGTTCTATAT
ACACGATAAATAATAACATAAAAGACATAACGCAAGGATTAAGAAATATCATAATTACCGATGATATCAATATAATGAAG
CGCGAGGCCGATAAATTTTCTGGCATTAGCCAAGAAATAAGTAGCGCAGCCAAGGCTTTAGAAAAAGCCGAATCATCGGC
AAATGGCAAAACAATACTTAAAGAAATGGCAAATCATGGCCTTAAAATAGAGCTACTACACAAAAAATGTCTTGAATATG
CATTGAGCAACGACAAGCATGAAGCAAAAAGCATACTTTTTTCAAAGATTGAGCCCGCCGAAAAAGAATACTTACTTCGC
GTGAAAGCAATGGAAGTGTTTCTATCAAACAGATTTAATGAAACAGCAAAAAATGCAATTTCAATATATAAATTTTCAAG
CTTACTTATCATTGGTGTTGGTGTCGTATCAATATTAATGGGATGCATGGTTGTTTTTCTTGTTGTTATAAACATTATCA
GACCGCTTAGATCCTGTATGCAGGCAGCAGACAATATTGCCACTGGAGACTTAACCATTACTATTAATAGGCGTGCAACT
GATGAAGTTGGTCTGTTTATGATGGCATTAGGCAAAATGGTTGAAAATTTGAAAAATATAGTATCACAGCTAGTTAGCAC
TTCGGCAAGGCTTAGTGTATGCGCAGGACAGCTAGCAGACACTTCAGGCAAAATATTAGCAGACAATGAGGAGATCGCTT
GCCAATTAAATATCTTGGCATCTGCAAGCACTGAAATGGCCGCAACTTCATCAGAGATATCTGCGAGCTGCCTAATGGCT
GCAGACAATGCACACCAAGCAACAAATTCTGCGAAAGAGGGTGTTACCGTTATCAAGACAAACATCGACATTATGGCTCG
TATTGTCGAGCGCGTACACATGGCTTCAACCACAGTCGAACAACTGGGGGCAAGGTCGGATCAAATCGGAACAATAGTGG
GAACCATTGAAGATATTGCAGATCAGACCAACTTGTTGGCACTTAATGCTGCTATAGAAGCTGCACGGGCCGGCGAGCAA
GGACGAGGATTTGCTGTTGTTGCTGATGAAGTACGGGCACTTGCTGAACGCACCACCACAGCGACGCGAGAAATCGGAGA
GATGATTAAGGCAATTCAGCAAGAAACACGCACGGCTGTTAACTCTATGAAAGATGGATCCACAGAAGTTGAGCGTGGGA
CAGAAGGAGTCAACAAATCAAGGCGAGCGCTTGACACCATATTGGACGAGATAAACTCTGTAACAACACAGATAAACCAG
ATTGCAACTGCAGCTACTGAACAGACCGCAACCGCTCAGGAAATTACAAACAACATTCAAAGGATCAGCATGAGCTCACA
GGACCGCATGCAGAATGTACGCACCACAAAGGATTCGGCTCATTTGCTAACTGATCATGCCGAGAACCTGAAGTCATTGG
TAAGGCAATTCAGACTGCCATAG

Upstream 100 bases:

>100_bases
TAAAGTTTAATTACTCATTTTGATTTCCATATTCAGTGCCTGCATACGGAACATGTGTGCAGGCACTGAATGTCTATCAC
AAACACAGGCTAATACTAAT

Downstream 100 bases:

>100_bases
TGAGATCGTGAACGCTCAATCCTATTTTGATGAACAACCTCATTACACCACTATCAAAATGAAAAGCCGTTCACCCAAAA
CGACAGCATAAAACAACCAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MLKINIKNKLLIGFTIIFSAIISILIISLFQLHKLSENINTIAYDEAPKIRSIYTINNNIKDITQGLRNIIITDDINIMK
READKFSGISQEISSAAKALEKAESSANGKTILKEMANHGLKIELLHKKCLEYALSNDKHEAKSILFSKIEPAEKEYLLR
VKAMEVFLSNRFNETAKNAISIYKFSSLLIIGVGVVSILMGCMVVFLVVINIIRPLRSCMQAADNIATGDLTITINRRAT
DEVGLFMMALGKMVENLKNIVSQLVSTSARLSVCAGQLADTSGKILADNEEIACQLNILASASTEMAATSSEISASCLMA
ADNAHQATNSAKEGVTVIKTNIDIMARIVERVHMASTTVEQLGARSDQIGTIVGTIEDIADQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALAERTTTATREIGEMIKAIQQETRTAVNSMKDGSTEVERGTEGVNKSRRALDTILDEINSVTTQINQ
IATAATEQTATAQEITNNIQRISMSSQDRMQNVRTTKDSAHLLTDHAENLKSLVRQFRLP

Sequences:

>Translated_540_residues
MLKINIKNKLLIGFTIIFSAIISILIISLFQLHKLSENINTIAYDEAPKIRSIYTINNNIKDITQGLRNIIITDDINIMK
READKFSGISQEISSAAKALEKAESSANGKTILKEMANHGLKIELLHKKCLEYALSNDKHEAKSILFSKIEPAEKEYLLR
VKAMEVFLSNRFNETAKNAISIYKFSSLLIIGVGVVSILMGCMVVFLVVINIIRPLRSCMQAADNIATGDLTITINRRAT
DEVGLFMMALGKMVENLKNIVSQLVSTSARLSVCAGQLADTSGKILADNEEIACQLNILASASTEMAATSSEISASCLMA
ADNAHQATNSAKEGVTVIKTNIDIMARIVERVHMASTTVEQLGARSDQIGTIVGTIEDIADQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALAERTTTATREIGEMIKAIQQETRTAVNSMKDGSTEVERGTEGVNKSRRALDTILDEINSVTTQINQ
IATAATEQTATAQEITNNIQRISMSSQDRMQNVRTTKDSAHLLTDHAENLKSLVRQFRLP
>Mature_540_residues
MLKINIKNKLLIGFTIIFSAIISILIISLFQLHKLSENINTIAYDEAPKIRSIYTINNNIKDITQGLRNIIITDDINIMK
READKFSGISQEISSAAKALEKAESSANGKTILKEMANHGLKIELLHKKCLEYALSNDKHEAKSILFSKIEPAEKEYLLR
VKAMEVFLSNRFNETAKNAISIYKFSSLLIIGVGVVSILMGCMVVFLVVINIIRPLRSCMQAADNIATGDLTITINRRAT
DEVGLFMMALGKMVENLKNIVSQLVSTSARLSVCAGQLADTSGKILADNEEIACQLNILASASTEMAATSSEISASCLMA
ADNAHQATNSAKEGVTVIKTNIDIMARIVERVHMASTTVEQLGARSDQIGTIVGTIEDIADQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALAERTTTATREIGEMIKAIQQETRTAVNSMKDGSTEVERGTEGVNKSRRALDTILDEINSVTTQINQ
IATAATEQTATAQEITNNIQRISMSSQDRMQNVRTTKDSAHLLTDHAENLKSLVRQFRLP

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=372, Percent_Identity=31.7204301075269, Blast_Score=139, Evalue=6e-34,
Organism=Escherichia coli, GI1788194, Length=414, Percent_Identity=25.8454106280193, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI2367378, Length=307, Percent_Identity=30.2931596091205, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789453, Length=336, Percent_Identity=31.547619047619, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1788195, Length=280, Percent_Identity=33.2142857142857, Blast_Score=112, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58899; Mature: 58899

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKINIKNKLLIGFTIIFSAIISILIISLFQLHKLSENINTIAYDEAPKIRSIYTINNNI
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCH
KDITQGLRNIIITDDINIMKREADKFSGISQEISSAAKALEKAESSANGKTILKEMANHG
HHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
LKIELLHKKCLEYALSNDKHEAKSILFSKIEPAEKEYLLRVKAMEVFLSNRFNETAKNAI
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SIYKFSSLLIIGVGVVSILMGCMVVFLVVINIIRPLRSCMQAADNIATGDLTITINRRAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
DEVGLFMMALGKMVENLKNIVSQLVSTSARLSVCAGQLADTSGKILADNEEIACQLNILA
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCEEEEEEEEC
SASTEMAATSSEISASCLMAADNAHQATNSAKEGVTVIKTNIDIMARIVERVHMASTTVE
CCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHH
QLGARSDQIGTIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTT
HHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATREIGEMIKAIQQETRTAVNSMKDGSTEVERGTEGVNKSRRALDTILDEINSVTTQINQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IATAATEQTATAQEITNNIQRISMSSQDRMQNVRTTKDSAHLLTDHAENLKSLVRQFRLP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKINIKNKLLIGFTIIFSAIISILIISLFQLHKLSENINTIAYDEAPKIRSIYTINNNI
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCH
KDITQGLRNIIITDDINIMKREADKFSGISQEISSAAKALEKAESSANGKTILKEMANHG
HHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
LKIELLHKKCLEYALSNDKHEAKSILFSKIEPAEKEYLLRVKAMEVFLSNRFNETAKNAI
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SIYKFSSLLIIGVGVVSILMGCMVVFLVVINIIRPLRSCMQAADNIATGDLTITINRRAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
DEVGLFMMALGKMVENLKNIVSQLVSTSARLSVCAGQLADTSGKILADNEEIACQLNILA
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEECCCCEEEEEEEEC
SASTEMAATSSEISASCLMAADNAHQATNSAKEGVTVIKTNIDIMARIVERVHMASTTVE
CCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHH
QLGARSDQIGTIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTT
HHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATREIGEMIKAIQQETRTAVNSMKDGSTEVERGTEGVNKSRRALDTILDEINSVTTQINQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IATAATEQTATAQEITNNIQRISMSSQDRMQNVRTTKDSAHLLTDHAENLKSLVRQFRLP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA